RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SPI1P40092 148 aa3.93□□□□□ -1.78
MSH1YHR120W DAD4P69851 72 aa3.93□□□□□ -1.78
MSH1YHR120W YML079WQ03629 201 aa3.93□□□□□ -1.78
MSH1YHR120W MRPL38P35996 138 aaPredicted RBP3.93□□□□□ -1.78
MSH1YHR120W RPF1P38805 295 aaKnown RBP3.93□□□□□ -1.78
MSH1YHR120W MIC26P50087 233 aa3.93□□□□□ -1.78
MSH1YHR120W DAD1Q12248 94 aa3.93□□□□□ -1.78
MSH1YHR120W RPL27AP0C2H6 136 aaKnown RBP3.92□□□□□ -1.78
MSH1YHR120W ERS1P17261 260 aa3.92□□□□□ -1.78
MSH1YHR120W MSN1P22148 382 aa3.92□□□□□ -1.78
MSH1YHR120W TIR2P33890 251 aa3.92□□□□□ -1.78
MSH1YHR120W TOS8P53147 276 aa3.92□□□□□ -1.78
MSH1YHR120W GPI19Q04082 140 aa3.92□□□□□ -1.78
MSH1YHR120W IRC23Q08416 157 aa3.92□□□□□ -1.78
MSH1YHR120W ADH2P00331 348 aaKnown RBP3.92□□□□□ -1.78
MSH1YHR120W RPL27BP0C2H7 136 aaKnown RBP3.92□□□□□ -1.78
MSH1YHR120W YJR096WP47137 282 aa3.92□□□□□ -1.78
MSH1YHR120W MGR2Q02889 113 aa3.92□□□□□ -1.78
MSH1YHR120W WIP1Q2V2P8 89 aa3.92□□□□□ -1.78
MSH1YHR120W YHR212W-AP0CX91 67 aa3.92□□□□□ -1.78
MSH1YHR120W MBB1P39534 108 aa3.92□□□□□ -1.78
MSH1YHR120W HUA1P40325 198 aa3.92□□□□□ -1.78
MSH1YHR120W YKL023C-AQ2V2P3 75 aa3.92□□□□□ -1.78
MSH1YHR120W CMC1P36064 111 aa3.91□□□□□ -1.78
MSH1YHR120W COX16P47081 118 aa3.91□□□□□ -1.78
MSH1YHR120W YGR219WP53307 113 aa3.91□□□□□ -1.78
MSH1YHR120W YIL014C-AQ02598 104 aa3.91□□□□□ -1.78
MSH1YHR120W MSC3Q05812 728 aa3.91□□□□□ -1.78
MSH1YHR120W PRM3Q08931 133 aa3.91□□□□□ -1.78
MSH1YHR120W YMR141CP40211 102 aa3.91□□□□□ -1.78
MSH1YHR120W YLR296WQ05898 108 aa3.91□□□□□ -1.78
MSH1YHR120W PET8P38921 284 aa3.9□□□□□ -1.78
MSH1YHR120W YMR181CQ03231 154 aa3.9□□□□□ -1.78
MSH1YHR120W YIL002W-AQ3E7Z5 69 aa3.9□□□□□ -1.78
MSH1YHR120W PFY1P07274 126 aa3.9□□□□□ -1.79
MSH1YHR120W YBR144CP34215 104 aa3.9□□□□□ -1.79
MSH1YHR120W APS1P35181 156 aa3.9□□□□□ -1.79
MSH1YHR120W AIM29P36154 155 aa3.9□□□□□ -1.79
MSH1YHR120W CAB4P53332 305 aa3.9□□□□□ -1.79
MSH1YHR120W IZH3Q07959 543 aa3.9□□□□□ -1.79
MSH1YHR120W YLR112WQ12130 139 aa3.9□□□□□ -1.79
MSH1YHR120W YIL102C-AQ2V2P5 75 aa3.9□□□□□ -1.79
MSH1YHR120W SCS22Q6Q595 175 aa3.9□□□□□ -1.79
MSH1YHR120W SAL1D6W196 494 aa3.89□□□□□ -1.79
MSH1YHR120W CPR1P14832 162 aaKnown RBP3.89□□□□□ -1.79
MSH1YHR120W YKR032WP36127 104 aa3.89□□□□□ -1.79
MSH1YHR120W FCF1Q05498 189 aaPredicted RBP3.89□□□□□ -1.79
MSH1YHR120W ANB1P19211 157 aa3.89□□□□□ -1.79
MSH1YHR120W MIC12P38341 106 aa3.89□□□□□ -1.79
MSH1YHR120W YNL194CP40169 301 aa3.89□□□□□ -1.79
MSH1YHR120W PAI3P01094 68 aa3.88□□□□□ -1.79
MSH1YHR120W ECM33P38248 429 aaKnown RBP3.88□□□□□ -1.79
MSH1YHR120W YHR140WP38842 239 aa3.88□□□□□ -1.79
MSH1YHR120W YER076CP40049 302 aa3.88□□□□□ -1.79
MSH1YHR120W YNL198CP40166 100 aa3.88□□□□□ -1.79
MSH1YHR120W MET32Q12041 191 aa3.88□□□□□ -1.79
MSH1YHR120W TOS6P48560 102 aa3.88□□□□□ -1.79
MSH1YHR120W YLR122CQ12312 125 aa3.88□□□□□ -1.79
MSH1YHR120W TIM22Q12328 207 aa3.88□□□□□ -1.79
MSH1YHR120W SOH1P38633 127 aa3.87□□□□□ -1.79
MSH1YHR120W AQY1P0CD91 305 aa3.87□□□□□ -1.79
MSH1YHR120W YPL073CP40323 161 aa3.87□□□□□ -1.79
MSH1YHR120W MST27P53176 234 aa3.87□□□□□ -1.79
MSH1YHR120W MST28P39552 234 aa3.86□□□□□ -1.79
MSH1YHR120W POR2P40478 281 aa3.86□□□□□ -1.79
MSH1YHR120W MRPL49P40858 161 aaPredicted RBP3.86□□□□□ -1.79
MSH1YHR120W LCB3P47013 409 aa3.86□□□□□ -1.79
MSH1YHR120W UBC7Q02159 165 aa3.86□□□□□ -1.79
MSH1YHR120W YMR103CQ04436 120 aa3.86□□□□□ -1.79
MSH1YHR120W RUB1Q03919 77 aa3.86□□□□□ -1.79
MSH1YHR120W ATG39Q06159 398 aa3.86□□□□□ -1.79
MSH1YHR120W ARO2P28777 376 aaKnown RBP3.85□□□□□ -1.79
MSH1YHR120W CIN5P40917 295 aa3.85□□□□□ -1.79
MSH1YHR120W CAX4P53223 239 aa3.85□□□□□ -1.79
MSH1YHR120W NCE103P53615 221 aa3.85□□□□□ -1.79
MSH1YHR120W DGA1Q08650 418 aa3.85□□□□□ -1.79
MSH1YHR120W YKR041WP36134 250 aa3.85□□□□□ -1.79
MSH1YHR120W YOL160WQ08321 113 aa3.85□□□□□ -1.79
MSH1YHR120W GEP3Q08622 556 aa3.85□□□□□ -1.79
MSH1YHR120W YPR013CQ12145 317 aa3.85□□□□□ -1.79
MSH1YHR120W PCL2P25693 308 aa3.84□□□□□ -1.79
MSH1YHR120W YKL070WP36087 169 aa3.84□□□□□ -1.79
MSH1YHR120W POP7P38291 140 aa3.84□□□□□ -1.79
MSH1YHR120W SNF11P38956 169 aa3.84□□□□□ -1.79
MSH1YHR120W DFM1Q12743 341 aaKnown RBP3.84□□□□□ -1.79
MSH1YHR120W COA3Q3E7B2 85 aa3.84□□□□□ -1.79
MSH1YHR120W TAR1Q8TGM6 124 aa3.84□□□□□ -1.79
MSH1YHR120W SNU13P39990 126 aaKnown RBP3.84□□□□□ -1.79
MSH1YHR120W MPC2P38857 129 aa3.84□□□□□ -1.8
MSH1YHR120W DUT1P33317 147 aa3.83□□□□□ -1.8
MSH1YHR120W SCW10Q04951 389 aa3.83□□□□□ -1.8
MSH1YHR120W CCW12Q12127 133 aa3.83□□□□□ -1.8
MSH1YHR120W MDN1Q12019 4910 aaKnown RBP3.83□□□□□ -1.8
MSH1YHR120W HYP2P23301 157 aaKnown RBP3.83□□□□□ -1.8
MSH1YHR120W YDR274CP87283 123 aa3.83□□□□□ -1.8
MSH1YHR120W ELC1Q03071 99 aa3.83□□□□□ -1.8
MSH1YHR120W YLR281CQ05863 155 aa3.83□□□□□ -1.8
MSH1YHR120W DIA1P54005 336 aa3.82□□□□□ -1.8
MSH1YHR120W RPL42AP0CX27 106 aaKnown RBP3.82□□□□□ -1.8
MSH1YHR120W RPL42BP0CX28 106 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms