RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	YBL071C	P38185	102 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	POP7	P38291	140 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	MPM1	P40364	252 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	CIS3	P47001	227 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	LSM8	P47093	109 aa	Known RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	SIP18	P50263	79 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	MIC27	P50945	234 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	TIM13	P53299	105 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	DAD4	P69851	72 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	ATP19	P81451	68 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	HOR7	Q05827	59 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	NAT3	Q06504	195 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	PRM3	Q08931	133 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YOR097C	Q12274	175 aa	Predicted RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	YLR118C	Q12354	227 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YNR034W-A	Q3E841	98 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	UBR2	Q07963	1872 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YPR170W-B	P0C5R9	85 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	YER039C-A	P0CD97	72 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	NHP6A	P11632	93 aa	Known RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	NRG2	P38082	220 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	NSA2	P40078	261 aa	Known RBP	0.98	□□□□□ -2.25
SMC4	YLR086W	YFL019C	P43576	117 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	SPC1	P46965	94 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	UBC7	Q02159	165 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	SNO1	Q03144	224 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	ANT1	Q06497	328 aa		0.98	□□□□□ -2.25
SMC4	YLR086W	FUN14	P18411	198 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	HYP2	P23301	157 aa	Known RBP	0.97	□□□□□ -2.25
SMC4	YLR086W	VMA11	P32842	164 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YKL044W	P36092	106 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	FIG1	P38224	298 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YNL217W	P40152	326 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YHR214C-E	Q8TGK0	99 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YAR023C	D6VPM8	179 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU1	P0CE88	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU14	P0CE89	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU6	P0CE90	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU18	P0CE91	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU8	P0CE92	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU11	P0CE93	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YBL010C	P32788	280 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU13	P38725	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	HTD2	P38790	280 aa	Known RBP	0.97	□□□□□ -2.25
SMC4	YLR086W	YHR173C	P38864	112 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YEA6	P39953	335 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	ERV14	P53173	138 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU4	P53427	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU10	Q03050	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YDR042C	Q03205	200 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	SYM1	Q06563	197 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	RAF1	Q06891	181 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU20	Q08322	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YOR343C	Q12484	108 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PAU9	Q3E770	120 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YFR032C-B	Q8TGU2	87 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YOR304C-A	O14468	76 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	ANB1	P19211	157 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YMR141C	P40211	102 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	POR2	P40478	281 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	KNH1	P50112	268 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YGR017W	P53210	297 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	YPR108W-A	Q3E7B3	70 aa		0.97	□□□□□ -2.25
SMC4	YLR086W	PHS1	P40857	217 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	CIN5	P40917	295 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YIP3	P53633	176 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YDR366C	P87287	132 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	SAE3	P89114	91 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	MAK3	Q03503	176 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	MIX14	Q04341	121 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	FRQ1	Q06389	190 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	DAD1	Q12248	94 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YGL041C-B	Q3E750	60 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YGR240C-A	Q3E786	66 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YGR035W-A	Q45U48	73 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	ROX3	P25046	220 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.96	□□□□□ -2.26	not detected
SMC4	YLR086W	AIM2	P39721	246 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YER076C	P40049	302 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	EMC4	P53073	190 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	PMP3	P87284	55 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	VPS71	Q03433	280 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YDL241W	Q07738	123 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	COX19	Q3E731	98 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YCR085W	P25650	117 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	FZF1	P32805	299 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	PAM17	P36147	197 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	DER1	P38307	211 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	MPC2	P38857	129 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	RGM1	Q00453	211 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	CUE4	Q04201	117 aa	Predicted RBP	0.96	□□□□□ -2.26
SMC4	YLR086W	KEI1	Q06346	221 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YLR042C	Q07990	161 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	ATO3	Q12359	275 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	YPR014C	Q6B0W2	109 aa		0.96	□□□□□ -2.26
SMC4	YLR086W	QCR8	P08525	94 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	SEC11	P15367	167 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	MRPL44	P19956	98 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YHL037C	P38733	133 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YFR035C	P43608	114 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 83.3 ms