RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 ATP8B4Q8TF62 1192 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 BAP1Q92560 729 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 SIK2Q9H0K1 926 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 RBP3P10745 1247 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 NUP107P57740 925 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 MORF4L2Q15014 288 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 SPDYCQ5MJ68 293 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 LPCAT4Q643R3 524 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 TARS2Q9BW92 718 aaKnown RBP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 ARL8BQ9NVJ2 186 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 SPATA31A1Q5TZJ5 1347 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 ATP9BO43861 1147 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 CBFA2T3O75081 653 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 PAMP19021 973 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 HABP4Q5JVS0 413 aaKnown RBP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 SPIRE2Q8WWL2 714 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 FAM111AQ96PZ2 611 aa16.7■□□□□ 0.26
NPHP3-201ENST00000337331 POP1Q99575 1024 aaKnown RBP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 PSMC3IPQ9P2W1 217 aaPredicted RBP16.7■□□□□ 0.26
NPHP3-201ENST00000337331 WNT7AO00755 349 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 PEX1O43933 1283 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 CST8O60676 142 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 RALAP11233 206 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 EFHC2Q5JST6 749 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 CROCCP3Q8IVE0 287 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 TTC39CQ8N584 583 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 CCDC134Q9H6E4 229 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 MRGBPQ9NV56 204 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 SUN2Q9UH99 717 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 MYO5BQ9ULV0 1848 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 MEI4A8MW99 385 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 BNIP3LO60238 219 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 AKAP3O75969 853 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 C2CD6Q53TS8 623 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 THOC7Q6I9Y2 204 aaKnown RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 UTS2BQ765I0 119 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 CLVS1Q8IUQ0 354 aaPredicted RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 CYP4X1Q8N118 509 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 CADM1Q9BY67 442 aaKnown RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 RPL26L1Q9UNX3 145 aaKnown RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 USP20Q9Y2K6 914 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 MGEA5O60502 916 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 WEE2P0C1S8 567 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 GYS1P13807 737 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 EIF4BP23588 611 aaKnown RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 PRKCEQ02156 737 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 YWHAHQ04917 246 aaPredicted RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 C3orf62Q6ZUJ4 267 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 FAM151AQ8WW52 585 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 AGAP3Q96P47 875 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 PRKAG3Q9UGI9 489 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 ZC3H7BQ9UGR2 993 aaKnown RBP16.69■□□□□ 0.26
NPHP3-201ENST00000337331 NR2E1Q9Y466 385 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 SNX9Q9Y5X1 595 aa16.69■□□□□ 0.26
NPHP3-201ENST00000337331 SPDYE2BA6NHP3 402 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 GRAP2O75791 330 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 FAM58BPP0C7Q3 252 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 SPDYE6P0CI01 402 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 LPIN1Q14693 890 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 OR6P1Q8NGX9 317 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 BRD8Q9H0E9 1235 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 C10orf88Q9H8K7 445 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 AK5Q9Y6K8 562 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ATP8B3O60423 1300 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 UMODL1Q5DID0 1318 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 APOL1O14791 398 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 GSTA4O15217 222 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TCN1P20061 433 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 XPAP23025 273 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 CLNKQ7Z7G1 428 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ZFRQ96KR1 1074 aaKnown RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TTYH3Q9C0H2 523 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 PLGRKTQ9HBL7 147 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ADA2Q9NZK5 511 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ZNF70Q9UC06 446 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TNFAIP8O95379 198 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 ADRA1DP25100 572 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 RPA3P35244 121 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 NCKAP1LP55160 1127 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 HPCAP84074 193 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 SMTNL2Q2TAL5 461 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TCHHL1Q5QJ38 904 aaPredicted RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 GPR141Q7Z602 305 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 POU5F2Q8N7G0 328 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 MEGF6O75095 1541 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 RNF103-CHMP3A0A140T963 221 aa16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TRMUO75648 421 aaKnown RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 TXNP10599 105 aaKnown RBP16.68■□□□□ 0.26
NPHP3-201ENST00000337331 RAG1P15918 1043 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms