RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A VMA7P39111 118 aa1.99□□□□□ -2.09
YSF3YNL138W-A YPL073CP40323 161 aa1.99□□□□□ -2.09
YSF3YNL138W-A LST8P41318 303 aa1.99□□□□□ -2.09
YSF3YNL138W-A SER2P42941 309 aa1.99□□□□□ -2.09
YSF3YNL138W-A GPI14P47088 403 aaKnown RBP1.99□□□□□ -2.09
YSF3YNL138W-A YJR111CP47148 283 aaKnown RBP1.99□□□□□ -2.09
YSF3YNL138W-A THI74Q04083 370 aa1.99□□□□□ -2.09
YSF3YNL138W-A YMR320WQ04897 101 aa1.99□□□□□ -2.09
YSF3YNL138W-A SLO1Q3E784 85 aa1.99□□□□□ -2.09
YSF3YNL138W-A YOR011W-AQ3E807 68 aa1.99□□□□□ -2.09
YSF3YNL138W-A YFR032C-BQ8TGU2 87 aa1.99□□□□□ -2.09
YSF3YNL138W-A ODC2Q99297 307 aa1.99□□□□□ -2.09
YSF3YNL138W-A YOR304C-AO14468 76 aa1.98□□□□□ -2.09
YSF3YNL138W-A Q0255P03881 472 aa1.98□□□□□ -2.09
YSF3YNL138W-A RPL2AP0CX45 254 aaKnown RBP1.98□□□□□ -2.09
YSF3YNL138W-A RPL2BP0CX46 254 aaKnown RBP1.98□□□□□ -2.09
YSF3YNL138W-A YHR125WP38831 101 aa1.98□□□□□ -2.09
YSF3YNL138W-A SNU13P39990 126 aaKnown RBP1.98□□□□□ -2.09
YSF3YNL138W-A YJR015WP47090 510 aa1.98□□□□□ -2.09
YSF3YNL138W-A YGR017WP53210 297 aa1.98□□□□□ -2.09
YSF3YNL138W-A HHO1P53551 258 aa1.98□□□□□ -2.09
YSF3YNL138W-A APS2Q00381 147 aa1.98□□□□□ -2.09
YSF3YNL138W-A GRX5Q02784 150 aa1.98□□□□□ -2.09
YSF3YNL138W-A MEU1Q07938 337 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
YSF3YNL138W-A RPL26AP05743 127 aaKnown RBP1.97□□□□□ -2.09
YSF3YNL138W-A MRP49P32388 137 aa1.97□□□□□ -2.09
YSF3YNL138W-A YBL010CP32788 280 aa1.97□□□□□ -2.09
YSF3YNL138W-A SNC2P33328 115 aa1.97□□□□□ -2.09
YSF3YNL138W-A MRPL24P36525 258 aaPredicted RBP1.97□□□□□ -2.09
YSF3YNL138W-A UMP1P38293 148 aa1.97□□□□□ -2.09
YSF3YNL138W-A GNA1P43577 159 aaPredicted RBP1.97□□□□□ -2.09
YSF3YNL138W-A YGR025WP53216 100 aa1.97□□□□□ -2.09
YSF3YNL138W-A RPL26BP53221 127 aaKnown RBP1.97□□□□□ -2.09
YSF3YNL138W-A NMA1Q06178 401 aaKnown RBP1.97□□□□□ -2.09
YSF3YNL138W-A YAR023CD6VPM8 179 aa1.96□□□□□ -2.1
YSF3YNL138W-A ATP5P09457 212 aa1.96□□□□□ -2.1
YSF3YNL138W-A ATP15P21306 62 aa1.96□□□□□ -2.1
YSF3YNL138W-A RPB7P34087 171 aa1.96□□□□□ -2.1
YSF3YNL138W-A PAN3P36102 679 aaPredicted RBP1.96□□□□□ -2.1
YSF3YNL138W-A YER181CP40097 107 aa1.96□□□□□ -2.1
YSF3YNL138W-A GVP36P40531 326 aaKnown RBP1.96□□□□□ -2.1
YSF3YNL138W-A ORM1P53224 222 aa1.96□□□□□ -2.1
YSF3YNL138W-A ARL3Q02804 198 aa1.96□□□□□ -2.1
YSF3YNL138W-A MRPS8Q03799 155 aa1.96□□□□□ -2.1
YSF3YNL138W-A YDR010CQ12426 110 aa1.96□□□□□ -2.1
YSF3YNL138W-A SFK1P35735 353 aa1.95□□□□□ -2.1
YSF3YNL138W-A SHB17P36136 271 aaKnown RBP1.95□□□□□ -2.1
YSF3YNL138W-A NSA2P40078 261 aaKnown RBP1.95□□□□□ -2.1
YSF3YNL138W-A POR2P40478 281 aa1.95□□□□□ -2.1
YSF3YNL138W-A YFL019CP43576 117 aa1.95□□□□□ -2.1
YSF3YNL138W-A TOM7P53507 60 aa1.95□□□□□ -2.1
YSF3YNL138W-A FCF2Q12035 217 aaPredicted RBP1.95□□□□□ -2.1
YSF3YNL138W-A YML100W-AQ8TGT0 57 aa1.95□□□□□ -2.1
YSF3YNL138W-A RPS11AP0CX47 156 aaKnown RBP1.94□□□□□ -2.1
YSF3YNL138W-A RPS11BP0CX48 156 aaKnown RBP1.94□□□□□ -2.1
YSF3YNL138W-A FCY21P40039 528 aa1.94□□□□□ -2.1
YSF3YNL138W-A GLC8P41818 229 aa1.94□□□□□ -2.1
YSF3YNL138W-A DIE2P50076 525 aa1.94□□□□□ -2.1
YSF3YNL138W-A YMR252CQ04814 134 aa1.94□□□□□ -2.1
YSF3YNL138W-A NAT3Q06504 195 aa1.94□□□□□ -2.1
YSF3YNL138W-A YOL014WQ08110 124 aa1.94□□□□□ -2.1
YSF3YNL138W-A BOL1Q3E793 110 aa1.94□□□□□ -2.1
YSF3YNL138W-A YDR034C-AP0C289 58 aa1.93□□□□□ -2.1
YSF3YNL138W-A YHR032W-AP0C5N6 59 aa1.93□□□□□ -2.1
YSF3YNL138W-A TIR1P10863 254 aa1.93□□□□□ -2.1
YSF3YNL138W-A DDR48P18899 430 aaKnown RBP1.93□□□□□ -2.1
YSF3YNL138W-A SRP21P32342 167 aa1.93□□□□□ -2.1
YSF3YNL138W-A SCM4P32564 187 aa1.93□□□□□ -2.1
YSF3YNL138W-A VTC1P40046 129 aaRIP-Chip data1.93□□□□□ -2.1not detected
YSF3YNL138W-A YER135CP40082 130 aa1.93□□□□□ -2.1
YSF3YNL138W-A PGD1P40356 397 aa1.93□□□□□ -2.1
YSF3YNL138W-A PAM16P42949 149 aa1.93□□□□□ -2.1
YSF3YNL138W-A GPI2P46961 280 aa1.93□□□□□ -2.1
YSF3YNL138W-A VPS28Q02767 242 aa1.93□□□□□ -2.1
YSF3YNL138W-A YMR295CQ03559 197 aa1.93□□□□□ -2.1
YSF3YNL138W-A RUB1Q03919 77 aa1.93□□□□□ -2.1
YSF3YNL138W-A SHH3Q04487 196 aa1.93□□□□□ -2.1
YSF3YNL138W-A YPL225WQ08971 146 aaKnown RBP1.93□□□□□ -2.1
YSF3YNL138W-A FSF1Q12029 327 aaKnown RBP1.93□□□□□ -2.1
YSF3YNL138W-A YLL066W-BQ8TGJ7 56 aa1.93□□□□□ -2.1
YSF3YNL138W-A FMP49A0A023PZB3 126 aa1.92□□□□□ -2.1
YSF3YNL138W-A RAD6P06104 172 aa1.92□□□□□ -2.1
YSF3YNL138W-A YGL041W-AP0C5N3 154 aa1.92□□□□□ -2.1
YSF3YNL138W-A FYV4P38783 130 aaPredicted RBP1.92□□□□□ -2.1
YSF3YNL138W-A SNF11P38956 169 aa1.92□□□□□ -2.1
YSF3YNL138W-A DAN1P47178 298 aa1.92□□□□□ -2.1
YSF3YNL138W-A AIM11P87275 137 aa1.92□□□□□ -2.1
YSF3YNL138W-A FYV7Q12247 151 aa1.92□□□□□ -2.1
YSF3YNL138W-A YIR021W-AQ3E739 70 aa1.92□□□□□ -2.1
YSF3YNL138W-A YNL146C-AQ3E7Z1 64 aa1.92□□□□□ -2.1
YSF3YNL138W-A COX9P07255 59 aa1.91□□□□□ -2.1
YSF3YNL138W-A HSP12P22943 109 aaKnown RBP1.91□□□□□ -2.1
YSF3YNL138W-A CSH1P38287 376 aa1.91□□□□□ -2.1
YSF3YNL138W-A HTD2P38790 280 aaKnown RBP1.91□□□□□ -2.1
YSF3YNL138W-A DOC1P53068 250 aa1.91□□□□□ -2.1
YSF3YNL138W-A SYM1Q06563 197 aa1.91□□□□□ -2.1
YSF3YNL138W-A YLR099W-AQ3E798 87 aa1.91□□□□□ -2.1
YSF3YNL138W-A YNL277W-AQ3E7Z0 62 aa1.91□□□□□ -2.1
YSF3YNL138W-A POR1P04840 283 aaKnown RBP1.9□□□□□ -2.11
YSF3YNL138W-A UGX2P32772 223 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms