RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 RPL14BP38754 138 aaKnown RBP1.62□□□□□ -2.15
snR43snR43 POG1P40473 351 aa1.62□□□□□ -2.15
snR43snR43 SMD3P43321 101 aaKnown RBP1.62□□□□□ -2.15
snR43snR43 YGR026WP53217 278 aa1.62□□□□□ -2.15
snR43snR43 DIA1P54005 336 aa1.62□□□□□ -2.15
snR43snR43 YER078W-AQ3E7A2 54 aa1.62□□□□□ -2.15
snR43snR43 DDR48P18899 430 aaKnown RBP1.61□□□□□ -2.15
snR43snR43 SMP1P38128 452 aa1.61□□□□□ -2.15
snR43snR43 CYB5P40312 120 aa1.61□□□□□ -2.15
snR43snR43 ARC15P40518 154 aaRIP-Chip data1.61□□□□□ -2.15not detected
snR43snR43 YFR045WP43617 309 aa1.61□□□□□ -2.15
snR43snR43 ATP19P81451 68 aa1.61□□□□□ -2.15
snR43snR43 YCL001W-AP87012 153 aa1.61□□□□□ -2.15
snR43snR43 MHR1Q06630 226 aa1.61□□□□□ -2.15
snR43snR43 FCF2Q12035 217 aaPredicted RBP1.61□□□□□ -2.15
snR43snR43 PCC1Q3E833 88 aa1.61□□□□□ -2.15
snR43snR43 UBI4P0CG63 381 aaKnown RBP1.6□□□□□ -2.15
snR43snR43 TIR1P10863 254 aa1.6□□□□□ -2.15
snR43snR43 POF1P25576 258 aa1.6□□□□□ -2.15
snR43snR43 FZF1P32805 299 aa1.6□□□□□ -2.15
snR43snR43 SPC25P40014 221 aa1.6□□□□□ -2.15
snR43snR43 PGD1P40356 397 aa1.6□□□□□ -2.15
snR43snR43 RPC10P40422 70 aa1.6□□□□□ -2.15
snR43snR43 TAD2P47058 250 aa1.6□□□□□ -2.15
snR43snR43 MOG1P47123 218 aa1.6□□□□□ -2.15
snR43snR43 SRB7P47822 140 aa1.6□□□□□ -2.15
snR43snR43 ANT1Q06497 328 aa1.6□□□□□ -2.15
snR43snR43 YOR015WQ12169 119 aa1.6□□□□□ -2.15
snR43snR43 YBL112CQ3E7Y4 105 aa1.6□□□□□ -2.15
snR43snR43 RPS22AP0C0W1 130 aaKnown RBP1.59□□□□□ -2.15
snR43snR43 YBL081WP38180 368 aaKnown RBP1.59□□□□□ -2.15
snR43snR43 GCV3P39726 170 aaPredicted RBP1.59□□□□□ -2.15
snR43snR43 YIL163CP40448 117 aa1.59□□□□□ -2.15
snR43snR43 AIM19P40502 157 aa1.59□□□□□ -2.15
snR43snR43 CIN5P40917 295 aa1.59□□□□□ -2.15
snR43snR43 PAU4P53427 120 aa1.59□□□□□ -2.15
snR43snR43 ADD37Q03233 198 aa1.59□□□□□ -2.15
snR43snR43 YOR105WQ08504 108 aa1.59□□□□□ -2.15
snR43snR43 SNU23Q12368 194 aaPredicted RBP1.59□□□□□ -2.15
snR43snR43 PAU1P0CE88 120 aa1.58□□□□□ -2.16
snR43snR43 PAU14P0CE89 120 aa1.58□□□□□ -2.16
snR43snR43 PAU6P0CE90 120 aa1.58□□□□□ -2.16
snR43snR43 PAU18P0CE91 120 aa1.58□□□□□ -2.16
snR43snR43 PAU8P0CE92 120 aa1.58□□□□□ -2.16
snR43snR43 PAU11P0CE93 120 aa1.58□□□□□ -2.16
snR43snR43 MRPL31P14063 131 aaPredicted RBP1.58□□□□□ -2.16
snR43snR43 HYP2P23301 157 aaKnown RBP1.58□□□□□ -2.16
snR43snR43 SRP21P32342 167 aa1.58□□□□□ -2.16
snR43snR43 PAU13P38725 120 aa1.58□□□□□ -2.16
snR43snR43 YHR140WP38842 239 aa1.58□□□□□ -2.16
snR43snR43 HAC1P41546 238 aa1.58□□□□□ -2.16
snR43snR43 PAU10Q03050 120 aa1.58□□□□□ -2.16
snR43snR43 PAU20Q08322 120 aa1.58□□□□□ -2.16
snR43snR43 SME1Q12330 94 aaPredicted RBP1.58□□□□□ -2.16
snR43snR43 COX19Q3E731 98 aa1.58□□□□□ -2.16
snR43snR43 PAU9Q3E770 120 aa1.58□□□□□ -2.16
snR43snR43 MAG1P22134 296 aaKnown RBP1.57□□□□□ -2.16
snR43snR43 RIB5P38145 238 aa1.57□□□□□ -2.16
snR43snR43 YBR090CP38253 122 aa1.57□□□□□ -2.16
snR43snR43 YAL064WP39711 94 aa1.57□□□□□ -2.16
snR43snR43 PEX22P39718 180 aa1.57□□□□□ -2.16
snR43snR43 SDS23P53172 527 aa1.57□□□□□ -2.16
snR43snR43 SNA2P56508 79 aa1.57□□□□□ -2.16
snR43snR43 GPI19Q04082 140 aa1.57□□□□□ -2.16
snR43snR43 TVP18Q04767 167 aa1.57□□□□□ -2.16
snR43snR43 ARC18Q05933 178 aaKnown RBP1.57□□□□□ -2.16
snR43snR43 DXO1Q06349 442 aa1.57□□□□□ -2.16
snR43snR43 ECM12O13529 151 aa1.56□□□□□ -2.16
snR43snR43 ADH2P00331 348 aaKnown RBP1.56□□□□□ -2.16
snR43snR43 RPL27AP0C2H6 136 aaKnown RBP1.56□□□□□ -2.16
snR43snR43 ARO2P28777 376 aaKnown RBP1.56□□□□□ -2.16
snR43snR43 QRI5P32344 111 aa1.56□□□□□ -2.16
snR43snR43 MRPS9P38120 278 aa1.56□□□□□ -2.16
snR43snR43 SHG1P38337 142 aa1.56□□□□□ -2.16
snR43snR43 SRP14P38985 146 aa1.56□□□□□ -2.16
snR43snR43 SEC72P39742 193 aaKnown RBP1.56□□□□□ -2.16
snR43snR43 YER076CP40049 302 aa1.56□□□□□ -2.16
snR43snR43 DCV1P43595 202 aa1.56□□□□□ -2.16
snR43snR43 OST3P48439 350 aa1.56□□□□□ -2.16
snR43snR43 GIM5Q04493 163 aa1.56□□□□□ -2.16
snR43snR43 YLR118CQ12354 227 aa1.56□□□□□ -2.16
snR43snR43 YGL194C-AQ2V2P6 80 aa1.56□□□□□ -2.16
snR43snR43 YMR175W-AQ3E766 64 aa1.56□□□□□ -2.16
snR43snR43 ENV10Q99382 181 aa1.56□□□□□ -2.16
snR43snR43 TRP1P00912 224 aa1.55□□□□□ -2.16
snR43snR43 SAR1P20606 190 aaKnown RBP1.55□□□□□ -2.16
snR43snR43 MSK1P32048 576 aa1.55□□□□□ -2.16
snR43snR43 ZRT1P32804 376 aa1.55□□□□□ -2.16
snR43snR43 YBR219CP38317 127 aa1.55□□□□□ -2.16
snR43snR43 RPB11P38902 120 aa1.55□□□□□ -2.16
snR43snR43 DAN1P47178 298 aa1.55□□□□□ -2.16
snR43snR43 YGL041C-BQ3E750 60 aa1.55□□□□□ -2.16
snR43snR43 CMC4Q3E7A9 73 aa1.55□□□□□ -2.16
snR43snR43 YKR070WP36151 352 aaKnown RBP1.54□□□□□ -2.16
snR43snR43 YAR029WP39549 74 aa1.54□□□□□ -2.16
snR43snR43 VTC1P40046 129 aaRIP-Chip data1.54□□□□□ -2.16not detected
snR43snR43 CSM4Q08955 156 aa1.54□□□□□ -2.16
snR43snR43 YCL001W-BQ96VH2 84 aa1.54□□□□□ -2.16
snR43snR43 YAL065CO13511 128 aa1.53□□□□□ -2.16
snR43snR43 HHF1P02309 103 aaKnown RBP1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms