RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W FCY1Q12178 158 aa2.47□□□□□ -2.01
BUD21YOR078W YOR097CQ12274 175 aaPredicted RBP2.47□□□□□ -2.01
BUD21YOR078W YPS3Q12303 508 aa2.47□□□□□ -2.01
BUD21YOR078W YPR064WQ12492 139 aa2.47□□□□□ -2.01
BUD21YOR078W YMR316C-AI2HB70 103 aa2.46□□□□□ -2.02
BUD21YOR078W YLR302CO13544 120 aa2.46□□□□□ -2.02
BUD21YOR078W RPL2AP0CX45 254 aaKnown RBP2.46□□□□□ -2.02
BUD21YOR078W RPL2BP0CX46 254 aaKnown RBP2.46□□□□□ -2.02
BUD21YOR078W RPS16AP0CX51 143 aaKnown RBP2.46□□□□□ -2.02
BUD21YOR078W RPS16BP0CX52 143 aaKnown RBP2.46□□□□□ -2.02
BUD21YOR078W OM14P38325 134 aa2.46□□□□□ -2.02
BUD21YOR078W YHR140WP38842 239 aa2.46□□□□□ -2.02
BUD21YOR078W MRPL49P40858 161 aaPredicted RBP2.46□□□□□ -2.02
BUD21YOR078W COX12Q01519 83 aa2.46□□□□□ -2.02
BUD21YOR078W MRX11Q03079 207 aa2.46□□□□□ -2.02
BUD21YOR078W YDR042CQ03205 200 aa2.46□□□□□ -2.02
BUD21YOR078W YLR012CQ07927 99 aa2.46□□□□□ -2.02
BUD21YOR078W YHR139C-AO13536 103 aa2.45□□□□□ -2.02
BUD21YOR078W FZF1P32805 299 aa2.45□□□□□ -2.02
BUD21YOR078W GPI18P38211 433 aa2.45□□□□□ -2.02
BUD21YOR078W YHL018WP38744 120 aaPredicted RBP2.45□□□□□ -2.02
BUD21YOR078W GGC1P38988 300 aa2.45□□□□□ -2.02
BUD21YOR078W PAU7P39545 55 aa2.45□□□□□ -2.02
BUD21YOR078W MMS2P53152 137 aa2.45□□□□□ -2.02
BUD21YOR078W YGR164WP53291 111 aa2.45□□□□□ -2.02
BUD21YOR078W HST4P53688 370 aa2.45□□□□□ -2.02
BUD21YOR078W ATP19P81451 68 aa2.45□□□□□ -2.02
BUD21YOR078W TIM18Q08749 192 aa2.45□□□□□ -2.02
BUD21YOR078W YPL038W-AQ3E7B4 63 aa2.45□□□□□ -2.02
BUD21YOR078W YNL277W-AQ3E7Z0 62 aa2.45□□□□□ -2.02
BUD21YOR078W YLR365WQ7LIF2 110 aa2.45□□□□□ -2.02
BUD21YOR078W LAA1P39526 2014 aa2.45□□□□□ -2.02
BUD21YOR078W BNI1P41832 1953 aa2.45□□□□□ -2.02
BUD21YOR078W SRX1P36077 127 aa2.44□□□□□ -2.02
BUD21YOR078W SMP1P38128 452 aa2.44□□□□□ -2.02
BUD21YOR078W SFT2P38166 215 aa2.44□□□□□ -2.02
BUD21YOR078W CSH1P38287 376 aa2.44□□□□□ -2.02
BUD21YOR078W SVP26P38869 228 aa2.44□□□□□ -2.02
BUD21YOR078W SFT1P43682 97 aa2.44□□□□□ -2.02
BUD21YOR078W FIP1P45976 327 aa2.44□□□□□ -2.02
BUD21YOR078W VPS55P47111 140 aa2.44□□□□□ -2.02
BUD21YOR078W MST27P53176 234 aa2.44□□□□□ -2.02
BUD21YOR078W PET191Q02772 108 aa2.44□□□□□ -2.02
BUD21YOR078W YDR102CQ03864 110 aa2.44□□□□□ -2.02
BUD21YOR078W MSA1Q08471 629 aa2.44□□□□□ -2.02
BUD21YOR078W RLM1Q12224 676 aa2.44□□□□□ -2.02
BUD21YOR078W YPR108W-AQ3E7B3 70 aa2.44□□□□□ -2.02
BUD21YOR078W HUG1Q6Q5K6 68 aa2.44□□□□□ -2.02
BUD21YOR078W Q0255P03881 472 aa2.43□□□□□ -2.02
BUD21YOR078W PIS1P06197 220 aaKnown RBP2.43□□□□□ -2.02
BUD21YOR078W BET1P22804 142 aa2.43□□□□□ -2.02
BUD21YOR078W HSP12P22943 109 aaKnown RBP2.43□□□□□ -2.02
BUD21YOR078W IMP1P28627 190 aa2.43□□□□□ -2.02
BUD21YOR078W YRA2P36036 203 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
BUD21YOR078W DSE2P38844 325 aa2.43□□□□□ -2.02
BUD21YOR078W YHR173CP38864 112 aa2.43□□□□□ -2.02
BUD21YOR078W TIM17P39515 158 aa2.43□□□□□ -2.02
BUD21YOR078W YAR029WP39549 74 aa2.43□□□□□ -2.02
BUD21YOR078W PEX22P39718 180 aa2.43□□□□□ -2.02
BUD21YOR078W RRT13P40042 185 aa2.43□□□□□ -2.02
BUD21YOR078W YNL217WP40152 326 aa2.43□□□□□ -2.02
BUD21YOR078W LST8P41318 303 aa2.43□□□□□ -2.02
BUD21YOR078W OST1P41543 476 aaKnown RBP2.43□□□□□ -2.02
BUD21YOR078W CIS3P47001 227 aa2.43□□□□□ -2.02
BUD21YOR078W YGR050CP53231 118 aa2.43□□□□□ -2.02
BUD21YOR078W YGR219WP53307 113 aa2.43□□□□□ -2.02
BUD21YOR078W HSK3P69852 69 aa2.43□□□□□ -2.02
BUD21YOR078W YDR209CQ03480 137 aa2.43□□□□□ -2.02
BUD21YOR078W KSH1Q8TGJ3 72 aa2.43□□□□□ -2.02
BUD21YOR078W MRPL31P14063 131 aaPredicted RBP2.42□□□□□ -2.02
BUD21YOR078W TOM40P23644 387 aaKnown RBP2.42□□□□□ -2.02
BUD21YOR078W RPL32P38061 130 aaKnown RBP2.42□□□□□ -2.02
BUD21YOR078W MBB1P39534 108 aa2.42□□□□□ -2.02
BUD21YOR078W YER079WP40052 210 aaKnown RBP2.42□□□□□ -2.02
BUD21YOR078W HAL1Q01766 294 aa2.42□□□□□ -2.02
BUD21YOR078W YMR321CQ04898 105 aa2.42□□□□□ -2.02
BUD21YOR078W SHH4Q06236 168 aa2.42□□□□□ -2.02
BUD21YOR078W RPL18AP0CX49 186 aaKnown RBP2.41□□□□□ -2.02
BUD21YOR078W RPL18BP0CX50 186 aaKnown RBP2.41□□□□□ -2.02
BUD21YOR078W ROX3P25046 220 aa2.41□□□□□ -2.02
BUD21YOR078W FPR2P32472 135 aa2.41□□□□□ -2.02
BUD21YOR078W YSY6P38374 65 aa2.41□□□□□ -2.02
BUD21YOR078W LYS1P38998 373 aaRIP-Chip data2.41□□□□□ -2.02not detected
BUD21YOR078W YFL067WP43537 175 aa2.41□□□□□ -2.02
BUD21YOR078W YFL051CP43552 160 aa2.41□□□□□ -2.02
BUD21YOR078W NCA3P46955 337 aa2.41□□□□□ -2.02
BUD21YOR078W RRS1Q08746 203 aaKnown RBP2.41□□□□□ -2.02
BUD21YOR078W YPL261CQ08976 102 aa2.41□□□□□ -2.02
BUD21YOR078W EMC6Q12431 108 aa2.41□□□□□ -2.02
BUD21YOR078W YDR381C-AQ3E6R5 114 aa2.41□□□□□ -2.02
BUD21YOR078W RPL28P02406 149 aaKnown RBP2.4□□□□□ -2.03
BUD21YOR078W YHR180WP38868 163 aa2.4□□□□□ -2.03
BUD21YOR078W YIA6P40556 373 aa2.4□□□□□ -2.03
BUD21YOR078W EAF6P47128 113 aa2.4□□□□□ -2.03
BUD21YOR078W RSM19P53733 91 aaPredicted RBP2.4□□□□□ -2.03
BUD21YOR078W PIR1Q03178 341 aa2.4□□□□□ -2.03
BUD21YOR078W GAT3Q07928 141 aa2.4□□□□□ -2.03
BUD21YOR078W IGO2Q9P305 131 aa2.4□□□□□ -2.03
BUD21YOR078W RPS8AP0CX39 200 aaKnown RBP2.39□□□□□ -2.03
BUD21YOR078W RPS8BP0CX40 200 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms