RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W GLC8P41818 229 aa1.13□□□□□ -2.23
MSL1YIR009W TIM8P57744 87 aa1.13□□□□□ -2.23
MSL1YIR009W ATP19P81451 68 aa1.13□□□□□ -2.23
MSL1YIR009W DYN2Q02647 92 aa1.13□□□□□ -2.23
MSL1YIR009W UTP10P42945 1769 aaKnown RBP1.13□□□□□ -2.23
MSL1YIR009W MAK31P23059 88 aa1.12□□□□□ -2.23
MSL1YIR009W HSP150P32478 413 aa1.12□□□□□ -2.23
MSL1YIR009W YBL010CP32788 280 aa1.12□□□□□ -2.23
MSL1YIR009W SHB17P36136 271 aaKnown RBP1.12□□□□□ -2.23
MSL1YIR009W TRS20P38334 175 aa1.12□□□□□ -2.23
MSL1YIR009W HPA3P39979 161 aa1.12□□□□□ -2.23
MSL1YIR009W YEL014CP39999 101 aa1.12□□□□□ -2.23
MSL1YIR009W HPM1P40481 377 aa1.12□□□□□ -2.23
MSL1YIR009W BAT2P47176 376 aaKnown RBP1.12□□□□□ -2.23
MSL1YIR009W YNL019CP53975 284 aa1.12□□□□□ -2.23
MSL1YIR009W SLO1Q3E784 85 aa1.12□□□□□ -2.23
MSL1YIR009W DDP1Q99321 188 aaKnown RBP1.12□□□□□ -2.23
MSL1YIR009W RPS25BP0C0T4 108 aaKnown RBP1.11□□□□□ -2.23
MSL1YIR009W FPR1P20081 114 aaKnown RBP1.11□□□□□ -2.23
MSL1YIR009W YGL010WP25338 174 aa1.11□□□□□ -2.23
MSL1YIR009W ETR1P38071 380 aa1.11□□□□□ -2.23
MSL1YIR009W FLX1P40464 311 aa1.11□□□□□ -2.23
MSL1YIR009W SPG1P50088 95 aa1.11□□□□□ -2.23
MSL1YIR009W MZM1Q03429 123 aaPredicted RBP1.11□□□□□ -2.23
MSL1YIR009W YMR252CQ04814 134 aa1.11□□□□□ -2.23
MSL1YIR009W NMA1Q06178 401 aaKnown RBP1.11□□□□□ -2.23
MSL1YIR009W YPR153WQ06537 140 aa1.11□□□□□ -2.23
MSL1YIR009W IRC19Q07843 230 aa1.11□□□□□ -2.23
MSL1YIR009W RPS25AQ3E792 108 aaPredicted RBP1.11□□□□□ -2.23
MSL1YIR009W CMC4Q3E7A9 73 aa1.11□□□□□ -2.23
MSL1YIR009W RAD50P12753 1312 aa1.11□□□□□ -2.23
MSL1YIR009W URA2P07259 2214 aaKnown RBP1.11□□□□□ -2.23
MSL1YIR009W FMP49A0A023PZB3 126 aa1.1□□□□□ -2.23
MSL1YIR009W RPC19P28000 142 aaKnown RBP1.1□□□□□ -2.23
MSL1YIR009W SFT1P43682 97 aa1.1□□□□□ -2.23
MSL1YIR009W CWC27Q02770 301 aa1.1□□□□□ -2.23
MSL1YIR009W TMA23Q03525 211 aa1.1□□□□□ -2.23
MSL1YIR009W YIL046W-AQ3E7Z4 54 aa1.1□□□□□ -2.23
MSL1YIR009W SCS22Q6Q595 175 aa1.1□□□□□ -2.23
MSL1YIR009W TAR1Q8TGM6 124 aa1.1□□□□□ -2.23
MSL1YIR009W RPL14AP36105 138 aaKnown RBP1.09□□□□□ -2.23
MSL1YIR009W YKR070WP36151 352 aaKnown RBP1.09□□□□□ -2.23
MSL1YIR009W RPL14BP38754 138 aaKnown RBP1.09□□□□□ -2.23
MSL1YIR009W IPT1P38954 527 aa1.09□□□□□ -2.23
MSL1YIR009W GAT4P40569 121 aa1.09□□□□□ -2.23
MSL1YIR009W APS3P47064 194 aa1.09□□□□□ -2.23
MSL1YIR009W YAE1P47118 141 aaPredicted RBP1.09□□□□□ -2.23
MSL1YIR009W DIE2P50076 525 aa1.09□□□□□ -2.23
MSL1YIR009W SOM1Q05676 74 aa1.09□□□□□ -2.23
MSL1YIR009W RAF1Q06891 181 aa1.09□□□□□ -2.23
MSL1YIR009W YOR385WQ08909 290 aa1.09□□□□□ -2.23
MSL1YIR009W ECM29P38737 1868 aa1.09□□□□□ -2.24
MSL1YIR009W SLH1P53327 1967 aaKnown RBP1.08□□□□□ -2.24
MSL1YIR009W COX5BP00425 151 aa1.08□□□□□ -2.24
MSL1YIR009W RPS1BP23248 255 aaKnown RBP1.08□□□□□ -2.24
MSL1YIR009W PHS1P40857 217 aa1.08□□□□□ -2.24
MSL1YIR009W SDH7Q04401 133 aa1.08□□□□□ -2.24
MSL1YIR009W CNL1Q06333 122 aa1.08□□□□□ -2.24
MSL1YIR009W ATP14Q12349 124 aa1.08□□□□□ -2.24
MSL1YIR009W HUT1Q12520 339 aa1.08□□□□□ -2.24
MSL1YIR009W COA3Q3E7B2 85 aa1.08□□□□□ -2.24
MSL1YIR009W Q0144Q9ZZW2 109 aa1.08□□□□□ -2.24
MSL1YIR009W YHR212W-AP0CX91 67 aa1.07□□□□□ -2.24
MSL1YIR009W FYV5P25585 152 aa1.07□□□□□ -2.24
MSL1YIR009W YCR050CP25630 102 aa1.07□□□□□ -2.24
MSL1YIR009W ECM31P38122 312 aa1.07□□□□□ -2.24
MSL1YIR009W SFT2P38166 215 aa1.07□□□□□ -2.24
MSL1YIR009W LSM8P47093 109 aaKnown RBP1.07□□□□□ -2.24
MSL1YIR009W YGR017WP53210 297 aa1.07□□□□□ -2.24
MSL1YIR009W ELC1Q03071 99 aa1.07□□□□□ -2.24
MSL1YIR009W PRE1P22141 198 aaKnown RBP1.06□□□□□ -2.24
MSL1YIR009W HYM1P32464 399 aa1.06□□□□□ -2.24
MSL1YIR009W YHL042WP38729 150 aa1.06□□□□□ -2.24
MSL1YIR009W FIT1Q04433 528 aa1.06□□□□□ -2.24
MSL1YIR009W VAM10Q08474 114 aa1.06□□□□□ -2.24
MSL1YIR009W LAA1P39526 2014 aa1.05□□□□□ -2.24
MSL1YIR009W RPS1AP33442 255 aaKnown RBP1.05□□□□□ -2.24
MSL1YIR009W QCR10P37299 77 aa1.05□□□□□ -2.24
MSL1YIR009W YAL064WP39711 94 aa1.05□□□□□ -2.24
MSL1YIR009W YFL051CP43552 160 aa1.05□□□□□ -2.24
MSL1YIR009W BRP1P53194 125 aa1.05□□□□□ -2.24
MSL1YIR009W SPC24Q04477 213 aa1.05□□□□□ -2.24
MSL1YIR009W TVP18Q04767 167 aa1.05□□□□□ -2.24
MSL1YIR009W NKP2Q06162 153 aa1.05□□□□□ -2.24
MSL1YIR009W FRQ1Q06389 190 aa1.05□□□□□ -2.24
MSL1YIR009W GPI11Q06636 219 aa1.05□□□□□ -2.24
MSL1YIR009W YLR118CQ12354 227 aa1.05□□□□□ -2.24
MSL1YIR009W HYP2P23301 157 aaKnown RBP1.04□□□□□ -2.24
MSL1YIR009W MRP49P32388 137 aa1.04□□□□□ -2.24
MSL1YIR009W SRX1P36077 127 aa1.04□□□□□ -2.24
MSL1YIR009W YBR027CP38220 110 aa1.04□□□□□ -2.24
MSL1YIR009W VMA7P39111 118 aa1.04□□□□□ -2.24
MSL1YIR009W YFL065CP43539 102 aa1.04□□□□□ -2.24
MSL1YIR009W YCL001W-AP87012 153 aa1.04□□□□□ -2.24
MSL1YIR009W AIM11P87275 137 aa1.04□□□□□ -2.24
MSL1YIR009W YIR021W-AQ3E739 70 aa1.04□□□□□ -2.24
MSL1YIR009W KIN28P06242 306 aa1.03□□□□□ -2.24
MSL1YIR009W AQY2P0CD90 149 aa1.03□□□□□ -2.24
MSL1YIR009W MRPL44P19956 98 aa1.03□□□□□ -2.24
MSL1YIR009W DCV1P43595 202 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms