RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W RTR2Q12378 196 aa1.23□□□□□ -2.21
PEP12YOR036W GTT2Q12390 233 aa1.23□□□□□ -2.21
PEP12YOR036W YOR376W-AQ3E805 51 aa1.23□□□□□ -2.21
PEP12YOR036W FUN14P18411 198 aa1.22□□□□□ -2.21
PEP12YOR036W HYP2P23301 157 aaKnown RBP1.22□□□□□ -2.21
PEP12YOR036W YKL044WP36092 106 aa1.22□□□□□ -2.21
PEP12YOR036W YBR027CP38220 110 aa1.22□□□□□ -2.21
PEP12YOR036W YAR029WP39549 74 aa1.22□□□□□ -2.21
PEP12YOR036W YFL051CP43552 160 aa1.22□□□□□ -2.21
PEP12YOR036W YFR035CP43608 114 aa1.22□□□□□ -2.21
PEP12YOR036W YGL149WP53116 101 aa1.22□□□□□ -2.21
PEP12YOR036W YPL067CQ02754 198 aa1.22□□□□□ -2.21
PEP12YOR036W FYV7Q12247 151 aa1.22□□□□□ -2.21
PEP12YOR036W MHF1Q3E835 90 aa1.22□□□□□ -2.21
PEP12YOR036W HAP1P0CE41 1502 aa1.21□□□□□ -2.22
PEP12YOR036W YRF1-2P40105 1681 aa1.21□□□□□ -2.22
PEP12YOR036W BUD23P25627 275 aaPredicted RBP1.21□□□□□ -2.22
PEP12YOR036W SNF11P38956 169 aa1.21□□□□□ -2.22
PEP12YOR036W YGR164WP53291 111 aa1.21□□□□□ -2.22
PEP12YOR036W YMR007WQ03675 126 aa1.21□□□□□ -2.22
PEP12YOR036W GPI19Q04082 140 aa1.21□□□□□ -2.22
PEP12YOR036W BEM2P39960 2167 aaKnown RBP1.21□□□□□ -2.22
PEP12YOR036W YRF1-3P0CX14 1859 aa1.2□□□□□ -2.22
PEP12YOR036W YRF1-7P0CX15 1859 aa1.2□□□□□ -2.22
PEP12YOR036W YRF1-6P53819 1859 aa1.2□□□□□ -2.22
PEP12YOR036W HAP3P13434 144 aa1.2□□□□□ -2.22
PEP12YOR036W MRPL11P36521 249 aaPredicted RBP1.2□□□□□ -2.22
PEP12YOR036W SEN15Q04675 128 aa1.2□□□□□ -2.22
PEP12YOR036W LCL2Q08045 131 aa1.2□□□□□ -2.22
PEP12YOR036W VAM10Q08474 114 aa1.2□□□□□ -2.22
PEP12YOR036W UBR2Q07963 1872 aa1.2□□□□□ -2.22
PEP12YOR036W UTP10P42945 1769 aaKnown RBP1.19□□□□□ -2.22
PEP12YOR036W RTC6O14464 93 aa1.19□□□□□ -2.22
PEP12YOR036W AIM18P38884 321 aa1.19□□□□□ -2.22
PEP12YOR036W GNA1P43577 159 aaPredicted RBP1.19□□□□□ -2.22
PEP12YOR036W SED1Q01589 338 aa1.19□□□□□ -2.22
PEP12YOR036W YPL225WQ08971 146 aaKnown RBP1.19□□□□□ -2.22
PEP12YOR036W CCW12Q12127 133 aa1.19□□□□□ -2.22
PEP12YOR036W OCA6Q12454 224 aa1.19□□□□□ -2.22
PEP12YOR036W SPO14P36126 1683 aa1.19□□□□□ -2.22
PEP12YOR036W ULS1Q08562 1619 aa1.18□□□□□ -2.22
PEP12YOR036W IRC20Q06554 1556 aa1.18□□□□□ -2.22
PEP12YOR036W RPL36BO14455 100 aaKnown RBP1.18□□□□□ -2.22
PEP12YOR036W RPL36AP05745 100 aaPredicted RBP1.18□□□□□ -2.22
PEP12YOR036W PFY1P07274 126 aa1.18□□□□□ -2.22
PEP12YOR036W YHR213WP0CI67 198 aa1.18□□□□□ -2.22
PEP12YOR036W EMP24P32803 203 aaKnown RBP1.18□□□□□ -2.22
PEP12YOR036W YBR090CP38253 122 aa1.18□□□□□ -2.22
PEP12YOR036W TDA2P40045 126 aa1.18□□□□□ -2.22
PEP12YOR036W YLR296WQ05898 108 aa1.18□□□□□ -2.22
PEP12YOR036W YLR365WQ7LIF2 110 aa1.18□□□□□ -2.22
PEP12YOR036W FAS2P19097 1887 aaKnown RBP1.18□□□□□ -2.22
PEP12YOR036W PDR10P51533 1564 aa1.17□□□□□ -2.22
PEP12YOR036W CYR1P08678 2026 aaKnown RBP1.17□□□□□ -2.22
PEP12YOR036W XRN1P22147 1528 aaKnown RBP1.17□□□□□ -2.22
PEP12YOR036W RPL33AP05744 107 aaKnown RBP1.17□□□□□ -2.22
PEP12YOR036W YGL014C-AP0C5N1 53 aa1.17□□□□□ -2.22
PEP12YOR036W RPL40AP0CH08 128 aaKnown RBP1.17□□□□□ -2.22
PEP12YOR036W RPL40BP0CH09 128 aaKnown RBP1.17□□□□□ -2.22
PEP12YOR036W YAR064WP39563 99 aa1.17□□□□□ -2.22
PEP12YOR036W YEA6P39953 335 aa1.17□□□□□ -2.22
PEP12YOR036W YER187WP40102 141 aa1.17□□□□□ -2.22
PEP12YOR036W LST8P41318 303 aa1.17□□□□□ -2.22
PEP12YOR036W YMR103CQ04436 120 aa1.17□□□□□ -2.22
PEP12YOR036W YPL261CQ08976 102 aa1.17□□□□□ -2.22
PEP12YOR036W MED11Q99278 115 aa1.17□□□□□ -2.22
PEP12YOR036W SSK2P53599 1579 aa1.17□□□□□ -2.22
PEP12YOR036W MMS1Q06211 1407 aa1.16□□□□□ -2.22
PEP12YOR036W RPO21P04050 1733 aaKnown RBP1.16□□□□□ -2.22
PEP12YOR036W HAP2P06774 265 aa1.16□□□□□ -2.22
PEP12YOR036W YJL197C-AP0C5P0 93 aa1.16□□□□□ -2.22
PEP12YOR036W UBC5P15732 148 aa1.16□□□□□ -2.22
PEP12YOR036W HUA1P40325 198 aa1.16□□□□□ -2.22
PEP12YOR036W YMR122CQ03879 124 aa1.16□□□□□ -2.22
PEP12YOR036W ZEO1Q08245 113 aa1.16□□□□□ -2.22
PEP12YOR036W OST5Q92316 86 aa1.16□□□□□ -2.22
PEP12YOR036W YCL001W-BQ96VH2 84 aa1.16□□□□□ -2.22
PEP12YOR036W TY4B-HP0C2J7 1802 aa1.16□□□□□ -2.22
PEP12YOR036W SCC2Q04002 1493 aa1.16□□□□□ -2.22
PEP12YOR036W YCF1P39109 1515 aaKnown RBP1.15□□□□□ -2.22
PEP12YOR036W YHR130CP38834 111 aa1.15□□□□□ -2.23
PEP12YOR036W YIL102CP40488 101 aa1.15□□□□□ -2.23
PEP12YOR036W GTT1P40582 234 aa1.15□□□□□ -2.23
PEP12YOR036W PAU12P53343 120 aa1.15□□□□□ -2.23
PEP12YOR036W NHP10Q03435 203 aa1.15□□□□□ -2.23
PEP12YOR036W SWC7Q06707 132 aa1.15□□□□□ -2.23
PEP12YOR036W DAD1Q12248 94 aa1.15□□□□□ -2.23
PEP12YOR036W LYS2P07702 1392 aa1.15□□□□□ -2.23
PEP12YOR036W FKS3Q04952 1785 aa1.15□□□□□ -2.23
PEP12YOR036W SIN3P22579 1536 aa1.15□□□□□ -2.23
PEP12YOR036W LTE1P07866 1435 aa1.15□□□□□ -2.23
PEP12YOR036W MLP2P40457 1679 aa1.14□□□□□ -2.23
PEP12YOR036W PEP1P32319 1579 aa1.14□□□□□ -2.23
PEP12YOR036W KRE5P22023 1365 aa1.14□□□□□ -2.23
PEP12YOR036W YOL013W-AP0C272 63 aaPredicted RBP1.14□□□□□ -2.23
PEP12YOR036W HUR1P45820 110 aa1.14□□□□□ -2.23
PEP12YOR036W RPL22BP56628 122 aaKnown RBP1.14□□□□□ -2.23
PEP12YOR036W YIL014C-AQ02598 104 aa1.14□□□□□ -2.23
PEP12YOR036W YLR194CQ05777 254 aa1.14□□□□□ -2.23
PEP12YOR036W COA4Q05809 96 aa1.14□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms