RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP188	YML103C	RPL22B	P56628	122 aa	Known RBP	0.68	□□□□□ -2.3
NUP188	YML103C	YMR321C	Q04898	105 aa		0.68	□□□□□ -2.3
NUP188	YML103C	PRM3	Q08931	133 aa		0.68	□□□□□ -2.3
NUP188	YML103C	SNN1	P48232	102 aa		0.67	□□□□□ -2.3
NUP188	YML103C	YGR164W	P53291	111 aa		0.67	□□□□□ -2.3
NUP188	YML103C	ADK1	P07170	222 aa	Known RBP	0.67	□□□□□ -2.3
NUP188	YML103C	YAR029W	P39549	74 aa		0.67	□□□□□ -2.3
NUP188	YML103C	YER137C	P40083	148 aa	Known RBP	0.67	□□□□□ -2.3
NUP188	YML103C	GNA1	P43577	159 aa	Predicted RBP	0.67	□□□□□ -2.3
NUP188	YML103C	HSL1	P34244	1518 aa		0.67	□□□□□ -2.3
NUP188	YML103C	CYB5	P40312	120 aa		0.67	□□□□□ -2.3
NUP188	YML103C	GAT4	P40569	121 aa		0.67	□□□□□ -2.3
NUP188	YML103C	ROM2	P51862	1356 aa	Known RBP	0.67	□□□□□ -2.3
NUP188	YML103C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.66	□□□□□ -2.3
NUP188	YML103C	MIC27	P50945	234 aa		0.66	□□□□□ -2.3
NUP188	YML103C	YLR194C	Q05777	254 aa		0.66	□□□□□ -2.3
NUP188	YML103C	RTC6	O14464	93 aa		0.66	□□□□□ -2.3
NUP188	YML103C	EMP24	P32803	203 aa	Known RBP	0.66	□□□□□ -2.3
NUP188	YML103C	RPS12	P48589	143 aa	Known RBP	0.66	□□□□□ -2.3
NUP188	YML103C	FIT3	Q08907	204 aa		0.66	□□□□□ -2.3
NUP188	YML103C	YPL225W	Q08971	146 aa	Known RBP	0.66	□□□□□ -2.3
NUP188	YML103C	YLR422W	Q06409	1932 aa		0.66	□□□□□ -2.3
NUP188	YML103C	ZEO1	Q08245	113 aa		0.66	□□□□□ -2.3
NUP188	YML103C	OCA6	Q12454	224 aa		0.66	□□□□□ -2.3
NUP188	YML103C	HUR1	P45820	110 aa		0.66	□□□□□ -2.3
NUP188	YML103C	VPS55	P47111	140 aa		0.66	□□□□□ -2.3
NUP188	YML103C	PCC1	Q3E833	88 aa		0.66	□□□□□ -2.3
NUP188	YML103C	YSF3	P0C074	85 aa	Predicted RBP	0.65	□□□□□ -2.3
NUP188	YML103C	YBR013C	P38215	129 aa		0.65	□□□□□ -2.3
NUP188	YML103C	YHR138C	P38841	114 aa	Predicted RBP	0.65	□□□□□ -2.3
NUP188	YML103C	YMR090W	Q04304	227 aa	Known RBP	0.65	□□□□□ -2.3
NUP188	YML103C	YJL197C-A	P0C5P0	93 aa		0.65	□□□□□ -2.31
NUP188	YML103C	YER187W	P40102	141 aa		0.65	□□□□□ -2.31
NUP188	YML103C	YMR141C	P40211	102 aa		0.65	□□□□□ -2.31
NUP188	YML103C	YFR035C	P43608	114 aa		0.65	□□□□□ -2.31
NUP188	YML103C	YCL048W-A	Q2V2Q2	79 aa		0.65	□□□□□ -2.31
NUP188	YML103C	YLR365W	Q7LIF2	110 aa		0.65	□□□□□ -2.31
NUP188	YML103C	LHP1	P33399	275 aa	Known RBP	0.65	□□□□□ -2.31
NUP188	YML103C	YHR130C	P38834	111 aa		0.65	□□□□□ -2.31
NUP188	YML103C	HHY1	P39982	102 aa		0.65	□□□□□ -2.31
NUP188	YML103C	FAS1	P07149	2051 aa	Known RBP	0.65	□□□□□ -2.31
NUP188	YML103C	TRS20	P38334	175 aa		0.65	□□□□□ -2.31
NUP188	YML103C	POR2	P40478	281 aa		0.65	□□□□□ -2.31
NUP188	YML103C	YGR240C-A	Q3E786	66 aa		0.65	□□□□□ -2.31
NUP188	YML103C	UBR2	Q07963	1872 aa		0.64	□□□□□ -2.31
NUP188	YML103C	YIL163C	P40448	117 aa		0.64	□□□□□ -2.31
NUP188	YML103C	HUA1	P40325	198 aa		0.64	□□□□□ -2.31
NUP188	YML103C	YOS1	Q3E834	85 aa		0.64	□□□□□ -2.31
NUP188	YML103C	PAU19	P0CE85	124 aa		0.64	□□□□□ -2.31
NUP188	YML103C	HMRA2	P0CY13	119 aa		0.64	□□□□□ -2.31
NUP188	YML103C	PAU3	P25610	124 aa		0.64	□□□□□ -2.31
NUP188	YML103C	AIM4	P38305	123 aa	Predicted RBP	0.64	□□□□□ -2.31
NUP188	YML103C	EMC5	P40540	141 aa		0.64	□□□□□ -2.31
NUP188	YML103C	HUG1	Q6Q5K6	68 aa		0.64	□□□□□ -2.31
NUP188	YML103C	DNA2	P38859	1522 aa		0.63	□□□□□ -2.31
NUP188	YML103C	DUR1,2	P32528	1835 aa	Known RBP	0.63	□□□□□ -2.31
NUP188	YML103C	YOR376W-A	Q3E805	51 aa		0.63	□□□□□ -2.31
NUP188	YML103C	TSC11	P40061	1430 aa		0.63	□□□□□ -2.31
NUP188	YML103C	GEA2	P39993	1459 aa	Known RBP	0.63	□□□□□ -2.31
NUP188	YML103C	SNA2	P56508	79 aa		0.63	□□□□□ -2.31
NUP188	YML103C	YER188C-A	P0C0V2	99 aa		0.63	□□□□□ -2.31
NUP188	YML103C	YEA6	P39953	335 aa		0.63	□□□□□ -2.31
NUP188	YML103C	YOL118C	Q08259	102 aa		0.63	□□□□□ -2.31
NUP188	YML103C	BUD4	P47136	1447 aa		0.62	□□□□□ -2.31
NUP188	YML103C	YER039C-A	P0CD97	72 aa		0.62	□□□□□ -2.31
NUP188	YML103C	LSM6	Q06406	86 aa	Known RBP	0.62	□□□□□ -2.31
NUP188	YML103C	BEM2	P39960	2167 aa	Known RBP	0.62	□□□□□ -2.31
NUP188	YML103C	RPL37A	P49166	88 aa	Known RBP	0.62	□□□□□ -2.31
NUP188	YML103C	RIF1	P29539	1916 aa		0.62	□□□□□ -2.31
NUP188	YML103C	GEA1	P47102	1408 aa	Predicted RBP	0.62	□□□□□ -2.31
NUP188	YML103C	YBR090C	P38253	122 aa		0.62	□□□□□ -2.31
NUP188	YML103C	PAU12	P53343	120 aa		0.62	□□□□□ -2.31
NUP188	YML103C	YLR285C-A	Q3E771	56 aa		0.62	□□□□□ -2.31
NUP188	YML103C	CAT8	P39113	1433 aa		0.62	□□□□□ -2.31
NUP188	YML103C	RPL43A	P0CX25	92 aa	Known RBP	0.62	□□□□□ -2.31
NUP188	YML103C	RPL43B	P0CX26	92 aa		0.62	□□□□□ -2.31
NUP188	YML103C	MRP17	P28778	131 aa		0.62	□□□□□ -2.31
NUP188	YML103C	PAU16	P35994	123 aa		0.62	□□□□□ -2.31
NUP188	YML103C	COX23	P38824	151 aa		0.62	□□□□□ -2.31
NUP188	YML103C	PAU15	P40585	124 aa		0.62	□□□□□ -2.31
NUP188	YML103C	YJR128W	P47162	119 aa		0.62	□□□□□ -2.31
NUP188	YML103C	YMR103C	Q04436	120 aa		0.62	□□□□□ -2.31
NUP188	YML103C	IMP2	P46972	177 aa		0.61	□□□□□ -2.31
NUP188	YML103C	YPL038W-A	Q3E7B4	63 aa		0.61	□□□□□ -2.31
NUP188	YML103C	MHF2	Q3E829	80 aa		0.61	□□□□□ -2.31
NUP188	YML103C	BUD23	P25627	275 aa	Predicted RBP	0.61	□□□□□ -2.31
NUP188	YML103C	RPL37B	P51402	88 aa	Known RBP	0.61	□□□□□ -2.31
NUP188	YML103C	COX12	Q01519	83 aa		0.61	□□□□□ -2.31
NUP188	YML103C	SUS1	Q6WNK7	96 aa		0.61	□□□□□ -2.31
NUP188	YML103C	REV3	P14284	1504 aa		0.61	□□□□□ -2.31
NUP188	YML103C	CYR1	P08678	2026 aa	Known RBP	0.61	□□□□□ -2.31
NUP188	YML103C	PDX3	P38075	228 aa	Known RBP	0.6	□□□□□ -2.31
NUP188	YML103C	GCV3	P39726	170 aa	Predicted RBP	0.6	□□□□□ -2.31
NUP188	YML103C	MIX14	Q04341	121 aa		0.6	□□□□□ -2.31
NUP188	YML103C	YCR095W-A	Q3E787	52 aa		0.6	□□□□□ -2.31
NUP188	YML103C	KRE5	P22023	1365 aa		0.6	□□□□□ -2.31
NUP188	YML103C	UBR1	P19812	1950 aa		0.6	□□□□□ -2.31
NUP188	YML103C	YCR101C	P25607	182 aa		0.6	□□□□□ -2.31
NUP188	YML103C	PAU2	P32612	120 aa		0.6	□□□□□ -2.31
NUP188	YML103C	SNU13	P39990	126 aa	Known RBP	0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms