RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YOR020W-AQ3E824 90 aa2.6□□□□□ -1.99
YIR040CYIR040C PDR15Q04182 1529 aaKnown RBP2.59□□□□□ -1.99
YIR040CYIR040C RPB9P27999 122 aa2.59□□□□□ -1.99
YIR040CYIR040C YKL097CP34245 136 aa2.59□□□□□ -1.99
YIR040CYIR040C YKR045CP36138 183 aa2.59□□□□□ -1.99
YIR040CYIR040C EDC2P40023 145 aaPredicted RBP2.59□□□□□ -1.99
YIR040CYIR040C RSM18P40033 138 aa2.59□□□□□ -1.99
YIR040CYIR040C YDR102CQ03864 110 aa2.59□□□□□ -1.99
YIR040CYIR040C LPP1Q04396 274 aa2.59□□□□□ -1.99
YIR040CYIR040C YOL014WQ08110 124 aa2.59□□□□□ -1.99
YIR040CYIR040C YOL159CQ08300 171 aa2.59□□□□□ -1.99
YIR040CYIR040C ATO3Q12359 275 aa2.59□□□□□ -1.99
YIR040CYIR040C PCL9Q12477 304 aa2.59□□□□□ -1.99
YIR040CYIR040C YDR381C-AQ3E6R5 114 aa2.59□□□□□ -1.99
YIR040CYIR040C YFR032C-BQ8TGU2 87 aa2.59□□□□□ -1.99
YIR040CYIR040C YPL229WQ99395 206 aa2.59□□□□□ -1.99
YIR040CYIR040C YLR422WQ06409 1932 aa2.59□□□□□ -1.99
YIR040CYIR040C RPA190P10964 1664 aaKnown RBP2.58□□□□□ -2
YIR040CYIR040C PIS1P06197 220 aaKnown RBP2.58□□□□□ -2
YIR040CYIR040C DDR48P18899 430 aaKnown RBP2.58□□□□□ -2
YIR040CYIR040C YCR041WP37265 110 aa2.58□□□□□ -2
YIR040CYIR040C RPL21AQ02753 160 aaKnown RBP2.58□□□□□ -2
YIR040CYIR040C YMR181CQ03231 154 aa2.58□□□□□ -2
YIR040CYIR040C SMT3Q12306 101 aaKnown RBP2.58□□□□□ -2
YIR040CYIR040C RPL21BQ12672 160 aaKnown RBP2.58□□□□□ -2
YIR040CYIR040C YOR093CQ12275 1648 aa2.57□□□□□ -2
YIR040CYIR040C YHR213WP0CI67 198 aa2.57□□□□□ -2
YIR040CYIR040C FZF1P32805 299 aa2.57□□□□□ -2
YIR040CYIR040C YKL044WP36092 106 aa2.57□□□□□ -2
YIR040CYIR040C YNL200CP40165 246 aaKnown RBP2.57□□□□□ -2
YIR040CYIR040C SIM1P40472 476 aa2.57□□□□□ -2
YIR040CYIR040C MET31Q03081 177 aa2.57□□□□□ -2
YIR040CYIR040C YMR295CQ03559 197 aa2.57□□□□□ -2
YIR040CYIR040C MRPS8Q03799 155 aa2.57□□□□□ -2
YIR040CYIR040C EMI1Q04406 187 aa2.57□□□□□ -2
YIR040CYIR040C LSM6Q06406 86 aaKnown RBP2.57□□□□□ -2
YIR040CYIR040C MHF2Q3E829 80 aa2.57□□□□□ -2
YIR040CYIR040C SEC7P11075 2009 aaKnown RBP2.57□□□□□ -2
YIR040CYIR040C YHR139C-AO13536 103 aa2.56□□□□□ -2
YIR040CYIR040C RPL23AP0CX41 137 aaKnown RBP2.56□□□□□ -2
YIR040CYIR040C RPL23BP0CX42 137 aaKnown RBP2.56□□□□□ -2
YIR040CYIR040C IMP1P28627 190 aa2.56□□□□□ -2
YIR040CYIR040C PET8P38921 284 aa2.56□□□□□ -2
YIR040CYIR040C YAL064WP39711 94 aa2.56□□□□□ -2
YIR040CYIR040C YEL028WP39989 153 aa2.56□□□□□ -2
YIR040CYIR040C YNL217WP40152 326 aa2.56□□□□□ -2
YIR040CYIR040C YFL019CP43576 117 aa2.56□□□□□ -2
YIR040CYIR040C YJL028WP47062 111 aa2.56□□□□□ -2
YIR040CYIR040C BOL2P53082 120 aa2.56□□□□□ -2
YIR040CYIR040C PIR1Q03178 341 aa2.56□□□□□ -2
YIR040CYIR040C ICY1Q04329 127 aa2.56□□□□□ -2
YIR040CYIR040C RPS22BQ3E7Y3 130 aaKnown RBP2.56□□□□□ -2
YIR040CYIR040C YOR376W-AQ3E805 51 aa2.56□□□□□ -2
YIR040CYIR040C NAG1Q8TGN9 163 aa2.56□□□□□ -2
YIR040CYIR040C MRPL31P14063 131 aaPredicted RBP2.55□□□□□ -2
YIR040CYIR040C MTC6P38849 526 aa2.55□□□□□ -2
YIR040CYIR040C YHR180WP38868 163 aa2.55□□□□□ -2
YIR040CYIR040C YER187WP40102 141 aa2.55□□□□□ -2
YIR040CYIR040C YGL118CP53132 145 aa2.55□□□□□ -2
YIR040CYIR040C MZM1Q03429 123 aaPredicted RBP2.55□□□□□ -2
YIR040CYIR040C LIP1Q03579 150 aa2.55□□□□□ -2
YIR040CYIR040C YOL118CQ08259 102 aa2.55□□□□□ -2
YIR040CYIR040C YOR343CQ12484 108 aa2.55□□□□□ -2
YIR040CYIR040C DOP1Q03921 1698 aa2.54□□□□□ -2
YIR040CYIR040C RPS14AP06367 137 aaKnown RBP2.54□□□□□ -2
YIR040CYIR040C MAK31P23059 88 aa2.54□□□□□ -2
YIR040CYIR040C ERG2P32352 222 aa2.54□□□□□ -2
YIR040CYIR040C YEL045CP32616 141 aa2.54□□□□□ -2
YIR040CYIR040C GPX1P36014 167 aa2.54□□□□□ -2
YIR040CYIR040C COX14P39103 70 aa2.54□□□□□ -2
YIR040CYIR040C RPS14BP39516 138 aaKnown RBP2.54□□□□□ -2
YIR040CYIR040C NCA3P46955 337 aa2.54□□□□□ -2
YIR040CYIR040C ICS3P47034 131 aa2.54□□□□□ -2
YIR040CYIR040C IGO1P53897 168 aa2.54□□□□□ -2
YIR040CYIR040C PBA1Q05778 276 aa2.54□□□□□ -2
YIR040CYIR040C YPL278CQ08990 100 aa2.54□□□□□ -2
YIR040CYIR040C YPR011CQ12251 326 aa2.54□□□□□ -2
YIR040CYIR040C YKL065W-AQ2V2P2 73 aa2.54□□□□□ -2
YIR040CYIR040C TY4B-HP0C2J7 1802 aa2.54□□□□□ -2
YIR040CYIR040C DUR1,2P32528 1835 aaKnown RBP2.54□□□□□ -2
YIR040CYIR040C VMR1P38735 1592 aa2.53□□□□□ -2
YIR040CYIR040C FLO11P08640 1367 aa2.53□□□□□ -2
YIR040CYIR040C YAR023CD6VPM8 179 aa2.53□□□□□ -2
YIR040CYIR040C PAU1P0CE88 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU14P0CE89 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU6P0CE90 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU18P0CE91 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU8P0CE92 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU11P0CE93 120 aa2.53□□□□□ -2
YIR040CYIR040C ROX3P25046 220 aa2.53□□□□□ -2
YIR040CYIR040C FYV5P25585 152 aa2.53□□□□□ -2
YIR040CYIR040C AGA1P32323 725 aa2.53□□□□□ -2
YIR040CYIR040C QCR10P37299 77 aa2.53□□□□□ -2
YIR040CYIR040C YSY6P38374 65 aa2.53□□□□□ -2
YIR040CYIR040C PAU13P38725 120 aa2.53□□□□□ -2
YIR040CYIR040C VTC1P40046 129 aaRIP-Chip data2.53□□□□□ -2not detected
YIR040CYIR040C PAU4P53427 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU10Q03050 120 aa2.53□□□□□ -2
YIR040CYIR040C PAU20Q08322 120 aa2.53□□□□□ -2
YIR040CYIR040C YPL261CQ08976 102 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 43.2 ms