RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W GRH1Q04410 372 aaKnown RBP2.86□□□□□ -1.95
ROD1YOR018W ARC18Q05933 178 aaKnown RBP2.86□□□□□ -1.95
ROD1YOR018W ATP16Q12165 160 aa2.86□□□□□ -1.95
ROD1YOR018W SSS1P35179 80 aa2.85□□□□□ -1.95
ROD1YOR018W WIP1Q2V2P8 89 aa2.85□□□□□ -1.95
ROD1YOR018W YIL134C-AQ45U18 67 aa2.85□□□□□ -1.95
ROD1YOR018W YPR014CQ6B0W2 109 aa2.85□□□□□ -1.95
ROD1YOR018W SCS22Q6Q595 175 aa2.85□□□□□ -1.95
ROD1YOR018W PRE1P22141 198 aaKnown RBP2.85□□□□□ -1.95
ROD1YOR018W RPL16BP26785 198 aaKnown RBP2.85□□□□□ -1.95
ROD1YOR018W GSP1P32835 219 aaKnown RBP2.85□□□□□ -1.95
ROD1YOR018W GSP2P32836 220 aaKnown RBP2.85□□□□□ -1.95
ROD1YOR018W YBR144CP34215 104 aa2.85□□□□□ -1.95
ROD1YOR018W YJL028WP47062 111 aa2.85□□□□□ -1.95
ROD1YOR018W TIM22Q12328 207 aa2.85□□□□□ -1.95
ROD1YOR018W HMRA1P0CY11 126 aa2.84□□□□□ -1.95
ROD1YOR018W YCR001WP25347 104 aa2.84□□□□□ -1.95
ROD1YOR018W ACP1P32463 125 aa2.84□□□□□ -1.95
ROD1YOR018W UTR5P32630 166 aa2.84□□□□□ -1.95
ROD1YOR018W OST3P48439 350 aa2.84□□□□□ -1.95
ROD1YOR018W CCW12Q12127 133 aa2.84□□□□□ -1.95
ROD1YOR018W YBR200W-AQ3E755 54 aa2.84□□□□□ -1.95
ROD1YOR018W YLR342W-AQ3E810 57 aa2.84□□□□□ -1.95
ROD1YOR018W MRPL20P22354 195 aaPredicted RBP2.84□□□□□ -1.96
ROD1YOR018W UIP3P39547 235 aa2.84□□□□□ -1.96
ROD1YOR018W RRT13P40042 185 aa2.84□□□□□ -1.96
ROD1YOR018W ALG13P53178 202 aa2.84□□□□□ -1.96
ROD1YOR018W BRP1P53194 125 aa2.84□□□□□ -1.96
ROD1YOR018W YDR274CP87283 123 aa2.84□□□□□ -1.96
ROD1YOR018W YIL014C-AQ02598 104 aa2.84□□□□□ -1.96
ROD1YOR018W YPT53P36019 220 aa2.83□□□□□ -1.96
ROD1YOR018W MPC2P38857 129 aa2.83□□□□□ -1.96
ROD1YOR018W VHS2P40463 436 aa2.83□□□□□ -1.96
ROD1YOR018W DIA1P54005 336 aa2.83□□□□□ -1.96
ROD1YOR018W RDS3Q06835 107 aaPredicted RBP2.83□□□□□ -1.96
ROD1YOR018W Q0255P03881 472 aa2.83□□□□□ -1.96
ROD1YOR018W AUA1P32450 94 aa2.83□□□□□ -1.96
ROD1YOR018W IRC22P40006 225 aa2.83□□□□□ -1.96
ROD1YOR018W CDC40P40968 455 aaPredicted RBP2.83□□□□□ -1.96
ROD1YOR018W VAR1P02381 398 aa2.82□□□□□ -1.96
ROD1YOR018W YRA2P36036 203 aaKnown RBP RIP-Chip data2.82□□□□□ -1.96not detected
ROD1YOR018W YHR140WP38842 239 aa2.82□□□□□ -1.96
ROD1YOR018W GTO3Q04806 366 aa2.82□□□□□ -1.96
ROD1YOR018W PAU7P39545 55 aa2.82□□□□□ -1.96
ROD1YOR018W ATP23P53722 227 aa2.82□□□□□ -1.96
ROD1YOR018W PKR1Q03880 122 aaKnown RBP2.82□□□□□ -1.96
ROD1YOR018W GPI19Q04082 140 aa2.82□□□□□ -1.96
ROD1YOR018W YLR042CQ07990 161 aa2.82□□□□□ -1.96
ROD1YOR018W RPL27AP0C2H6 136 aaKnown RBP2.81□□□□□ -1.96
ROD1YOR018W MRPL11P36521 249 aaPredicted RBP2.81□□□□□ -1.96
ROD1YOR018W YGL088WP53151 121 aa2.81□□□□□ -1.96
ROD1YOR018W CUE4Q04201 117 aaPredicted RBP2.81□□□□□ -1.96
ROD1YOR018W TEM1P38987 245 aa2.81□□□□□ -1.96
ROD1YOR018W KEG1P43614 200 aa2.81□□□□□ -1.96
ROD1YOR018W KTI12P34253 313 aaKnown RBP2.8□□□□□ -1.96
ROD1YOR018W COX12Q01519 83 aa2.8□□□□□ -1.96
ROD1YOR018W SAL1D6W196 494 aa2.8□□□□□ -1.96
ROD1YOR018W RPL12AP0CX53 165 aaKnown RBP2.8□□□□□ -1.96
ROD1YOR018W RPL12BP0CX54 165 aa2.8□□□□□ -1.96
ROD1YOR018W YCR023CP25351 611 aa2.8□□□□□ -1.96
ROD1YOR018W SUR2P38992 349 aa2.8□□□□□ -1.96
ROD1YOR018W POP3P53833 195 aaPredicted RBP2.8□□□□□ -1.96
ROD1YOR018W UPS3Q04006 179 aa2.8□□□□□ -1.96
ROD1YOR018W YDL022C-AP0C5L6 82 aa2.79□□□□□ -1.96
ROD1YOR018W HOT13P36078 116 aa2.79□□□□□ -1.96
ROD1YOR018W SEC72P39742 193 aaKnown RBP2.79□□□□□ -1.96
ROD1YOR018W AIM34Q03673 198 aa2.79□□□□□ -1.96
ROD1YOR018W TVP18Q04767 167 aa2.79□□□□□ -1.96
ROD1YOR018W YPR063CQ12160 140 aa2.79□□□□□ -1.96
ROD1YOR018W RPS22BQ3E7Y3 130 aaKnown RBP2.79□□□□□ -1.96
ROD1YOR018W RPL2AP0CX45 254 aaKnown RBP2.79□□□□□ -1.96
ROD1YOR018W RPL2BP0CX46 254 aaKnown RBP2.79□□□□□ -1.96
ROD1YOR018W YLR281CQ05863 155 aa2.79□□□□□ -1.96
ROD1YOR018W RPS11AP0CX47 156 aaKnown RBP2.78□□□□□ -1.96
ROD1YOR018W RPS11BP0CX48 156 aaKnown RBP2.78□□□□□ -1.96
ROD1YOR018W CDC43P18898 376 aa2.78□□□□□ -1.96
ROD1YOR018W YNL217WP40152 326 aa2.78□□□□□ -1.96
ROD1YOR018W NAT5Q08689 176 aa2.78□□□□□ -1.96
ROD1YOR018W YPL162CQ12042 273 aa2.78□□□□□ -1.96
ROD1YOR018W POM33Q12164 279 aa2.78□□□□□ -1.96
ROD1YOR018W RPL16AP26784 199 aaKnown RBP2.78□□□□□ -1.96
ROD1YOR018W FYV4P38783 130 aaPredicted RBP2.78□□□□□ -1.96
ROD1YOR018W KRE9P39005 276 aa2.78□□□□□ -1.96
ROD1YOR018W YPS5P53057 165 aa2.78□□□□□ -1.96
ROD1YOR018W TPT1Q12272 230 aaKnown RBP2.78□□□□□ -1.96
ROD1YOR018W UTP23Q12339 254 aaKnown RBP2.78□□□□□ -1.96
ROD1YOR018W DFM1Q12743 341 aaKnown RBP2.78□□□□□ -1.96
ROD1YOR018W HMRA2P0CY13 119 aa2.77□□□□□ -1.97
ROD1YOR018W YBR209WP38311 105 aa2.77□□□□□ -1.97
ROD1YOR018W DCV1P43595 202 aa2.77□□□□□ -1.97
ROD1YOR018W YDR366CP87287 132 aa2.77□□□□□ -1.97
ROD1YOR018W DGA1Q08650 418 aa2.77□□□□□ -1.97
ROD1YOR018W YER076CP40049 302 aa2.77□□□□□ -1.97
ROD1YOR018W DPP1Q05521 289 aa2.77□□□□□ -1.97
ROD1YOR018W SCM4P32564 187 aa2.76□□□□□ -1.97
ROD1YOR018W YER085CP40058 173 aa2.76□□□□□ -1.97
ROD1YOR018W YGL118CP53132 145 aa2.76□□□□□ -1.97
ROD1YOR018W MGR2Q02889 113 aa2.76□□□□□ -1.97
ROD1YOR018W SEC11P15367 167 aa2.76□□□□□ -1.97
ROD1YOR018W FUN14P18411 198 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms