RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W ATG8P38182 117 aaRIP-Chip data1.42□□□□□ -2.18not detected
CAP1YKL007W YPT31P38555 223 aaKnown RBP1.42□□□□□ -2.18
CAP1YKL007W RPS27BP38711 82 aa1.42□□□□□ -2.18
CAP1YKL007W GLR1P41921 483 aaKnown RBP1.42□□□□□ -2.18
CAP1YKL007W YGR017WP53210 297 aa1.42□□□□□ -2.18
CAP1YKL007W EST3Q03096 181 aa1.42□□□□□ -2.18
CAP1YKL007W YPR174CQ06616 221 aaPredicted RBP1.42□□□□□ -2.18
CAP1YKL007W HRD1Q08109 551 aa1.42□□□□□ -2.18
CAP1YKL007W YPR145C-AQ2V2P0 78 aa1.42□□□□□ -2.18
CAP1YKL007W ACC1Q00955 2233 aaKnown RBP1.42□□□□□ -2.18
CAP1YKL007W FLO9P39712 1322 aa1.41□□□□□ -2.18
CAP1YKL007W ATP5P09457 212 aa1.41□□□□□ -2.18
CAP1YKL007W RPS28BP0C0X0 67 aaKnown RBP1.41□□□□□ -2.18
CAP1YKL007W RPL2AP0CX45 254 aaKnown RBP1.41□□□□□ -2.18
CAP1YKL007W RPL2BP0CX46 254 aaKnown RBP1.41□□□□□ -2.18
CAP1YKL007W NHP6AP11632 93 aaKnown RBP1.41□□□□□ -2.18
CAP1YKL007W HAP3P13434 144 aa1.41□□□□□ -2.18
CAP1YKL007W SUA7P29055 345 aaPredicted RBP1.41□□□□□ -2.18
CAP1YKL007W HSP150P32478 413 aa1.41□□□□□ -2.18
CAP1YKL007W UPS2P35200 230 aa1.41□□□□□ -2.18
CAP1YKL007W SRX1P36077 127 aa1.41□□□□□ -2.18
CAP1YKL007W FIG1P38224 298 aa1.41□□□□□ -2.18
CAP1YKL007W DER1P38307 211 aa1.41□□□□□ -2.18
CAP1YKL007W RPS20P38701 121 aaKnown RBP1.41□□□□□ -2.18
CAP1YKL007W VMA21P41806 77 aa1.41□□□□□ -2.18
CAP1YKL007W YGL101WP53144 215 aa1.41□□□□□ -2.18
CAP1YKL007W HSK3P69852 69 aa1.41□□□□□ -2.18
CAP1YKL007W YPL067CQ02754 198 aa1.41□□□□□ -2.18
CAP1YKL007W VPS28Q02767 242 aa1.41□□□□□ -2.18
CAP1YKL007W NCE101Q02820 53 aa1.41□□□□□ -2.18
CAP1YKL007W YDR391CQ04170 232 aa1.41□□□□□ -2.18
CAP1YKL007W YMR253CQ04835 414 aa1.41□□□□□ -2.18
CAP1YKL007W SYM1Q06563 197 aa1.41□□□□□ -2.18
CAP1YKL007W YHR007C-AQ07074 71 aa1.41□□□□□ -2.18
CAP1YKL007W IRC23Q08416 157 aa1.41□□□□□ -2.18
CAP1YKL007W YOR385WQ08909 290 aa1.41□□□□□ -2.18
CAP1YKL007W VMA9Q3E7B6 73 aa1.41□□□□□ -2.18
CAP1YKL007W RPS28AQ3E7X9 67 aaPredicted RBP1.41□□□□□ -2.18
CAP1YKL007W YIL134C-AQ45U18 67 aa1.41□□□□□ -2.18
CAP1YKL007W PET20Q99373 253 aa1.41□□□□□ -2.18
CAP1YKL007W TEL1P38110 2787 aa1.41□□□□□ -2.18
CAP1YKL007W COX5BP00425 151 aa1.4□□□□□ -2.19
CAP1YKL007W PBI2P0CT04 75 aaKnown RBP1.4□□□□□ -2.19
CAP1YKL007W SFK1P35735 353 aa1.4□□□□□ -2.19
CAP1YKL007W YIL086CP40503 102 aa1.4□□□□□ -2.19
CAP1YKL007W DAD4P69851 72 aa1.4□□□□□ -2.19
CAP1YKL007W YDR366CP87287 132 aa1.4□□□□□ -2.19
CAP1YKL007W DIG2Q03373 323 aaKnown RBP1.4□□□□□ -2.19
CAP1YKL007W UPS3Q04006 179 aa1.4□□□□□ -2.19
CAP1YKL007W YOR343CQ12484 108 aa1.4□□□□□ -2.19
CAP1YKL007W SLO1Q3E784 85 aa1.4□□□□□ -2.19
CAP1YKL007W YNR034W-AQ3E841 98 aa1.4□□□□□ -2.19
CAP1YKL007W COA6Q3E846 104 aa1.4□□□□□ -2.19
CAP1YKL007W CDC39P25655 2108 aaKnown RBP1.4□□□□□ -2.19
CAP1YKL007W GCN1P33892 2672 aaKnown RBP1.39□□□□□ -2.19
CAP1YKL007W MDM35O60200 86 aa1.39□□□□□ -2.19
CAP1YKL007W YSF3P0C074 85 aaPredicted RBP1.39□□□□□ -2.19
CAP1YKL007W RPS25BP0C0T4 108 aaKnown RBP1.39□□□□□ -2.19
CAP1YKL007W UGX2P32772 223 aa1.39□□□□□ -2.19
CAP1YKL007W PAM17P36147 197 aa1.39□□□□□ -2.19
CAP1YKL007W MRPL11P36521 249 aaPredicted RBP1.39□□□□□ -2.19
CAP1YKL007W LSM2P38203 95 aaKnown RBP1.39□□□□□ -2.19
CAP1YKL007W YNL200CP40165 246 aaKnown RBP1.39□□□□□ -2.19
CAP1YKL007W SWM2P40342 146 aa1.39□□□□□ -2.19
CAP1YKL007W SBH1P52870 82 aa1.39□□□□□ -2.19
CAP1YKL007W DYN2Q02647 92 aa1.39□□□□□ -2.19
CAP1YKL007W PKR1Q03880 122 aaKnown RBP1.39□□□□□ -2.19
CAP1YKL007W THI74Q04083 370 aa1.39□□□□□ -2.19
CAP1YKL007W PRP11Q07350 266 aaPredicted RBP1.39□□□□□ -2.19
CAP1YKL007W YPR013CQ12145 317 aa1.39□□□□□ -2.19
CAP1YKL007W YOR015WQ12169 119 aa1.39□□□□□ -2.19
CAP1YKL007W ATP20Q12233 115 aa1.39□□□□□ -2.19
CAP1YKL007W RPS25AQ3E792 108 aaPredicted RBP1.39□□□□□ -2.19
CAP1YKL007W YLR361C-AQ3E795 98 aa1.39□□□□□ -2.19
CAP1YKL007W BLM10P43583 2143 aa1.39□□□□□ -2.19
CAP1YKL007W RAD6P06104 172 aa1.38□□□□□ -2.19
CAP1YKL007W MRP17P28778 131 aa1.38□□□□□ -2.19
CAP1YKL007W RRT1P38192 103 aa1.38□□□□□ -2.19
CAP1YKL007W GCV3P39726 170 aaPredicted RBP1.38□□□□□ -2.19
CAP1YKL007W SNU13P39990 126 aaKnown RBP1.38□□□□□ -2.19
CAP1YKL007W FLX1P40464 311 aa1.38□□□□□ -2.19
CAP1YKL007W YDR102CQ03864 110 aa1.38□□□□□ -2.19
CAP1YKL007W CNL1Q06333 122 aa1.38□□□□□ -2.19
CAP1YKL007W RRT7Q07829 113 aa1.38□□□□□ -2.19
CAP1YKL007W YOL118CQ08259 102 aa1.38□□□□□ -2.19
CAP1YKL007W NAT5Q08689 176 aa1.38□□□□□ -2.19
CAP1YKL007W FCF2Q12035 217 aaPredicted RBP1.38□□□□□ -2.19
CAP1YKL007W YCR075W-AQ3E830 75 aa1.38□□□□□ -2.19
CAP1YKL007W YCR023CP25351 611 aa1.37□□□□□ -2.19
CAP1YKL007W YRA2P36036 203 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
CAP1YKL007W FYV4P38783 130 aaPredicted RBP1.37□□□□□ -2.19
CAP1YKL007W YPL073CP40323 161 aa1.37□□□□□ -2.19
CAP1YKL007W DLS1P40366 167 aa1.37□□□□□ -2.19
CAP1YKL007W EMC5P40540 141 aa1.37□□□□□ -2.19
CAP1YKL007W PAU15P40585 124 aa1.37□□□□□ -2.19
CAP1YKL007W SBH2P52871 88 aa1.37□□□□□ -2.19
CAP1YKL007W THG1P53215 237 aaKnown RBP1.37□□□□□ -2.19
CAP1YKL007W HHT1P61830 136 aa1.37□□□□□ -2.19
CAP1YKL007W FIT1Q04433 528 aa1.37□□□□□ -2.19
CAP1YKL007W AVO2Q04749 426 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 107.3 ms