RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C EMC4P53073 190 aa0.51□□□□□ -2.33
SGD1YLR336C URA2P07259 2214 aaKnown RBP0.5□□□□□ -2.33
SGD1YLR336C SNQ2P32568 1501 aaKnown RBP0.5□□□□□ -2.33
SGD1YLR336C GDB1Q06625 1536 aa0.5□□□□□ -2.33
SGD1YLR336C ANB1P19211 157 aa0.5□□□□□ -2.33
SGD1YLR336C VPS15P22219 1454 aa0.5□□□□□ -2.33
SGD1YLR336C MVB12P42939 101 aa0.5□□□□□ -2.33
SGD1YLR336C TY3B-GQ99315 1547 aa0.49□□□□□ -2.33
SGD1YLR336C MRPL44P19956 98 aa0.49□□□□□ -2.33
SGD1YLR336C YLR296WQ05898 108 aa0.49□□□□□ -2.33
SGD1YLR336C FIT3Q08907 204 aa0.49□□□□□ -2.33
SGD1YLR336C TY1B-NL2Q99337 1749 aaKnown RBP0.49□□□□□ -2.33
SGD1YLR336C HUG1Q6Q5K6 68 aa0.49□□□□□ -2.33
SGD1YLR336C VTH1P40438 1549 aa0.49□□□□□ -2.33
SGD1YLR336C VTH2P40890 1549 aa0.49□□□□□ -2.33
SGD1YLR336C RPL43AP0CX25 92 aaKnown RBP0.48□□□□□ -2.33
SGD1YLR336C RPL43BP0CX26 92 aa0.48□□□□□ -2.33
SGD1YLR336C RPC19P28000 142 aaKnown RBP0.48□□□□□ -2.33
SGD1YLR336C YBR013CP38215 129 aa0.48□□□□□ -2.33
SGD1YLR336C KTI11Q3E840 82 aa0.48□□□□□ -2.33
SGD1YLR336C ATG2P53855 1592 aa0.48□□□□□ -2.33
SGD1YLR336C MRPL11P36521 249 aaPredicted RBP0.48□□□□□ -2.33
SGD1YLR336C NUP192P47054 1683 aa0.48□□□□□ -2.33
SGD1YLR336C MIC27P50945 234 aa0.48□□□□□ -2.33
SGD1YLR336C TVP18Q04767 167 aa0.48□□□□□ -2.33
SGD1YLR336C GTT2Q12390 233 aa0.48□□□□□ -2.33
SGD1YLR336C YLR307C-AQ3E825 87 aa0.48□□□□□ -2.33
SGD1YLR336C YSF3P0C074 85 aaPredicted RBP0.47□□□□□ -2.33
SGD1YLR336C AIM18P38884 321 aa0.47□□□□□ -2.33
SGD1YLR336C ELC1Q03071 99 aa0.47□□□□□ -2.33
SGD1YLR336C CSN9Q03981 162 aa0.47□□□□□ -2.33
SGD1YLR336C PDR5P33302 1511 aaKnown RBP0.47□□□□□ -2.33
SGD1YLR336C SDH7Q04401 133 aa0.47□□□□□ -2.33
SGD1YLR336C USO1P25386 1790 aa0.47□□□□□ -2.33
SGD1YLR336C PAU21P0CE86 164 aa0.46□□□□□ -2.34
SGD1YLR336C PAU22P0CE87 164 aa0.46□□□□□ -2.34
SGD1YLR336C CYC2P38909 366 aa0.46□□□□□ -2.34
SGD1YLR336C COA6Q3E846 104 aa0.46□□□□□ -2.34
SGD1YLR336C PFY1P07274 126 aa0.46□□□□□ -2.34
SGD1YLR336C YOR034C-AQ3E735 80 aa0.46□□□□□ -2.34
SGD1YLR336C RSF2P46974 1380 aa0.46□□□□□ -2.34
SGD1YLR336C YLR157W-EP0CF00 54 aa0.45□□□□□ -2.34
SGD1YLR336C HSP10P38910 106 aa0.45□□□□□ -2.34
SGD1YLR336C PHS1P40857 217 aa0.45□□□□□ -2.34
SGD1YLR336C YNL277W-AQ3E7Z0 62 aa0.45□□□□□ -2.34
SGD1YLR336C HAP3P13434 144 aa0.44□□□□□ -2.34
SGD1YLR336C HYM1P32464 399 aa0.44□□□□□ -2.34
SGD1YLR336C PRS3P38689 320 aaKnown RBP0.44□□□□□ -2.34
SGD1YLR336C YPK9Q12697 1472 aa0.44□□□□□ -2.34
SGD1YLR336C GIM4P40005 111 aaKnown RBP0.44□□□□□ -2.34
SGD1YLR336C TY4B-JP47024 1803 aa0.43□□□□□ -2.34
