RNA–Protein interactions for RNA: YGR275W

RTT102, Transcript of Component of both the SWI/SNF and RSC chromatin remodeling complexes, yeastyeast

Gene RTT102, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT102YGR275W ODC2Q99297 307 aa0.69□□□□□ -2.3
RTT102YGR275W VAR1P02381 398 aa0.68□□□□□ -2.3
RTT102YGR275W YLR156WP0CE96 114 aa0.68□□□□□ -2.3
RTT102YGR275W YLR159WP0CE97 114 aa0.68□□□□□ -2.3
RTT102YGR275W YLR161WP0CE98 114 aa0.68□□□□□ -2.3
RTT102YGR275W AHC2P25649 128 aa0.68□□□□□ -2.3
RTT102YGR275W FPR2P32472 135 aa0.68□□□□□ -2.3
RTT102YGR275W DOC1P53068 250 aa0.68□□□□□ -2.3
RTT102YGR275W YDR366CP87287 132 aa0.68□□□□□ -2.3
RTT102YGR275W FRQ1Q06389 190 aa0.68□□□□□ -2.3
RTT102YGR275W PAM18Q07914 168 aa0.68□□□□□ -2.3
RTT102YGR275W QCR7P00128 127 aa0.67□□□□□ -2.3
RTT102YGR275W SFT2P38166 215 aa0.67□□□□□ -2.3
RTT102YGR275W BFR1P38934 470 aaKnown RBP RIP-Chip data0.67□□□□□ -2.3not detected
RTT102YGR275W GVP36P40531 326 aaKnown RBP0.67□□□□□ -2.3
RTT102YGR275W CIN5P40917 295 aa0.67□□□□□ -2.3
RTT102YGR275W AIM34Q03673 198 aa0.67□□□□□ -2.3
RTT102YGR275W YLR194CQ05777 254 aa0.67□□□□□ -2.3
RTT102YGR275W DGA1Q08650 418 aa0.67□□□□□ -2.3
RTT102YGR275W YMR122W-AQ3E842 84 aa0.67□□□□□ -2.3
RTT102YGR275W SHB17P36136 271 aaKnown RBP0.66□□□□□ -2.3
RTT102YGR275W LSM2P38203 95 aaKnown RBP0.66□□□□□ -2.3
RTT102YGR275W HTD2P38790 280 aaKnown RBP0.66□□□□□ -2.3
RTT102YGR275W NVJ1P38881 321 aa0.66□□□□□ -2.3
RTT102YGR275W YAL064WP39711 94 aa0.66□□□□□ -2.3
RTT102YGR275W ERG28P40030 148 aa0.66□□□□□ -2.3
RTT102YGR275W RTT105P40063 208 aa0.66□□□□□ -2.3
RTT102YGR275W SPI1P40092 148 aa0.66□□□□□ -2.3
RTT102YGR275W RPS29BP41058 56 aaKnown RBP0.66□□□□□ -2.3
RTT102YGR275W BNA6P43619 295 aa0.66□□□□□ -2.3
RTT102YGR275W BRP1P53194 125 aa0.66□□□□□ -2.3
RTT102YGR275W GRX5Q02784 150 aa0.66□□□□□ -2.3
RTT102YGR275W SCP1Q08873 200 aa0.66□□□□□ -2.3
RTT102YGR275W POC4Q12245 148 aaPredicted RBP0.66□□□□□ -2.3
RTT102YGR275W ECM12O13529 151 aa0.65□□□□□ -2.31
RTT102YGR275W QCR8P08525 94 aa0.65□□□□□ -2.31
RTT102YGR275W FCY2P17064 533 aa0.65□□□□□ -2.31
RTT102YGR275W SEC59P20048 519 aa0.65□□□□□ -2.31
RTT102YGR275W YCR023CP25351 611 aa0.65□□□□□ -2.31
RTT102YGR275W MRP17P28778 131 aa0.65□□□□□ -2.31
RTT102YGR275W PET100P38958 111 aa0.65□□□□□ -2.31
RTT102YGR275W MSS2P40990 351 aa0.65□□□□□ -2.31
RTT102YGR275W CWC23P52868 283 aaPredicted RBP0.65□□□□□ -2.31
RTT102YGR275W PMP3P87284 55 aa0.65□□□□□ -2.31
RTT102YGR275W YLR031WQ07978 186 aa0.65□□□□□ -2.31
RTT102YGR275W RDI1Q12434 202 aa0.65□□□□□ -2.31
RTT102YGR275W YBR200W-AQ3E755 54 aa0.65□□□□□ -2.31
RTT102YGR275W KSH1Q8TGJ3 72 aa0.65□□□□□ -2.31
RTT102YGR275W PET20Q99373 253 aa0.65□□□□□ -2.31
RTT102YGR275W HTL1Q9URQ5 78 aa0.65□□□□□ -2.31
RTT102YGR275W YDR157WA0A023PZE8 133 aa0.64□□□□□ -2.31
RTT102YGR275W RPS25BP0C0T4 108 aaKnown RBP0.64□□□□□ -2.31
RTT102YGR275W UBC5P15732 148 aa0.64□□□□□ -2.31
RTT102YGR275W CDC10P25342 322 aaKnown RBP0.64□□□□□ -2.31
RTT102YGR275W MIC27P50945 234 aa0.64□□□□□ -2.31
RTT102YGR275W GIM3P53900 129 aa0.64□□□□□ -2.31
RTT102YGR275W SYM1Q06563 197 aa0.64□□□□□ -2.31
RTT102YGR275W ATG41Q12048 136 aa0.64□□□□□ -2.31
RTT102YGR275W YCT1Q12235 531 aa0.64□□□□□ -2.31
RTT102YGR275W YGL041C-BQ3E750 60 aa0.64□□□□□ -2.31
RTT102YGR275W RPS25AQ3E792 108 aaPredicted RBP0.64□□□□□ -2.31
RTT102YGR275W PCC1Q3E833 88 aa0.64□□□□□ -2.31
RTT102YGR275W HTB2P02294 131 aa0.63□□□□□ -2.31
RTT102YGR275W QCR2P07257 368 aa0.63□□□□□ -2.31
RTT102YGR275W PAN3P36102 679 aaPredicted RBP0.63□□□□□ -2.31
RTT102YGR275W GOS1P38736 223 aa0.63□□□□□ -2.31
RTT102YGR275W RPC10P40422 70 aa0.63□□□□□ -2.31
RTT102YGR275W YIL163CP40448 117 aa0.63□□□□□ -2.31
RTT102YGR275W RPL37AP49166 88 aaKnown RBP0.63□□□□□ -2.31
RTT102YGR275W VPS28Q02767 242 aa0.63□□□□□ -2.31
RTT102YGR275W SHH3Q04487 196 aa0.63□□□□□ -2.31
RTT102YGR275W YOR020W-AQ3E824 90 aa0.63□□□□□ -2.31
RTT102YGR275W MRP49P32388 137 aa0.62□□□□□ -2.31
RTT102YGR275W RPF1P38805 295 aaKnown RBP0.62□□□□□ -2.31
RTT102YGR275W EGD2P38879 174 aaKnown RBP0.62□□□□□ -2.31
RTT102YGR275W SER2P42941 309 aa0.62□□□□□ -2.31
RTT102YGR275W CWP2P43497 92 aa0.62□□□□□ -2.31
RTT102YGR275W YFL019CP43576 117 aa0.62□□□□□ -2.31
RTT102YGR275W LSM1P47017 172 aaKnown RBP0.62□□□□□ -2.31
RTT102YGR275W PDR17P53844 350 aa0.62□□□□□ -2.31
RTT102YGR275W KEI1Q06346 221 aa0.62□□□□□ -2.31
RTT102YGR275W FIT2Q08906 153 aa0.62□□□□□ -2.31
RTT102YGR275W YKL068W-AQ3E826 78 aa0.62□□□□□ -2.31
RTT102YGR275W MRS1P07266 363 aa0.61□□□□□ -2.31
RTT102YGR275W GCN3P14741 305 aa0.61□□□□□ -2.31
RTT102YGR275W HSP12P22943 109 aaKnown RBP0.61□□□□□ -2.31
RTT102YGR275W FZF1P32805 299 aa0.61□□□□□ -2.31
RTT102YGR275W DER1P38307 211 aa0.61□□□□□ -2.31
RTT102YGR275W YHR173CP38864 112 aa0.61□□□□□ -2.31
RTT102YGR275W YMR141CP40211 102 aa0.61□□□□□ -2.31
RTT102YGR275W SWM2P40342 146 aa0.61□□□□□ -2.31
RTT102YGR275W MAK3Q03503 176 aa0.61□□□□□ -2.31
RTT102YGR275W YMR090WQ04304 227 aaKnown RBP0.61□□□□□ -2.31
RTT102YGR275W YLR342W-AQ3E810 57 aa0.61□□□□□ -2.31
RTT102YGR275W ENV10Q99382 181 aa0.61□□□□□ -2.31
RTT102YGR275W Q0032Q9ZZX7 96 aa0.61□□□□□ -2.31
RTT102YGR275W UGX2P32772 223 aa0.6□□□□□ -2.31
RTT102YGR275W MRPL24P36525 258 aaPredicted RBP0.6□□□□□ -2.31
RTT102YGR275W YHL018WP38744 120 aaPredicted RBP0.6□□□□□ -2.31
RTT102YGR275W SEC72P39742 193 aaKnown RBP0.6□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms