RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C SRX1P36077 127 aa0.9□□□□□ -2.27
HIR3YJR140C YGR164WP53291 111 aa0.9□□□□□ -2.27
HIR3YJR140C YPL261CQ08976 102 aa0.9□□□□□ -2.27
HIR3YJR140C XRN1P22147 1528 aaKnown RBP0.9□□□□□ -2.27
HIR3YJR140C DNF1P32660 1571 aa0.9□□□□□ -2.27
HIR3YJR140C AQY2P0CD90 149 aa0.9□□□□□ -2.27
HIR3YJR140C RPL40AP0CH08 128 aaKnown RBP0.9□□□□□ -2.27
HIR3YJR140C RPL40BP0CH09 128 aaKnown RBP0.9□□□□□ -2.27
HIR3YJR140C RPL22BP56628 122 aaKnown RBP0.9□□□□□ -2.27
HIR3YJR140C YLR042CQ07990 161 aa0.9□□□□□ -2.27
HIR3YJR140C MRPL31P14063 131 aaPredicted RBP0.89□□□□□ -2.27
HIR3YJR140C GNA1P43577 159 aaPredicted RBP0.89□□□□□ -2.27
HIR3YJR140C RPL22AP05749 121 aaKnown RBP0.89□□□□□ -2.27
HIR3YJR140C MVB12P42939 101 aa0.89□□□□□ -2.27
HIR3YJR140C RPS12P48589 143 aaKnown RBP0.89□□□□□ -2.27
HIR3YJR140C UBR2Q07963 1872 aa0.89□□□□□ -2.27
HIR3YJR140C YAR029WP39549 74 aa0.89□□□□□ -2.27
HIR3YJR140C PRM3Q08931 133 aa0.89□□□□□ -2.27
HIR3YJR140C ENV10Q99382 181 aa0.89□□□□□ -2.27
HIR3YJR140C RTC6O14464 93 aa0.88□□□□□ -2.27
HIR3YJR140C LTE1P07866 1435 aa0.88□□□□□ -2.27
HIR3YJR140C YJL197C-AP0C5P0 93 aa0.88□□□□□ -2.27
HIR3YJR140C SNN1P48232 102 aa0.88□□□□□ -2.27
HIR3YJR140C YMR321CQ04898 105 aa0.88□□□□□ -2.27
HIR3YJR140C YER137CP40083 148 aaKnown RBP0.88□□□□□ -2.27
HIR3YJR140C HUR1P45820 110 aa0.88□□□□□ -2.27
HIR3YJR140C FIT3Q08907 204 aa0.88□□□□□ -2.27
HIR3YJR140C LHP1P33399 275 aaKnown RBP0.88□□□□□ -2.27
HIR3YJR140C OCA6Q12454 224 aa0.88□□□□□ -2.27
HIR3YJR140C ROM2P51862 1356 aaKnown RBP0.87□□□□□ -2.27
HIR3YJR140C DUR1,2P32528 1835 aaKnown RBP0.87□□□□□ -2.27
HIR3YJR140C ADK1P07170 222 aaKnown RBP0.87□□□□□ -2.27
HIR3YJR140C YFR035CP43608 114 aa0.87□□□□□ -2.27
HIR3YJR140C YOL013W-AP0C272 63 aaPredicted RBP0.87□□□□□ -2.27
HIR3YJR140C YER187WP40102 141 aa0.87□□□□□ -2.27
HIR3YJR140C YMR090WQ04304 227 aaKnown RBP0.87□□□□□ -2.27
HIR3YJR140C EMP24P32803 203 aaKnown RBP0.87□□□□□ -2.27
HIR3YJR140C MIC27P50945 234 aa0.87□□□□□ -2.27
HIR3YJR140C YCL048W-AQ2V2Q2 79 aa0.87□□□□□ -2.27
HIR3YJR140C YLR365WQ7LIF2 110 aa0.87□□□□□ -2.27
HIR3YJR140C YSF3P0C074 85 aaPredicted RBP0.86□□□□□ -2.27
HIR3YJR140C CYB5P40312 120 aa0.86□□□□□ -2.27
HIR3YJR140C HUA1P40325 198 aa0.86□□□□□ -2.27
HIR3YJR140C YLR194CQ05777 254 aa0.86□□□□□ -2.27
HIR3YJR140C ZEO1Q08245 113 aa0.86□□□□□ -2.27
HIR3YJR140C YPL225WQ08971 146 aaKnown RBP0.86□□□□□ -2.27
HIR3YJR140C YBR013CP38215 129 aa0.86□□□□□ -2.27
HIR3YJR140C YHR138CP38841 114 aaPredicted RBP0.86□□□□□ -2.27
HIR3YJR140C POR2P40478 281 aa0.86□□□□□ -2.27