SGD1YLR336C GSP1P32835 219 aaKnown RBP0.43□□□□□ -2.34
SGD1YLR336C TIM8P57744 87 aa0.43□□□□□ -2.34
SGD1YLR336C SPO14P36126 1683 aa0.43□□□□□ -2.34
SGD1YLR336C RIM15P43565 1770 aa0.43□□□□□ -2.34
SGD1YLR336C SFT1P43682 97 aa0.43□□□□□ -2.34
SGD1YLR336C LDB18Q07887 179 aa0.43□□□□□ -2.34
SGD1YLR336C YOR097CQ12274 175 aaPredicted RBP0.43□□□□□ -2.34
SGD1YLR336C YLR361C-AQ3E795 98 aa0.43□□□□□ -2.34
SGD1YLR336C RPS20P38701 121 aaKnown RBP0.42□□□□□ -2.34
SGD1YLR336C YGR017WP53210 297 aa0.42□□□□□ -2.34
SGD1YLR336C YMR321CQ04898 105 aa0.42□□□□□ -2.34
SGD1YLR336C YLR194CQ05777 254 aa0.42□□□□□ -2.34
SGD1YLR336C TCB3Q03640 1545 aaKnown RBP0.42□□□□□ -2.34
SGD1YLR336C YIL163CP40448 117 aa0.42□□□□□ -2.34
SGD1YLR336C YDR278CQ05612 105 aa0.42□□□□□ -2.34
SGD1YLR336C SUA7P29055 345 aaPredicted RBP0.41□□□□□ -2.34
SGD1YLR336C GAT4P40569 121 aa0.41□□□□□ -2.34
SGD1YLR336C YGL204CP53089 101 aa0.41□□□□□ -2.34
SGD1YLR336C FCF2Q12035 217 aaPredicted RBP0.41□□□□□ -2.34
SGD1YLR336C ATP14Q12349 124 aa0.41□□□□□ -2.34
SGD1YLR336C RPL36BO14455 100 aaKnown RBP0.4□□□□□ -2.35
SGD1YLR336C RPL36AP05745 100 aaPredicted RBP0.4□□□□□ -2.35
SGD1YLR336C YOR376W-AQ3E805 51 aa0.4□□□□□ -2.35
SGD1YLR336C TAO3P40468 2376 aa0.4□□□□□ -2.35
SGD1YLR336C YSP2Q06681 1438 aa0.4□□□□□ -2.35
SGD1YLR336C UFD4P33202 1483 aa0.4□□□□□ -2.35
SGD1YLR336C MRPL31P14063 131 aaPredicted RBP0.4□□□□□ -2.35
SGD1YLR336C ERV14P53173 138 aa0.4□□□□□ -2.35
SGD1YLR336C YGR042WP53227 271 aa0.39□□□□□ -2.35
SGD1YLR336C RPO21P04050 1733 aaKnown RBP0.39□□□□□ -2.35
SGD1YLR336C Q0144Q9ZZW2 109 aa0.39□□□□□ -2.35
SGD1YLR336C SEC59P20048 519 aa0.38□□□□□ -2.35
SGD1YLR336C ACP1P32463 125 aa0.38□□□□□ -2.35
SGD1YLR336C YKL044WP36092 106 aa0.38□□□□□ -2.35
SGD1YLR336C CNL1Q06333 122 aa0.38□□□□□ -2.35
SGD1YLR336C MED11Q99278 115 aa0.38□□□□□ -2.35
SGD1YLR336C POR2P40478 281 aa0.38□□□□□ -2.35
SGD1YLR336C BLM10P43583 2143 aa0.38□□□□□ -2.35
SGD1YLR336C YIL014C-AQ02598 104 aa0.38□□□□□ -2.35
SGD1YLR336C HPA2Q06592 156 aa0.38□□□□□ -2.35
SGD1YLR336C EMP24P32803 203 aaKnown RBP0.37□□□□□ -2.35
SGD1YLR336C TY1B-HO13535 1793 aa0.37□□□□□ -2.35
SGD1YLR336C MPC1P53157 130 aaKnown RBP0.37□□□□□ -2.35
SGD1YLR336C YDR034W-BQ6Q5X2 51 aa0.37□□□□□ -2.35
SGD1YLR336C SRX1P36077 127 aa0.36□□□□□ -2.35
SGD1YLR336C YJR128WP47162 119 aa0.36□□□□□ -2.35
SGD1YLR336C ENV10Q99382 181 aa0.36□□□□□ -2.35
SGD1YLR336C LCL1Q02786 101 aa0.36□□□□□ -2.35
SGD1YLR336C GPI19Q04082 140 aa0.36□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms