RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 CENPCQ03188 943 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 SMARCB1Q12824 385 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 DUSP4Q13115 394 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PDCLQ13371 301 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 RAB33AQ14088 237 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 MGAT5BQ3V5L5 792 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PMF1Q6P1K2 205 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 MMS22LQ6ZRQ5 1243 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ERICH1Q86X53 443 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ZNF461Q8TAF7 563 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ANKRD7Q92527 254 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTSC-201ENST00000227266 PPP1R13BQ96KQ4 1090 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 NOX5Q96PH1 765 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 KLHL5Q96PQ7 755 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 C11orf70Q9BRQ4 267 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PACSIN1Q9BY11 444 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 CRISPLD1Q9H336 500 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ZNF576Q9H609 170 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 AFF4Q9UHB7 1163 aaKnown RBP11.74□□□□□ -0.53
CTSC-201ENST00000227266 NENFQ9UMX5 172 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PPP2R2CQ9Y2T4 447 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 REXO2Q9Y3B8 237 aaKnown RBP11.74□□□□□ -0.53
CTSC-201ENST00000227266 PCDHA13Q9Y5I0 950 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 IRAK3Q9Y616 596 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ADGRG1Q9Y653 693 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 F8VP50 259 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 RTN2O75298 545 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ABLIM3O94929 683 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 LCA5LO95447 670 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ABCB4P21439 1286 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 DDR2Q16832 855 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PRPF38BQ5VTL8 546 aaKnown RBP11.74□□□□□ -0.53
CTSC-201ENST00000227266 SDHAF4Q5VUM1 108 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 TPGS2Q68CL5 300 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PHLDB2Q86SQ0 1253 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 KIAA1328Q86T90 577 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 PIGZQ86VD9 579 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 SPPL2BQ8TCT7 592 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 C2orf15Q8WU43 125 aaKnown RBP11.74□□□□□ -0.53
CTSC-201ENST00000227266 SLC35F5Q8WV83 523 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 CPXM1Q96SM3 734 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ISCUQ9H1K1 167 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 CYP4F11Q9HBI6 524 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 ABCB6Q9NP58 842 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
CTSC-201ENST00000227266 ADAM22Q9P0K1 906 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
CTSC-201ENST00000227266 XPO1O14980 1071 aaKnown RBP11.73□□□□□ -0.53
CTSC-201ENST00000227266 ZSCAN12O43309 604 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 TGM5O43548 720 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 H2AFZP0C0S5 128 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 CCDC175P0C221 793 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 ATF2P15336 505 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 ELF1P32519 619 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 GPR15P49685 360 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 GALCP54803 685 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 PTPN20Q4JDL3 420 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 CYP4A22Q5TCH4 519 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 VSTM1Q6UX27 236 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 H2AFVQ71UI9 128 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 RBM23Q86U06 439 aaKnown RBP11.73□□□□□ -0.53
CTSC-201ENST00000227266 ZMIZ2Q8NF64 920 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
CTSC-201ENST00000227266 TJP2Q9UDY2 1190 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 GBF1Q92538 1859 aa11.73□□□□□ -0.53
CTSC-201ENST00000227266 E5RJQ4 531 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 PRRG1O14668 218 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 PER2O15055 1255 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 CCP110O43303 1012 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 SEC24AO95486 1093 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 GLUD1P00367 558 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 HAPLN1P10915 354 aaPredicted RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 LCP1P13796 627 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 MMP8P22894 467 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 MAGEA11P43364 429 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 PLA2G4AP47712 749 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 C10orf76Q5T2E6 689 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 PDE12Q6L8Q7 609 aaKnown RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 NYAP1Q6ZVC0 841 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 MON1BQ7L1V2 547 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 PHF13Q86YI8 300 aaPredicted RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 MCOLN2Q8IZK6 566 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 MSANTD4Q8NCY6 345 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 IPO4Q8TEX9 1081 aaKnown RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 THAP2Q9H0W7 228 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 CSNK1G1Q9HCP0 422 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 CHORDC1Q9UHD1 332 aaPredicted RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 A0A0U1RQJ8 604 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 TRIM66O15016 1216 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 ATMINO43313 823 aaPredicted RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 ERBB2P04626 1255 aa11.72□□□□□ -0.53
CTSC-201ENST00000227266 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 C1QBPQ07021 282 aaKnown RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 IFRD2Q12894 506 aaPredicted RBP11.72□□□□□ -0.53
CTSC-201ENST00000227266 PTPROQ16827 1216 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms