RNA–Protein interactions for RNA: YPR135W

CTF4, Transcript of Chromatin-associated protein, yeastyeast

Gene CTF4, Length 2,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF4YPR135W PAM17P36147 197 aa1.11□□□□□ -2.23
CTF4YPR135W MPC2P38857 129 aa1.11□□□□□ -2.23
CTF4YPR135W YNL033WP53964 284 aa1.11□□□□□ -2.23
CTF4YPR135W YNL019CP53975 284 aa1.11□□□□□ -2.23
CTF4YPR135W YPR063CQ12160 140 aa1.11□□□□□ -2.23
CTF4YPR135W YLR118CQ12354 227 aa1.11□□□□□ -2.23
CTF4YPR135W YIR021W-AQ3E739 70 aa1.11□□□□□ -2.23
CTF4YPR135W YNL277W-AQ3E7Z0 62 aa1.11□□□□□ -2.23
CTF4YPR135W YOR376W-AQ3E805 51 aa1.11□□□□□ -2.23
CTF4YPR135W AHT1P29589 182 aa1.1□□□□□ -2.23
CTF4YPR135W FZF1P32805 299 aa1.1□□□□□ -2.23
CTF4YPR135W TIM12P32830 109 aa1.1□□□□□ -2.23
CTF4YPR135W ETR1P38071 380 aa1.1□□□□□ -2.23
CTF4YPR135W UMP1P38293 148 aa1.1□□□□□ -2.23
CTF4YPR135W YER135CP40082 130 aa1.1□□□□□ -2.23
CTF4YPR135W YDR114CQ04597 100 aa1.1□□□□□ -2.23
CTF4YPR135W YMR253CQ04835 414 aa1.1□□□□□ -2.23
CTF4YPR135W FCY1Q12178 158 aa1.1□□□□□ -2.23
CTF4YPR135W YOR381W-AQ3E804 55 aa1.1□□□□□ -2.23
CTF4YPR135W MSW1P04803 379 aa1.1□□□□□ -2.23
CTF4YPR135W YER039C-AP0CD97 72 aa1.1□□□□□ -2.23
CTF4YPR135W HSP12P22943 109 aaKnown RBP1.1□□□□□ -2.23
CTF4YPR135W SNC2P33328 115 aa1.1□□□□□ -2.23
CTF4YPR135W YKR032WP36127 104 aa1.1□□□□□ -2.23
CTF4YPR135W NSA2P40078 261 aaKnown RBP1.1□□□□□ -2.23
CTF4YPR135W RNH202Q05635 350 aa1.1□□□□□ -2.23
CTF4YPR135W YOR289WQ12012 251 aaPredicted RBP1.1□□□□□ -2.23
CTF4YPR135W DDI2P0CH63 225 aa1.09□□□□□ -2.23
CTF4YPR135W DDI3P0CH64 225 aa1.09□□□□□ -2.23
CTF4YPR135W YJR146WP47174 117 aa1.09□□□□□ -2.23
CTF4YPR135W YGR026WP53217 278 aa1.09□□□□□ -2.23
CTF4YPR135W APS2Q00381 147 aa1.09□□□□□ -2.23
CTF4YPR135W AIM36Q03798 255 aa1.09□□□□□ -2.23
CTF4YPR135W YDL241WQ07738 123 aa1.09□□□□□ -2.23
CTF4YPR135W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.09□□□□□ -2.23not detected
CTF4YPR135W YLR042CQ07990 161 aa1.09□□□□□ -2.23
CTF4YPR135W AGA2P32781 87 aa1.09□□□□□ -2.24
CTF4YPR135W RGI1P40043 161 aaPredicted RBP1.09□□□□□ -2.24
CTF4YPR135W YNL217WP40152 326 aa1.09□□□□□ -2.24
CTF4YPR135W TMA23Q03525 211 aa1.09□□□□□ -2.24
CTF4YPR135W YMR252CQ04814 134 aa1.09□□□□□ -2.24
CTF4YPR135W IRC23Q08416 157 aa1.09□□□□□ -2.24
CTF4YPR135W FEX1Q08913 375 aa1.09□□□□□ -2.24
CTF4YPR135W YPL225WQ08971 146 aaKnown RBP1.09□□□□□ -2.24
CTF4YPR135W FEX2Q08991 375 aa1.09□□□□□ -2.24
CTF4YPR135W YOR015WQ12169 119 aa1.09□□□□□ -2.24
CTF4YPR135W BOL1Q3E793 110 aa1.09□□□□□ -2.24
CTF4YPR135W YCR050CP25630 102 aa1.08□□□□□ -2.24
CTF4YPR135W YPT31P38555 223 aaKnown RBP1.08□□□□□ -2.24
CTF4YPR135W MPM1P40364 252 aa1.08□□□□□ -2.24
CTF4YPR135W YGR017WP53210 297 aa1.08□□□□□ -2.24
CTF4YPR135W VPS28Q02767 242 aa1.08□□□□□ -2.24
CTF4YPR135W MIX17Q03667 156 aa1.08□□□□□ -2.24
CTF4YPR135W MRPS8Q03799 155 aa1.08□□□□□ -2.24
CTF4YPR135W LCL2Q08045 131 aa1.08□□□□□ -2.24
CTF4YPR135W FYV7Q12247 151 aa1.08□□□□□ -2.24
CTF4YPR135W RAD6P06104 172 aa1.08□□□□□ -2.24
CTF4YPR135W YAL064WP39711 94 aa1.08□□□□□ -2.24
CTF4YPR135W BAT2P47176 376 aaKnown RBP1.08□□□□□ -2.24
CTF4YPR135W ELC1Q03071 99 aa1.08□□□□□ -2.24
CTF4YPR135W SHH3Q04487 196 aa1.08□□□□□ -2.24
CTF4YPR135W COX5BP00425 151 aa1.08□□□□□ -2.24
CTF4YPR135W BUD23P25627 275 aaPredicted RBP1.08□□□□□ -2.24
CTF4YPR135W SCM4P32564 187 aa1.08□□□□□ -2.24
CTF4YPR135W YHL042WP38729 150 aa1.08□□□□□ -2.24
CTF4YPR135W PEP8P40335 379 aa1.08□□□□□ -2.24
CTF4YPR135W PHS1P40857 217 aa1.08□□□□□ -2.24
CTF4YPR135W DAD3P69850 94 aa1.08□□□□□ -2.24
CTF4YPR135W YMR295CQ03559 197 aa1.08□□□□□ -2.24
CTF4YPR135W LIP1Q03579 150 aa1.08□□□□□ -2.24
CTF4YPR135W HRT1Q08273 121 aa1.08□□□□□ -2.24
CTF4YPR135W HUT1Q12520 339 aa1.08□□□□□ -2.24
CTF4YPR135W SOD1P00445 154 aaKnown RBP1.07□□□□□ -2.24
CTF4YPR135W INO4P13902 151 aa1.07□□□□□ -2.24
CTF4YPR135W KRE1P17260 313 aa1.07□□□□□ -2.24
CTF4YPR135W YAR029WP39549 74 aa1.07□□□□□ -2.24
CTF4YPR135W SAY1P53324 424 aa1.07□□□□□ -2.24
CTF4YPR135W SAE3P89114 91 aa1.07□□□□□ -2.24
CTF4YPR135W YOL131WQ08270 108 aa1.07□□□□□ -2.24
CTF4YPR135W YKL018C-AQ3E7A7 99 aa1.07□□□□□ -2.24
CTF4YPR135W SCS22Q6Q595 175 aa1.07□□□□□ -2.24
CTF4YPR135W YLR236CA0A023PZG4 107 aa1.07□□□□□ -2.24
CTF4YPR135W VAR1P02381 398 aa1.07□□□□□ -2.24
CTF4YPR135W SPS2P08459 502 aa1.07□□□□□ -2.24
CTF4YPR135W RIO2P40160 425 aaKnown RBP1.07□□□□□ -2.24
CTF4YPR135W RPL33BP41056 107 aaKnown RBP1.07□□□□□ -2.24
CTF4YPR135W AIM11P87275 137 aa1.07□□□□□ -2.24
CTF4YPR135W COX12Q01519 83 aa1.07□□□□□ -2.24
CTF4YPR135W YPL067CQ02754 198 aa1.07□□□□□ -2.24
CTF4YPR135W UPS1Q05776 175 aa1.07□□□□□ -2.24
CTF4YPR135W YOR385WQ08909 290 aa1.07□□□□□ -2.24
CTF4YPR135W STF2P16965 84 aa1.06□□□□□ -2.24
CTF4YPR135W RPB11P38902 120 aa1.06□□□□□ -2.24
CTF4YPR135W YIL059CP40520 121 aa1.06□□□□□ -2.24
CTF4YPR135W TIR3P40552 269 aa1.06□□□□□ -2.24
CTF4YPR135W DML1Q03652 475 aa1.06□□□□□ -2.24
CTF4YPR135W YPR195CQ06594 109 aa1.06□□□□□ -2.24
CTF4YPR135W RPL26AP05743 127 aaKnown RBP1.06□□□□□ -2.24
CTF4YPR135W FMT1P32785 401 aa1.06□□□□□ -2.24
CTF4YPR135W DIE2P50076 525 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 690.6 ms