RNA–Protein interactions for RNA: YHR172W

SPC97, Transcript of Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex, yeastyeast

Gene SPC97, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC97YHR172W DNA2P38859 1522 aa3.84□□□□□ -1.79
SPC97YHR172W RPA12P32529 125 aaKnown RBP3.84□□□□□ -1.8
SPC97YHR172W PAU2P32612 120 aa3.84□□□□□ -1.8
SPC97YHR172W HYR1P40581 163 aaKnown RBP3.84□□□□□ -1.8
SPC97YHR172W RPL22BP56628 122 aaKnown RBP3.84□□□□□ -1.8
SPC97YHR172W POC4Q12245 148 aaPredicted RBP3.84□□□□□ -1.8
SPC97YHR172W KRE1P17260 313 aa3.83□□□□□ -1.8
SPC97YHR172W CIS3P47001 227 aa3.83□□□□□ -1.8
SPC97YHR172W YDL157CQ12082 118 aa3.83□□□□□ -1.8
SPC97YHR172W ESP1Q03018 1630 aa3.83□□□□□ -1.8
SPC97YHR172W YBR209WP38311 105 aa3.83□□□□□ -1.8
SPC97YHR172W YJL027CP47063 138 aaPredicted RBP3.83□□□□□ -1.8
SPC97YHR172W MHF1Q3E835 90 aa3.83□□□□□ -1.8
SPC97YHR172W KRE9P39005 276 aa3.82□□□□□ -1.8
SPC97YHR172W YPR195CQ06594 109 aa3.82□□□□□ -1.8
SPC97YHR172W PRM3Q08931 133 aa3.82□□□□□ -1.8
SPC97YHR172W ENV10Q99382 181 aa3.82□□□□□ -1.8
SPC97YHR172W YHR213WP0CI67 198 aa3.81□□□□□ -1.8
SPC97YHR172W YPI1P43587 155 aa3.81□□□□□ -1.8
SPC97YHR172W YMR175W-AQ3E766 64 aa3.81□□□□□ -1.8
SPC97YHR172W SSS1P35179 80 aa3.81□□□□□ -1.8
SPC97YHR172W ATG8P38182 117 aaRIP-Chip data3.81□□□□□ -1.8not detected
SPC97YHR172W YFL051CP43552 160 aa3.81□□□□□ -1.8
SPC97YHR172W SNN1P48232 102 aa3.81□□□□□ -1.8
SPC97YHR172W SRB8P25648 1427 aa3.8□□□□□ -1.8
SPC97YHR172W PAU19P0CE85 124 aa3.8□□□□□ -1.8
SPC97YHR172W PAU3P25610 124 aa3.8□□□□□ -1.8
SPC97YHR172W PAU24P38155 120 aa3.8□□□□□ -1.8
SPC97YHR172W DAD4P69851 72 aa3.8□□□□□ -1.8
SPC97YHR172W RPS25AQ3E792 108 aaPredicted RBP3.8□□□□□ -1.8
SPC97YHR172W PCC1Q3E833 88 aa3.8□□□□□ -1.8
SPC97YHR172W YLR422WQ06409 1932 aa3.8□□□□□ -1.8
SPC97YHR172W FKS1P38631 1876 aaKnown RBP3.8□□□□□ -1.8
SPC97YHR172W MMS22Q06164 1454 aa3.8□□□□□ -1.8
SPC97YHR172W SOD1P00445 154 aaKnown RBP3.8□□□□□ -1.8
SPC97YHR172W RSM18P40033 138 aa3.8□□□□□ -1.8
SPC97YHR172W SIN3P22579 1536 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-DR5P0C2I2 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-DR6P0C2I3 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-LR2P0C2I5 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-LR3P0C2I6 1755 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W TY1B-PR1P0C2I9 1755 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W TY1B-PR3P0C2J1 1755 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W TY1B-JR1P47098 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-ML2Q03434 1755 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W TY1B-ER1Q03612 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-ML1Q04711 1755 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W TY1B-GR2Q12269 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-OLQ12273 1755 aa3.79□□□□□ -1.8
SPC97YHR172W TY1B-PLQ12414 1755 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W SWM2P40342 146 aa3.79□□□□□ -1.8
SPC97YHR172W XRN1P22147 1528 aaKnown RBP3.79□□□□□ -1.8
SPC97YHR172W RTC6O14464 93 aa3.79□□□□□ -1.8
SPC97YHR172W SEC11P15367 167 aa3.79□□□□□ -1.8
SPC97YHR172W YHL005CP38752 130 aa3.79□□□□□ -1.8
SPC97YHR172W GCV3P39726 170 aaPredicted RBP3.79□□□□□ -1.8
SPC97YHR172W YFL012WP43580 148 aa3.79□□□□□ -1.8
SPC97YHR172W TCB3Q03640 1545 aaKnown RBP3.78□□□□□ -1.8
SPC97YHR172W COX8P04039 78 aa3.78□□□□□ -1.8
SPC97YHR172W YMR030W-AQ3E760 96 aa3.78□□□□□ -1.8
SPC97YHR172W FAS2P19097 1887 aaKnown RBP3.78□□□□□ -1.8
SPC97YHR172W TOM6P33448 61 aa3.78□□□□□ -1.8
SPC97YHR172W POP3P53833 195 aaPredicted RBP3.78□□□□□ -1.8
SPC97YHR172W TY1B-GR3Q12316 1755 aa3.77□□□□□ -1.81
SPC97YHR172W TY1B-ORQ92393 1755 aa3.77□□□□□ -1.81
SPC97YHR172W GDB1Q06625 1536 aa3.77□□□□□ -1.81
SPC97YHR172W PAU16P35994 123 aa3.77□□□□□ -1.81
SPC97YHR172W YIR020CP40575 100 aa3.77□□□□□ -1.81
SPC97YHR172W PAU15P40585 124 aa3.77□□□□□ -1.81
SPC97YHR172W RGM1Q00453 211 aa3.77□□□□□ -1.81
SPC97YHR172W YIL014C-AQ02598 104 aa3.77□□□□□ -1.81
SPC97YHR172W ICY1Q04329 127 aa3.77□□□□□ -1.81
SPC97YHR172W YJL197C-AP0C5P0 93 aa3.76□□□□□ -1.81
SPC97YHR172W UTH1P36135 365 aa3.76□□□□□ -1.81
SPC97YHR172W MET31Q03081 177 aa3.76□□□□□ -1.81
SPC97YHR172W RPL36BO14455 100 aaKnown RBP3.76□□□□□ -1.81
SPC97YHR172W RPL36AP05745 100 aaPredicted RBP3.76□□□□□ -1.81
SPC97YHR172W VPS68Q12016 184 aa3.76□□□□□ -1.81
SPC97YHR172W RPL26AP05743 127 aaKnown RBP3.75□□□□□ -1.81
SPC97YHR172W RPB7P34087 171 aa3.75□□□□□ -1.81
SPC97YHR172W RPL26BP53221 127 aaKnown RBP3.75□□□□□ -1.81
SPC97YHR172W SEC7P11075 2009 aaKnown RBP3.75□□□□□ -1.81
SPC97YHR172W SRX1P36077 127 aa3.75□□□□□ -1.81
SPC97YHR172W YEL014CP39999 101 aa3.75□□□□□ -1.81
SPC97YHR172W CMC4Q3E7A9 73 aa3.75□□□□□ -1.81
SPC97YHR172W YLR194CQ05777 254 aa3.74□□□□□ -1.81
SPC97YHR172W YDR119W-AQ2V2P9 66 aa3.73□□□□□ -1.81
SPC97YHR172W ICS3P47034 131 aa3.73□□□□□ -1.81
SPC97YHR172W FIT2Q08906 153 aa3.73□□□□□ -1.81
SPC97YHR172W YLR419WQ06698 1435 aaKnown RBP3.73□□□□□ -1.81
SPC97YHR172W MON2P48563 1636 aaPredicted RBP3.73□□□□□ -1.81
SPC97YHR172W ATX1P38636 73 aa3.72□□□□□ -1.81
SPC97YHR172W COX23P38824 151 aa3.72□□□□□ -1.81
SPC97YHR172W HPA2Q06592 156 aa3.72□□□□□ -1.81
SPC97YHR172W YOL131WQ08270 108 aa3.72□□□□□ -1.81
SPC97YHR172W HAP1P0CE41 1502 aa3.72□□□□□ -1.81
SPC97YHR172W YDR114CQ04597 100 aa3.72□□□□□ -1.81
SPC97YHR172W HSP150P32478 413 aa3.71□□□□□ -1.81
SPC97YHR172W IMP2P46972 177 aa3.71□□□□□ -1.81
SPC97YHR172W IQG1Q12280 1495 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms