RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	RPL27A	P0C2H6	136 aa	Known RBP	3.49	□□□□□ -1.85
RSC30	YHR056C	YBL081W	P38180	368 aa	Known RBP	3.49	□□□□□ -1.85
RSC30	YHR056C	YAL064W	P39711	94 aa		3.49	□□□□□ -1.85
RSC30	YHR056C	VTC1	P40046	129 aa	RIP-Chip data	3.49	□□□□□ -1.85	not detected
RSC30	YHR056C	TVP18	Q04767	167 aa		3.49	□□□□□ -1.85
RSC30	YHR056C	ANT1	Q06497	328 aa		3.49	□□□□□ -1.85
RSC30	YHR056C	CKS1	P20486	150 aa	Known RBP	3.49	□□□□□ -1.85
RSC30	YHR056C	YJR111C	P47148	283 aa	Known RBP	3.49	□□□□□ -1.85
RSC30	YHR056C	YDL241W	Q07738	123 aa		3.49	□□□□□ -1.85
RSC30	YHR056C	YLR118C	Q12354	227 aa		3.49	□□□□□ -1.85
RSC30	YHR056C	MRPS9	P38120	278 aa		3.48	□□□□□ -1.85
RSC30	YHR056C	SRP21	P32342	167 aa		3.48	□□□□□ -1.85
RSC30	YHR056C	YFL019C	P43576	117 aa		3.48	□□□□□ -1.85
RSC30	YHR056C	DXO1	Q06349	442 aa		3.48	□□□□□ -1.85
RSC30	YHR056C	SME1	Q12330	94 aa	Predicted RBP	3.47	□□□□□ -1.85
RSC30	YHR056C	PAU1	P0CE88	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU14	P0CE89	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU6	P0CE90	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU18	P0CE91	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU8	P0CE92	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU11	P0CE93	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	MAG1	P22134	296 aa	Known RBP	3.47	□□□□□ -1.85
RSC30	YHR056C	PAU13	P38725	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	DCV1	P43595	202 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU10	Q03050	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU20	Q08322	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PAU9	Q3E770	120 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	GCV3	P39726	170 aa	Predicted RBP	3.47	□□□□□ -1.85
RSC30	YHR056C	HUA1	P40325	198 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	PGD1	P40356	397 aa		3.47	□□□□□ -1.85
RSC30	YHR056C	DAN1	P47178	298 aa		3.46	□□□□□ -1.86
RSC30	YHR056C	YOR015W	Q12169	119 aa		3.46	□□□□□ -1.86
RSC30	YHR056C	TRP1	P00912	224 aa		3.46	□□□□□ -1.86
RSC30	YHR056C	VMA7	P39111	118 aa		3.46	□□□□□ -1.86
RSC30	YHR056C	YIL163C	P40448	117 aa		3.46	□□□□□ -1.86
RSC30	YHR056C	GIM5	Q04493	163 aa		3.46	□□□□□ -1.86
RSC30	YHR056C	CSM4	Q08955	156 aa		3.45	□□□□□ -1.86
RSC30	YHR056C	FZF1	P32805	299 aa		3.45	□□□□□ -1.86
RSC30	YHR056C	YGL149W	P53116	101 aa		3.45	□□□□□ -1.86
RSC30	YHR056C	NAT3	Q06504	195 aa		3.45	□□□□□ -1.86
RSC30	YHR056C	COX19	Q3E731	98 aa		3.45	□□□□□ -1.86
RSC30	YHR056C	SAR1	P20606	190 aa	Known RBP	3.44	□□□□□ -1.86
RSC30	YHR056C	ARC18	Q05933	178 aa	Known RBP	3.44	□□□□□ -1.86
RSC30	YHR056C	YGR149W	P48236	432 aa		3.44	□□□□□ -1.86
RSC30	YHR056C	MSK1	P32048	576 aa		3.43	□□□□□ -1.86
RSC30	YHR056C	PAU7	P39545	55 aa		3.43	□□□□□ -1.86
RSC30	YHR056C	PAU5	P43575	122 aa		3.43	□□□□□ -1.86
RSC30	YHR056C	ADD37	Q03233	198 aa		3.43	□□□□□ -1.86
RSC30	YHR056C	QRI5	P32344	111 aa		3.42	□□□□□ -1.86
RSC30	YHR056C	RPB11	P38902	120 aa		3.42	□□□□□ -1.86
RSC30	YHR056C	GLO1	P50107	326 aa		3.42	□□□□□ -1.86
RSC30	YHR056C	GTO3	Q04806	366 aa		3.42	□□□□□ -1.86
RSC30	YHR056C	YKR070W	P36151	352 aa	Known RBP	3.42	□□□□□ -1.86
RSC30	YHR056C	TAD2	P47058	250 aa		3.42	□□□□□ -1.86
RSC30	YHR056C	POM33	Q12164	279 aa		3.41	□□□□□ -1.86
RSC30	YHR056C	STF1	P01098	86 aa		3.4	□□□□□ -1.86
RSC30	YHR056C	HMRA1	P0CY11	126 aa		3.4	□□□□□ -1.86
RSC30	YHR056C	ZRT1	P32804	376 aa		3.4	□□□□□ -1.86
RSC30	YHR056C	ERG27	Q12452	347 aa	Known RBP	3.4	□□□□□ -1.86
RSC30	YHR056C	YLR156W	P0CE96	114 aa		3.4	□□□□□ -1.87
RSC30	YHR056C	YLR159W	P0CE97	114 aa		3.4	□□□□□ -1.87
RSC30	YHR056C	YLR161W	P0CE98	114 aa		3.4	□□□□□ -1.87
RSC30	YHR056C	LAC1	P28496	418 aa		3.4	□□□□□ -1.87
RSC30	YHR056C	THG1	P53215	237 aa	Known RBP	3.4	□□□□□ -1.87
RSC30	YHR056C	SMT3	Q12306	101 aa	Known RBP	3.39	□□□□□ -1.87
RSC30	YHR056C	UBC4	P15731	148 aa		3.39	□□□□□ -1.87
RSC30	YHR056C	SDH8	P38345	138 aa		3.38	□□□□□ -1.87
RSC30	YHR056C	PLP1	Q04004	230 aa		3.38	□□□□□ -1.87
RSC30	YHR056C	KTI11	Q3E840	82 aa		3.38	□□□□□ -1.87
RSC30	YHR056C	ADH2	P00331	348 aa	Known RBP	3.38	□□□□□ -1.87
RSC30	YHR056C	YER039C-A	P0CD97	72 aa		3.38	□□□□□ -1.87
RSC30	YHR056C	AIM29	P36154	155 aa		3.38	□□□□□ -1.87
RSC30	YHR056C	YCL001W-B	Q96VH2	84 aa		3.38	□□□□□ -1.87
RSC30	YHR056C	YBR209W	P38311	105 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	CWP2	P43497	92 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	YJR146W	P47174	117 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	YCL021W-A	Q96VH3	125 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	APS1	P35181	156 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	YGL193C	P53097	103 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	SRP14	P38985	146 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	EOS1	P53938	366 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	YDR042C	Q03205	200 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	YOR268C	Q08734	132 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	KSH1	Q8TGJ3	72 aa		3.37	□□□□□ -1.87
RSC30	YHR056C	YAL065C	O13511	128 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	SPG1	P50088	95 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	KNH1	P50112	268 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	DCN1	Q12395	269 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.36	□□□□□ -1.87
RSC30	YHR056C	AQY2	P0CD90	149 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-DR6	P0CX70	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-ER1	P0CX71	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-LR2	P0CX72	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-PL	P0CX73	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-JR1	P0CX74	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-LR3	P0CX75	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-ML2	P0CX76	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	YKL070W	P36087	169 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-GR1	Q12085	440 aa		3.36	□□□□□ -1.87
RSC30	YHR056C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.36	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms