RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 MICAL1Q8TDZ2 1067 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 ZNF653Q96CK0 615 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 ARHGEF26Q96DR7 871 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 FUBP3Q96I24 572 aaKnown RBP eCLIP11.56□□□□□ -0.56
BRCC3-204ENST00000369462 SAMD11Q96NU1 681 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 TLR9Q9NR96 1032 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.56□□□□□ -0.56
BRCC3-204ENST00000369462 MYO1AQ9UBC5 1043 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 INTUQ9ULD6 942 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 GUCA1BQ9UMX6 200 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 SLC27A5Q9Y2P5 690 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 MYH10P35580 1976 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 TRANK1O15050 2925 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 ATP8B3O60423 1300 aa11.56□□□□□ -0.56
BRCC3-204ENST00000369462 F8VP50 259 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 XPO1O14980 1071 aaKnown RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 TEX28O15482 410 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CCP110O43303 1012 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 KRT86O43790 486 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CNPP09543 421 aaKnown RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 TMEM253P0C7T8 217 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 RRM1P23921 792 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 GRIK1P39086 918 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 GPC5P78333 572 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 UBE3AQ05086 875 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 C1QBPQ07021 282 aaKnown RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 ADCY1Q08828 1119 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PTP4A2Q12974 167 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 DUSP4Q13115 394 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PLPP4Q5VZY2 271 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PPP1R2P3Q6NXS1 205 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SCN4BQ8IWT1 228 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 TXLNBQ8N3L3 684 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 MSANTD4Q8NCY6 345 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 ZNF461Q8TAF7 563 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 STK32AQ8WU08 396 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 ARNTL2Q8WYA1 636 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 C18orf8Q96DM3 657 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 VCPIP1Q96JH7 1222 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CNOT8Q9UFF9 292 aaKnown RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SSX2IPQ9Y2D8 614 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 NLRC5Q86WI3 1866 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 E5RJQ4 531 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 ARHGAP25P42331 645 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PLA2G4AP47712 749 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SMARCB1Q12824 385 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 GPM6BQ13491 265 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CAMK1Q14012 370 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 GPR65Q8IYL9 337 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SPPL2BQ8TCT7 592 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SLC4A5Q9BY07 1137 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CRISPLD1Q9H336 500 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PRO3102Q9H379 93 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CSNK1G1Q9HCP0 422 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 DMAP1Q9NPF5 467 aaPredicted RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 FNIP2Q9P278 1114 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PCDHGC5Q9Y5F6 944 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PLXNA4Q9HCM2 1894 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 MACROD2A1Z1Q3 448 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 HIDE1A8MVS5 230 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 ESPNB1AK53 854 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 H3BNC9 293 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 PJA2O43164 708 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 GABBR2O75899 941 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 VNN2O95498 520 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 ERBB2P04626 1255 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 CALB1P05937 261 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 MGAT5BQ3V5L5 792 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 TMEM110Q86TL2 294 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 MRPL43Q8N983 215 aaKnown RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 IPO4Q8TEX9 1081 aaKnown RBP11.55□□□□□ -0.56
BRCC3-204ENST00000369462 TRIM11Q96F44 468 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 HSFY1Q96LI6 401 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 RXFP1Q9HBX9 757 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 KCND1Q9NSA2 647 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SALL4Q9UJQ4 1053 aa11.55□□□□□ -0.56
BRCC3-204ENST00000369462 SOAT2O75908 522 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 ABLIM3O94929 683 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 LCP1P13796 627 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 IRS1P35568 1242 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 NDUFV1P49821 464 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 RAB33AQ14088 237 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 DDR2Q16832 855 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 VSTM1Q6UX27 236 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 SEPT5Q99719 369 aaPredicted RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 IRX2Q9BZI1 471 aaPredicted RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 MIS12Q9H081 205 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 LRRC4Q9HBW1 653 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 ABCB6Q9NP58 842 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 NGRNQ9NPE2 291 aaKnown RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 AFF4Q9UHB7 1163 aaKnown RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 PAXBP1Q9Y5B6 917 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 IRAK3Q9Y616 596 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 MYBL1P10243 752 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 ATF2P15336 505 aa11.54□□□□□ -0.56
BRCC3-204ENST00000369462 NOP2P46087 812 aaKnown RBP11.54□□□□□ -0.56
BRCC3-204ENST00000369462 NAP1L1P55209 391 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms