RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C MOH1P38191 138 aa4.77□□□□□ -1.65
VPS4YPR173C YER181CP40097 107 aa4.77□□□□□ -1.65
VPS4YPR173C YJL213WP40896 331 aa4.77□□□□□ -1.65
VPS4YPR173C IMP2P46972 177 aa4.77□□□□□ -1.65
VPS4YPR173C FCF1Q05498 189 aaPredicted RBP4.77□□□□□ -1.65
VPS4YPR173C PRM3Q08931 133 aa4.77□□□□□ -1.65
VPS4YPR173C TIM22Q12328 207 aa4.77□□□□□ -1.65
VPS4YPR173C DFM1Q12743 341 aaKnown RBP4.77□□□□□ -1.65
VPS4YPR173C ADH5P38113 351 aaKnown RBP4.76□□□□□ -1.65
VPS4YPR173C SNU13P39990 126 aaKnown RBP4.76□□□□□ -1.65
VPS4YPR173C YER076CP40049 302 aa4.76□□□□□ -1.65
VPS4YPR173C RPL15BP54780 204 aaPredicted RBP4.76□□□□□ -1.65
VPS4YPR173C YLR112WQ12130 139 aa4.76□□□□□ -1.65
VPS4YPR173C AQY1P0CD91 305 aa4.75□□□□□ -1.65
VPS4YPR173C CDC43P18898 376 aa4.75□□□□□ -1.65
VPS4YPR173C ATP23P53722 227 aa4.75□□□□□ -1.65
VPS4YPR173C NHP2P32495 156 aaPredicted RBP4.74□□□□□ -1.65
VPS4YPR173C YKL070WP36087 169 aa4.74□□□□□ -1.65
VPS4YPR173C ATX1P38636 73 aa4.74□□□□□ -1.65
VPS4YPR173C GLE2P40066 365 aa4.74□□□□□ -1.65
VPS4YPR173C TOS6P48560 102 aa4.74□□□□□ -1.65
VPS4YPR173C YNL046WP53956 172 aa4.74□□□□□ -1.65
VPS4YPR173C DIA1P54005 336 aa4.74□□□□□ -1.65
VPS4YPR173C MOT3P54785 490 aaKnown RBP4.74□□□□□ -1.65
VPS4YPR173C UBC7Q02159 165 aa4.74□□□□□ -1.65
VPS4YPR173C YPL261CQ08976 102 aa4.74□□□□□ -1.65
VPS4YPR173C SGN1P40561 250 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
VPS4YPR173C OST2P46964 130 aa4.73□□□□□ -1.65
VPS4YPR173C YJL027CP47063 138 aaPredicted RBP4.73□□□□□ -1.65
VPS4YPR173C YTH1Q06102 208 aaPredicted RBP4.73□□□□□ -1.65
VPS4YPR173C YOR097CQ12274 175 aaPredicted RBP4.73□□□□□ -1.65
VPS4YPR173C VAR1P02381 398 aa4.72□□□□□ -1.65
VPS4YPR173C INO4P13902 151 aa4.72□□□□□ -1.65
VPS4YPR173C LDB16P25587 256 aa4.72□□□□□ -1.65
VPS4YPR173C RPL32P38061 130 aaKnown RBP4.72□□□□□ -1.65
VPS4YPR173C YHL037CP38733 133 aa4.72□□□□□ -1.65
VPS4YPR173C CTR2P38865 189 aa4.72□□□□□ -1.65
VPS4YPR173C YNL217WP40152 326 aa4.72□□□□□ -1.65
VPS4YPR173C YDL009CQ12210 107 aa4.72□□□□□ -1.65
VPS4YPR173C COA3Q3E7B2 85 aa4.72□□□□□ -1.65
VPS4YPR173C HMRA2P0CY13 119 aa4.72□□□□□ -1.65
VPS4YPR173C KTI12P34253 313 aaKnown RBP4.72□□□□□ -1.65
VPS4YPR173C MRPL38P35996 138 aaPredicted RBP4.72□□□□□ -1.65
VPS4YPR173C SPI1P40092 148 aa4.72□□□□□ -1.65
VPS4YPR173C YFL051CP43552 160 aa4.72□□□□□ -1.65
VPS4YPR173C SED1Q01589 338 aa4.72□□□□□ -1.65
VPS4YPR173C HPA2Q06592 156 aa4.72□□□□□ -1.65
VPS4YPR173C MSA1Q08471 629 aa4.72□□□□□ -1.65
VPS4YPR173C JID1Q12350 301 aa4.72□□□□□ -1.65
VPS4YPR173C ISD11Q6Q560 94 aa4.72□□□□□ -1.65
VPS4YPR173C IES6P32617 166 aa4.71□□□□□ -1.66
VPS4YPR173C OXA1P39952 402 aa4.71□□□□□ -1.66
VPS4YPR173C YNR077CP53758 84 aa4.71□□□□□ -1.66
VPS4YPR173C YNL234WP53857 426 aa4.71□□□□□ -1.66
VPS4YPR173C YNL092WP53934 400 aa4.71□□□□□ -1.66
VPS4YPR173C LSM6Q06406 86 aaKnown RBP4.71□□□□□ -1.66
VPS4YPR173C YOL160WQ08321 113 aa4.71□□□□□ -1.66
VPS4YPR173C IGO2Q9P305 131 aa4.71□□□□□ -1.66
VPS4YPR173C COX10P21592 462 aa4.7□□□□□ -1.66
VPS4YPR173C AGA1P32323 725 aa4.7□□□□□ -1.66
VPS4YPR173C YEL067CP39978 195 aa4.7□□□□□ -1.66
VPS4YPR173C YAR1P46683 200 aa4.7□□□□□ -1.66
VPS4YPR173C YIP3P53633 176 aa4.7□□□□□ -1.66
VPS4YPR173C YNL184CP53876 108 aa4.7□□□□□ -1.66
VPS4YPR173C YCR075W-AQ3E830 75 aa4.7□□□□□ -1.66
VPS4YPR173C YDL022C-AP0C5L6 82 aa4.69□□□□□ -1.66
VPS4YPR173C POR2P40478 281 aa4.69□□□□□ -1.66
VPS4YPR173C MRPL49P40858 161 aaPredicted RBP4.69□□□□□ -1.66
VPS4YPR173C YFL065CP43539 102 aa4.69□□□□□ -1.66
VPS4YPR173C YFR057WP43625 151 aa4.69□□□□□ -1.66
VPS4YPR173C LCB3P47013 409 aa4.69□□□□□ -1.66
VPS4YPR173C GLO1P50107 326 aa4.69□□□□□ -1.66
VPS4YPR173C DUO1P53168 247 aaKnown RBP4.69□□□□□ -1.66
VPS4YPR173C IRC23Q08416 157 aa4.69□□□□□ -1.66
VPS4YPR173C YPR203WQ08994 102 aa4.69□□□□□ -1.66
VPS4YPR173C YOR008C-AQ3E7B9 74 aa4.69□□□□□ -1.66
VPS4YPR173C RPL42AP0CX27 106 aaKnown RBP4.68□□□□□ -1.66
VPS4YPR173C RPL42BP0CX28 106 aaKnown RBP4.68□□□□□ -1.66
VPS4YPR173C YER121WP40076 114 aa4.68□□□□□ -1.66
VPS4YPR173C YMR181CQ03231 154 aa4.68□□□□□ -1.66
VPS4YPR173C CCW14O13547 238 aa4.67□□□□□ -1.66
VPS4YPR173C YOR304C-AO14468 76 aa4.67□□□□□ -1.66
VPS4YPR173C RPS8AP0CX39 200 aaKnown RBP4.67□□□□□ -1.66
VPS4YPR173C RPS8BP0CX40 200 aaKnown RBP4.67□□□□□ -1.66
VPS4YPR173C YGR219WP53307 113 aa4.67□□□□□ -1.66
VPS4YPR173C AIM11P87275 137 aa4.67□□□□□ -1.66
VPS4YPR173C YLR194CQ05777 254 aa4.67□□□□□ -1.66
VPS4YPR173C PBP4Q07362 185 aaKnown RBP4.67□□□□□ -1.66
VPS4YPR173C FCY1Q12178 158 aa4.67□□□□□ -1.66
VPS4YPR173C MRPL23Q12487 163 aaPredicted RBP4.67□□□□□ -1.66
VPS4YPR173C PHO85P17157 305 aa4.66□□□□□ -1.66
VPS4YPR173C SNA4Q07549 140 aa4.66□□□□□ -1.66
VPS4YPR173C RPA12P32529 125 aaKnown RBP4.65□□□□□ -1.67
VPS4YPR173C VTC1P40046 129 aaRIP-Chip data4.65□□□□□ -1.67not detected
VPS4YPR173C YER085CP40058 173 aa4.65□□□□□ -1.67
VPS4YPR173C RRG8Q06109 277 aa4.65□□□□□ -1.67
VPS4YPR173C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
VPS4YPR173C YCL048W-AQ2V2Q2 79 aa4.65□□□□□ -1.67
VPS4YPR173C NUM1Q00402 2748 aa4.64□□□□□ -1.67
VPS4YPR173C EOS1P53938 366 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 91.7 ms