HIR3YJR140C PCC1Q3E833 88 aa0.86□□□□□ -2.27
HIR3YJR140C SSN2P38931 1420 aa0.86□□□□□ -2.27
HIR3YJR140C TSC11P40061 1430 aa0.85□□□□□ -2.27
HIR3YJR140C YMR141CP40211 102 aa0.85□□□□□ -2.27
HIR3YJR140C YIL163CP40448 117 aa0.85□□□□□ -2.27
HIR3YJR140C YOS1Q3E834 85 aa0.85□□□□□ -2.27
HIR3YJR140C YRF1-1P0CX20 1796 aa0.85□□□□□ -2.27
HIR3YJR140C YRF1-5P0CX21 1796 aa0.85□□□□□ -2.27
HIR3YJR140C YRF1-8P0CX22 1796 aa0.85□□□□□ -2.27
HIR3YJR140C YGR240C-AQ3E786 66 aa0.85□□□□□ -2.27
HIR3YJR140C YSP2Q06681 1438 aa0.85□□□□□ -2.27
HIR3YJR140C RIF1P29539 1916 aa0.85□□□□□ -2.27
HIR3YJR140C TRS20P38334 175 aa0.85□□□□□ -2.27
HIR3YJR140C YHR130CP38834 111 aa0.85□□□□□ -2.27
HIR3YJR140C VPS55P47111 140 aa0.85□□□□□ -2.27
HIR3YJR140C GEA2P39993 1459 aaKnown RBP0.85□□□□□ -2.27
HIR3YJR140C HHY1P39982 102 aa0.84□□□□□ -2.27
HIR3YJR140C GEA1P47102 1408 aaPredicted RBP0.84□□□□□ -2.27
HIR3YJR140C YBR090CP38253 122 aa0.84□□□□□ -2.28
HIR3YJR140C HUG1Q6Q5K6 68 aa0.84□□□□□ -2.28
HIR3YJR140C IRC20Q06554 1556 aa0.84□□□□□ -2.28
HIR3YJR140C YOR376W-AQ3E805 51 aa0.84□□□□□ -2.28
HIR3YJR140C YBR056W-AI2HB52 66 aa0.83□□□□□ -2.28
HIR3YJR140C YEA6P39953 335 aa0.83□□□□□ -2.28
HIR3YJR140C FAS1P07149 2051 aaKnown RBP0.83□□□□□ -2.28
HIR3YJR140C ARO1P08566 1588 aaKnown RBP0.83□□□□□ -2.28
HIR3YJR140C YER039C-AP0CD97 72 aa0.83□□□□□ -2.28
HIR3YJR140C PAU19P0CE85 124 aa0.83□□□□□ -2.28
HIR3YJR140C PAU3P25610 124 aa0.83□□□□□ -2.28
HIR3YJR140C AIM4P38305 123 aaPredicted RBP0.83□□□□□ -2.28
HIR3YJR140C EMC5P40540 141 aa0.83□□□□□ -2.28
HIR3YJR140C RPL37AP49166 88 aaKnown RBP0.83□□□□□ -2.28
HIR3YJR140C ESC1Q03661 1658 aaKnown RBP0.83□□□□□ -2.28
HIR3YJR140C CAT8P39113 1433 aa0.83□□□□□ -2.28
HIR3YJR140C YOL118CQ08259 102 aa0.83□□□□□ -2.28
HIR3YJR140C YMR103CQ04436 120 aa0.82□□□□□ -2.28
HIR3YJR140C LSM6Q06406 86 aaKnown RBP0.82□□□□□ -2.28
HIR3YJR140C HMRA2P0CY13 119 aa0.82□□□□□ -2.28
HIR3YJR140C UBR1P19812 1950 aa0.82□□□□□ -2.28
HIR3YJR140C COX23P38824 151 aa0.82□□□□□ -2.28
HIR3YJR140C RPL37BP51402 88 aaKnown RBP0.82□□□□□ -2.28
HIR3YJR140C COX12Q01519 83 aa0.82□□□□□ -2.28
HIR3YJR140C CYR1P08678 2026 aaKnown RBP0.81□□□□□ -2.28
HIR3YJR140C PAU12P53343 120 aa0.81□□□□□ -2.28
HIR3YJR140C SNA2P56508 79 aa0.81□□□□□ -2.28
HIR3YJR140C YLR285C-AQ3E771 56 aa0.81□□□□□ -2.28
HIR3YJR140C ATG2P53855 1592 aa0.81□□□□□ -2.28
HIR3YJR140C YJR128WP47162 119 aa0.81□□□□□ -2.28
HIR3YJR140C MON2P48563 1636 aaPredicted RBP0.81□□□□□ -2.28
HIR3YJR140C YER188C-AP0C0V2 99 aa0.81□□□□□ -2.28
HIR3YJR140C MRP17P28778 131 aa0.81□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms