RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W CCW14O13547 238 aa-0.57□□□□□ -2.5
RPF1YHR088W RPA12P32529 125 aaKnown RBP-0.57□□□□□ -2.5
RPF1YHR088W PHS1P40857 217 aa-0.57□□□□□ -2.5
RPF1YHR088W HPA2Q06592 156 aa-0.57□□□□□ -2.5
RPF1YHR088W VPS55P47111 140 aa-0.58□□□□□ -2.5
RPF1YHR088W MOG1P47123 218 aa-0.58□□□□□ -2.5
RPF1YHR088W YIL014C-AQ02598 104 aa-0.58□□□□□ -2.5
RPF1YHR088W ELC1Q03071 99 aa-0.58□□□□□ -2.5
RPF1YHR088W GAT4P40569 121 aa-0.59□□□□□ -2.5
RPF1YHR088W TVP18Q04767 167 aa-0.59□□□□□ -2.5
RPF1YHR088W YLR285C-AQ3E771 56 aa-0.59□□□□□ -2.5
RPF1YHR088W SEC7P11075 2009 aaKnown RBP-0.59□□□□□ -2.5
RPF1YHR088W YPK9Q12697 1472 aa-0.6□□□□□ -2.5
RPF1YHR088W ARC19P33204 171 aaKnown RBP-0.6□□□□□ -2.51
RPF1YHR088W GCV3P39726 170 aaPredicted RBP-0.6□□□□□ -2.51
RPF1YHR088W ERV14P53173 138 aa-0.6□□□□□ -2.51
RPF1YHR088W ECM5Q03214 1411 aa-0.61□□□□□ -2.51
RPF1YHR088W SEC59P20048 519 aa-0.61□□□□□ -2.51
RPF1YHR088W RBL2P48606 106 aaKnown RBP-0.61□□□□□ -2.51
RPF1YHR088W SMD2Q06217 110 aaKnown RBP-0.61□□□□□ -2.51
RPF1YHR088W YNL277W-AQ3E7Z0 62 aa-0.61□□□□□ -2.51
RPF1YHR088W TY4B-HP0C2J7 1802 aa-0.61□□□□□ -2.51
RPF1YHR088W URB1P34241 1764 aaKnown RBP-0.62□□□□□ -2.51
RPF1YHR088W MPC1P53157 130 aaKnown RBP-0.62□□□□□ -2.51
RPF1YHR088W YKL044WP36092 106 aa-0.63□□□□□ -2.51
RPF1YHR088W COX23P38824 151 aa-0.63□□□□□ -2.51
RPF1YHR088W CYB5P40312 120 aa-0.63□□□□□ -2.51
RPF1YHR088W PAU12P53343 120 aa-0.63□□□□□ -2.51
RPF1YHR088W SLO1Q3E784 85 aa-0.63□□□□□ -2.51
RPF1YHR088W YOR376W-AQ3E805 51 aa-0.63□□□□□ -2.51
RPF1YHR088W UTP20P35194 2493 aaKnown RBP-0.63□□□□□ -2.51
RPF1YHR088W RPC19P28000 142 aaKnown RBP-0.64□□□□□ -2.51
RPF1YHR088W YIR020CP40575 100 aa-0.64□□□□□ -2.51
RPF1YHR088W SFT1P43682 97 aa-0.64□□□□□ -2.51
RPF1YHR088W GPI19Q04082 140 aa-0.64□□□□□ -2.51
RPF1YHR088W CNL1Q06333 122 aa-0.64□□□□□ -2.51
RPF1YHR088W TLG1Q03322 224 aa-0.65□□□□□ -2.51
RPF1YHR088W OST5Q92316 86 aa-0.65□□□□□ -2.51
RPF1YHR088W YIL086CP40503 102 aa-0.66□□□□□ -2.52
RPF1YHR088W YBR016WP38216 128 aa-0.67□□□□□ -2.52
RPF1YHR088W SHU1P38751 150 aa-0.67□□□□□ -2.52
RPF1YHR088W Q0144Q9ZZW2 109 aa-0.67□□□□□ -2.52
RPF1YHR088W YRF1-6P53819 1859 aa-0.67□□□□□ -2.52
RPF1YHR088W DNA2P38859 1522 aa-0.68□□□□□ -2.52
RPF1YHR088W HYM1P32464 399 aa-0.68□□□□□ -2.52
RPF1YHR088W RPS20P38701 121 aaKnown RBP-0.68□□□□□ -2.52
RPF1YHR088W YHR130CP38834 111 aa-0.68□□□□□ -2.52
RPF1YHR088W YGR042WP53227 271 aa-0.68□□□□□ -2.52
RPF1YHR088W YDR210WQ03482 75 aa-0.68□□□□□ -2.52
RPF1YHR088W YDR278CQ05612 105 aa-0.68□□□□□ -2.52
RPF1YHR088W YPL261CQ08976 102 aa-0.68□□□□□ -2.52
RPF1YHR088W YCL048W-AQ2V2Q2 79 aa-0.68□□□□□ -2.52
RPF1YHR088W YLR363W-AQ3E747 85 aa-0.68□□□□□ -2.52
RPF1YHR088W PCC1Q3E833 88 aa-0.68□□□□□ -2.52
RPF1YHR088W SNF11P38956 169 aa-0.69□□□□□ -2.52
RPF1YHR088W RPL22BP56628 122 aaKnown RBP-0.69□□□□□ -2.52
RPF1YHR088W COX19Q3E731 98 aa-0.69□□□□□ -2.52
RPF1YHR088W TOP2P06786 1428 aaKnown RBP-0.7□□□□□ -2.52
RPF1YHR088W ADK1P07170 222 aaKnown RBP-0.7□□□□□ -2.52
RPF1YHR088W RPS11AP0CX47 156 aaKnown RBP-0.7□□□□□ -2.52
RPF1YHR088W RPS11BP0CX48 156 aaKnown RBP-0.7□□□□□ -2.52
RPF1YHR088W ACP1P32463 125 aa-0.7□□□□□ -2.52
RPF1YHR088W PAU24P38155 120 aa-0.7□□□□□ -2.52
RPF1YHR088W RPO41P13433 1351 aaKnown RBP-0.7□□□□□ -2.52
RPF1YHR088W HMRA2P0CY13 119 aa-0.71□□□□□ -2.52
RPF1YHR088W YER187WP40102 141 aa-0.71□□□□□ -2.52
RPF1YHR088W PAU2P32612 120 aa-0.72□□□□□ -2.52
RPF1YHR088W ATX1P38636 73 aa-0.72□□□□□ -2.52
RPF1YHR088W MPC2P38857 129 aa-0.72□□□□□ -2.52
RPF1YHR088W CYC2P38909 366 aa-0.72□□□□□ -2.52
RPF1YHR088W GIM4P40005 111 aaKnown RBP-0.72□□□□□ -2.52
RPF1YHR088W CSN9Q03981 162 aa-0.72□□□□□ -2.52
RPF1YHR088W YOR097CQ12274 175 aaPredicted RBP-0.72□□□□□ -2.52
RPF1YHR088W SEN1Q00416 2231 aaKnown RBP-0.72□□□□□ -2.53
RPF1YHR088W RIM15P43565 1770 aa-0.73□□□□□ -2.53
RPF1YHR088W PAM16P42949 149 aa-0.73□□□□□ -2.53
RPF1YHR088W SNN1P48232 102 aa-0.73□□□□□ -2.53
RPF1YHR088W TIM8P57744 87 aa-0.73□□□□□ -2.53
RPF1YHR088W FMP27Q06179 2628 aa-0.73□□□□□ -2.53
RPF1YHR088W TOR2P32600 2474 aaKnown RBP-0.74□□□□□ -2.53
RPF1YHR088W YLR361C-AQ3E795 98 aa-0.74□□□□□ -2.53
RPF1YHR088W RAD50P12753 1312 aa-0.74□□□□□ -2.53
RPF1YHR088W YFR009W-AP0C5M9 85 aa-0.75□□□□□ -2.53
RPF1YHR088W YNL198CP40166 100 aa-0.75□□□□□ -2.53
RPF1YHR088W IMP2P46972 177 aa-0.75□□□□□ -2.53
RPF1YHR088W YGR164WP53291 111 aa-0.75□□□□□ -2.53
RPF1YHR088W SAE3P89114 91 aa-0.75□□□□□ -2.53
RPF1YHR088W SGF11Q03067 99 aa-0.75□□□□□ -2.53
RPF1YHR088W FRQ1Q06389 190 aa-0.76□□□□□ -2.53
RPF1YHR088W LSM6Q06406 86 aaKnown RBP-0.76□□□□□ -2.53
RPF1YHR088W DYN1P36022 4092 aa-0.77□□□□□ -2.53
RPF1YHR088W POP7P38291 140 aa-0.77□□□□□ -2.53
RPF1YHR088W RSF2P46974 1380 aa-0.78□□□□□ -2.53
RPF1YHR088W PAU19P0CE85 124 aa-0.78□□□□□ -2.53
RPF1YHR088W YCR101CP25607 182 aa-0.78□□□□□ -2.53
RPF1YHR088W PAU3P25610 124 aa-0.78□□□□□ -2.53
RPF1YHR088W MRPL38P35996 138 aaPredicted RBP-0.78□□□□□ -2.53
RPF1YHR088W YOL118CQ08259 102 aa-0.78□□□□□ -2.53
RPF1YHR088W DAD1Q12248 94 aa-0.78□□□□□ -2.53
RPF1YHR088W MYO2P19524 1574 aaKnown RBP-0.79□□□□□ -2.54
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms