RNA–Protein interactions for RNA: YNL251C

NRD1, Transcript of RNA-binding subunit of Nrd1 complex, yeast

Gene NRD1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NRD1	YNL251C	RPL32	P38061	130 aa	Known RBP	4.26	□□□□□ -1.73
NRD1	YNL251C	YBL071C	P38185	102 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	YNL217W	P40152	326 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	CWP2	P43497	92 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	YGR045C	P53229	120 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	SDC1	Q03323	175 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	FCF1	Q05498	189 aa	Predicted RBP	4.26	□□□□□ -1.73
NRD1	YNL251C	RPS14A	P06367	137 aa	Known RBP	4.26	□□□□□ -1.73
NRD1	YNL251C	AQY1	P0CD91	305 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	YKL070W	P36087	169 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	MIC12	P38341	106 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	RPS14B	P39516	138 aa	Known RBP	4.26	□□□□□ -1.73
NRD1	YNL251C	LTP1	P40347	161 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	RPL15B	P54780	204 aa	Predicted RBP	4.26	□□□□□ -1.73
NRD1	YNL251C	GPI19	Q04082	140 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	MIX14	Q04341	121 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	YTH1	Q06102	208 aa	Predicted RBP	4.26	□□□□□ -1.73
NRD1	YNL251C	RRG8	Q06109	277 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	ENV10	Q99382	181 aa		4.26	□□□□□ -1.73
NRD1	YNL251C	PFY1	P07274	126 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	YDL022C-A	P0C5L6	82 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	YCR085W	P25650	117 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	YER076C	P40049	302 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	ECO1	P43605	281 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	ATP23	P53722	227 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	RRS1	Q08746	203 aa	Known RBP	4.25	□□□□□ -1.73
NRD1	YNL251C	FCY1	Q12178	158 aa		4.25	□□□□□ -1.73
NRD1	YNL251C	HMRA2	P0CY13	119 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	BET2	P20133	325 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	VMA11	P32842	164 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	TIR2	P33890	251 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	FIP1	P45976	327 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	DUO1	P53168	247 aa	Known RBP	4.24	□□□□□ -1.73
NRD1	YNL251C	SWS2	P53937	143 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	COX12	Q01519	83 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	YDR119W-A	Q2V2P9	66 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	IGO2	Q9P305	131 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	YHR140W	P38842	239 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	YIL059C	P40520	121 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	SKI6	P46948	246 aa	Predicted RBP	4.24	□□□□□ -1.73
NRD1	YNL251C	GON7	P46984	123 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	SBH2	P52871	88 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	ABF2	Q02486	183 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	COA3	Q3E7B2	85 aa		4.24	□□□□□ -1.73
NRD1	YNL251C	YLR415C	O13578	112 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	DSE2	P38844	325 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	MBB1	P39534	108 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	YER121W	P40076	114 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	MRPL49	P40858	161 aa	Predicted RBP	4.23	□□□□□ -1.73
NRD1	YNL251C	TOS6	P48560	102 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	YOR376W	Q08900	122 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	TIM22	Q12328	207 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	YLR342W-A	Q3E810	57 aa		4.23	□□□□□ -1.73
NRD1	YNL251C	DIF1	O13577	133 aa		4.22	□□□□□ -1.73
NRD1	YNL251C	Q0255	P03881	472 aa		4.22	□□□□□ -1.73
NRD1	YNL251C	MID2	P36027	376 aa		4.22	□□□□□ -1.73
NRD1	YNL251C	NRG2	P38082	220 aa		4.22	□□□□□ -1.73
NRD1	YNL251C	YIL046W-A	Q3E7Z4	54 aa		4.22	□□□□□ -1.73
NRD1	YNL251C	YPR053C	Q6Q5F3	151 aa		4.22	□□□□□ -1.73
NRD1	YNL251C	AGA1	P32323	725 aa		4.21	□□□□□ -1.73
NRD1	YNL251C	VTC1	P40046	129 aa	RIP-Chip data	4.21	□□□□□ -1.73	not detected
NRD1	YNL251C	VHS2	P40463	436 aa		4.21	□□□□□ -1.73
NRD1	YNL251C	YFL051C	P43552	160 aa		4.21	□□□□□ -1.73
NRD1	YNL251C	VPS55	P47111	140 aa		4.21	□□□□□ -1.73
NRD1	YNL251C	YIP1	P53039	248 aa		4.21	□□□□□ -1.73
NRD1	YNL251C	COF1	Q03048	143 aa	Known RBP	4.21	□□□□□ -1.73
NRD1	YNL251C	YDR114C	Q04597	100 aa		4.21	□□□□□ -1.73
NRD1	YNL251C	ECM12	O13529	151 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	YER039C-A	P0CD97	72 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	YHR213W	P0CI67	198 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	YER085C	P40058	173 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	LCB3	P47013	409 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	KNH1	P50112	268 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	YLR194C	Q05777	254 aa		4.21	□□□□□ -1.74
NRD1	YNL251C	YHR139C-A	O13536	103 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	RPS8A	P0CX39	200 aa	Known RBP	4.2	□□□□□ -1.74
NRD1	YNL251C	RPS8B	P0CX40	200 aa	Known RBP	4.2	□□□□□ -1.74
NRD1	YNL251C	YCR006C	P25350	157 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	YER084W	P40057	128 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	SPI1	P40092	148 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	YIA6	P40556	373 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	CAX4	P53223	239 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	AIM11	P87275	137 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	YMR181C	Q03231	154 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	MRPL23	Q12487	163 aa	Predicted RBP	4.2	□□□□□ -1.74
NRD1	YNL251C	YCL021W-A	Q96VH3	125 aa		4.2	□□□□□ -1.74
NRD1	YNL251C	UBC5	P15732	148 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	IMG2	P25642	146 aa	Predicted RBP	4.19	□□□□□ -1.74
NRD1	YNL251C	YHL042W	P38729	150 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	MTC6	P38849	526 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	YFL015C	P43578	164 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	IMP2	P46972	177 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	YMR317W	Q04893	1140 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	RXT3	Q07458	294 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	VPS13	Q07878	3144 aa		4.19	□□□□□ -1.74
NRD1	YNL251C	KTI12	P34253	313 aa	Known RBP	4.18	□□□□□ -1.74
NRD1	YNL251C	MRPL39	P36533	70 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	YDR029W	Q12111	104 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	YOR032W-A	Q8TGS1	66 aa		4.18	□□□□□ -1.74
NRD1	YNL251C	YKL097C	P34245	136 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms