RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C YER085CP40058 173 aa2.32□□□□□ -2.04
SDS3YIL084C PDR17P53844 350 aa2.32□□□□□ -2.04
SDS3YIL084C SNO1Q03144 224 aa2.32□□□□□ -2.04
SDS3YIL084C TMA23Q03525 211 aa2.32□□□□□ -2.04
SDS3YIL084C YMR090WQ04304 227 aaKnown RBP2.32□□□□□ -2.04
SDS3YIL084C YOR385WQ08909 290 aa2.32□□□□□ -2.04
SDS3YIL084C YOR020W-AQ3E824 90 aa2.32□□□□□ -2.04
SDS3YIL084C YPL229WQ99395 206 aa2.32□□□□□ -2.04
SDS3YIL084C GCN3P14741 305 aa2.31□□□□□ -2.04
SDS3YIL084C RPB3P16370 318 aaKnown RBP2.31□□□□□ -2.04
SDS3YIL084C MIC27P50945 234 aa2.31□□□□□ -2.04
SDS3YIL084C RRT7Q07829 113 aa2.31□□□□□ -2.04
SDS3YIL084C YDR010CQ12426 110 aa2.31□□□□□ -2.04
SDS3YIL084C YPR145C-AQ2V2P0 78 aa2.31□□□□□ -2.04
SDS3YIL084C YGR240C-AQ3E786 66 aa2.31□□□□□ -2.04
SDS3YIL084C FPR2P32472 135 aa2.3□□□□□ -2.04
SDS3YIL084C YNL217WP40152 326 aa2.3□□□□□ -2.04
SDS3YIL084C YGR269WP40326 108 aa2.3□□□□□ -2.04
SDS3YIL084C SMD3P43321 101 aaKnown RBP2.3□□□□□ -2.04
SDS3YIL084C LSM1P47017 172 aaKnown RBP2.3□□□□□ -2.04
SDS3YIL084C MMS2P53152 137 aa2.3□□□□□ -2.04
SDS3YIL084C DAD3P69850 94 aa2.3□□□□□ -2.04
SDS3YIL084C YMR007WQ03675 126 aa2.3□□□□□ -2.04
SDS3YIL084C YML108WQ03759 105 aa2.3□□□□□ -2.04
SDS3YIL084C YLR307C-AQ3E825 87 aa2.3□□□□□ -2.04
SDS3YIL084C YAR023CD6VPM8 179 aa2.29□□□□□ -2.04
SDS3YIL084C DDI2P0CH63 225 aa2.29□□□□□ -2.04
SDS3YIL084C DDI3P0CH64 225 aa2.29□□□□□ -2.04
SDS3YIL084C DER1P38307 211 aa2.29□□□□□ -2.04
SDS3YIL084C RPF1P38805 295 aaKnown RBP2.29□□□□□ -2.04
SDS3YIL084C SER2P42941 309 aa2.29□□□□□ -2.04
SDS3YIL084C CWC23P52868 283 aaPredicted RBP2.29□□□□□ -2.04
SDS3YIL084C MGA1P53050 456 aa2.29□□□□□ -2.04
SDS3YIL084C ABF2Q02486 183 aa2.29□□□□□ -2.04
SDS3YIL084C YMR253CQ04835 414 aa2.29□□□□□ -2.04
SDS3YIL084C HTB2P02294 131 aa2.28□□□□□ -2.04
SDS3YIL084C VAR1P02381 398 aa2.28□□□□□ -2.04
SDS3YIL084C MRPL28P36527 147 aa2.28□□□□□ -2.04
SDS3YIL084C YMR141CP40211 102 aa2.28□□□□□ -2.04
SDS3YIL084C SWM2P40342 146 aa2.28□□□□□ -2.04
SDS3YIL084C EMC5P40540 141 aa2.28□□□□□ -2.04
SDS3YIL084C YGR017WP53210 297 aa2.28□□□□□ -2.04
SDS3YIL084C ORM1P53224 222 aa2.28□□□□□ -2.04
SDS3YIL084C YHR086W-AQ3E746 53 aa2.28□□□□□ -2.04
SDS3YIL084C RPL33AP05744 107 aaKnown RBP2.27□□□□□ -2.05
SDS3YIL084C NTF2P33331 125 aaKnown RBP2.27□□□□□ -2.05
SDS3YIL084C RPL33BP41056 107 aaKnown RBP2.27□□□□□ -2.05
SDS3YIL084C CGR1P53188 120 aa2.27□□□□□ -2.05
SDS3YIL084C LSM7P53905 115 aaKnown RBP2.27□□□□□ -2.05
SDS3YIL084C TMA20P89886 181 aaPredicted RBP2.27□□□□□ -2.05
SDS3YIL084C LCL1Q02786 101 aa2.27□□□□□ -2.05
SDS3YIL084C FIT2Q08906 153 aa2.27□□□□□ -2.05
SDS3YIL084C IPI1P38803 334 aaPredicted RBP2.26□□□□□ -2.05
SDS3YIL084C YEA6P39953 335 aa2.26□□□□□ -2.05
SDS3YIL084C POG1P40473 351 aa2.26□□□□□ -2.05
SDS3YIL084C YLR146W-AQ2V2P1 62 aa2.26□□□□□ -2.05
SDS3YIL084C HSP12P22943 109 aaKnown RBP2.25□□□□□ -2.05
SDS3YIL084C SPO13P23624 291 aa2.25□□□□□ -2.05
SDS3YIL084C SLM6P38343 150 aa2.25□□□□□ -2.05
SDS3YIL084C PEX17P40155 199 aa2.25□□□□□ -2.05
SDS3YIL084C RAV2Q03956 351 aa2.25□□□□□ -2.05
SDS3YIL084C YMR082CQ04276 118 aa2.25□□□□□ -2.05
SDS3YIL084C YMR320WQ04897 101 aa2.25□□□□□ -2.05
SDS3YIL084C DGA1Q08650 418 aa2.25□□□□□ -2.05
SDS3YIL084C LSO2Q3E772 92 aaKnown RBP2.25□□□□□ -2.05
SDS3YIL084C YHR213W-AQ8TGT4 77 aa2.25□□□□□ -2.05
SDS3YIL084C SPI1P40092 148 aa2.24□□□□□ -2.05
SDS3YIL084C YLR042CQ07990 161 aa2.24□□□□□ -2.05
SDS3YIL084C YDR029WQ12111 104 aa2.24□□□□□ -2.05
SDS3YIL084C YBR200W-AQ3E755 54 aa2.24□□□□□ -2.05
SDS3YIL084C ARG80P07249 177 aa2.23□□□□□ -2.05
SDS3YIL084C SPS2P08459 502 aa2.23□□□□□ -2.05
SDS3YIL084C TRS20P38334 175 aa2.23□□□□□ -2.05
SDS3YIL084C SNA2P56508 79 aa2.23□□□□□ -2.05
SDS3YIL084C DID2P69771 204 aa2.23□□□□□ -2.05
SDS3YIL084C YDR366CP87287 132 aa2.23□□□□□ -2.05
SDS3YIL084C AIM34Q03673 198 aa2.23□□□□□ -2.05
SDS3YIL084C AVO2Q04749 426 aa2.23□□□□□ -2.05
SDS3YIL084C HYP2P23301 157 aaKnown RBP2.22□□□□□ -2.05
SDS3YIL084C YCR023CP25351 611 aa2.22□□□□□ -2.05
SDS3YIL084C RPL14AP36105 138 aaKnown RBP2.22□□□□□ -2.05
SDS3YIL084C RPL14BP38754 138 aaKnown RBP2.22□□□□□ -2.05
SDS3YIL084C YJR111CP47148 283 aaKnown RBP2.22□□□□□ -2.05
SDS3YIL084C BRP1P53194 125 aa2.22□□□□□ -2.05
SDS3YIL084C DAD4P69851 72 aa2.22□□□□□ -2.05
SDS3YIL084C MRS1P07266 363 aa2.21□□□□□ -2.06
SDS3YIL084C YPR170W-BP0C5R9 85 aa2.21□□□□□ -2.06
SDS3YIL084C TIR1P10863 254 aa2.21□□□□□ -2.06
SDS3YIL084C NHP6BP11633 99 aaKnown RBP2.21□□□□□ -2.06
SDS3YIL084C SPT14P32363 452 aa2.21□□□□□ -2.06
SDS3YIL084C YAL064WP39711 94 aa2.21□□□□□ -2.06
SDS3YIL084C RPL13BP40212 199 aaKnown RBP2.21□□□□□ -2.06
SDS3YIL084C PGD1P40356 397 aa2.21□□□□□ -2.06
SDS3YIL084C RPL13AQ12690 199 aaPredicted RBP2.21□□□□□ -2.06
SDS3YIL084C YHR139C-AO13536 103 aa2.2□□□□□ -2.06
SDS3YIL084C RPL28P02406 149 aaKnown RBP2.2□□□□□ -2.06
SDS3YIL084C YKE4P40544 346 aa2.2□□□□□ -2.06
SDS3YIL084C MRPS17Q03246 237 aaPredicted RBP2.2□□□□□ -2.06
SDS3YIL084C FCF2Q12035 217 aaPredicted RBP2.2□□□□□ -2.06
SDS3YIL084C DAD1Q12248 94 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms