RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W SPC3Q12133 184 aa-0.15□□□□□ -2.43
CUL3YGR003W RPL22AP05749 121 aaKnown RBP-0.16□□□□□ -2.44
CUL3YGR003W YHR173CP38864 112 aa-0.16□□□□□ -2.44
CUL3YGR003W PAM16P42949 149 aa-0.16□□□□□ -2.44
CUL3YGR003W YDR366CP87287 132 aa-0.16□□□□□ -2.44
CUL3YGR003W CSN9Q03981 162 aa-0.16□□□□□ -2.44
CUL3YGR003W SDH7Q04401 133 aa-0.16□□□□□ -2.44
CUL3YGR003W PFY1P07274 126 aa-0.17□□□□□ -2.44
CUL3YGR003W HMRA2P0CY13 119 aa-0.17□□□□□ -2.44
CUL3YGR003W MRPL44P19956 98 aa-0.17□□□□□ -2.44
CUL3YGR003W PAU24P38155 120 aa-0.17□□□□□ -2.44
CUL3YGR003W COX23P38824 151 aa-0.17□□□□□ -2.44
CUL3YGR003W RBL2P48606 106 aaKnown RBP-0.17□□□□□ -2.44
CUL3YGR003W YOR097CQ12274 175 aaPredicted RBP-0.17□□□□□ -2.44
CUL3YGR003W RPL36BO14455 100 aaKnown RBP-0.17□□□□□ -2.44
CUL3YGR003W QCR6P00127 147 aa-0.17□□□□□ -2.44
CUL3YGR003W RPL36AP05745 100 aaPredicted RBP-0.17□□□□□ -2.44
CUL3YGR003W ERV14P53173 138 aa-0.17□□□□□ -2.44
CUL3YGR003W YDR010CQ12426 110 aa-0.17□□□□□ -2.44
CUL3YGR003W MED11Q99278 115 aa-0.17□□□□□ -2.44
CUL3YGR003W YOR1P53049 1477 aa-0.17□□□□□ -2.44
CUL3YGR003W YRF1-6P53819 1859 aa-0.18□□□□□ -2.44
CUL3YGR003W PAU2P32612 120 aa-0.18□□□□□ -2.44
CUL3YGR003W ARC19P33204 171 aaKnown RBP-0.18□□□□□ -2.44
CUL3YGR003W SNF11P38956 169 aa-0.18□□□□□ -2.44
CUL3YGR003W RAV2Q03956 351 aa-0.18□□□□□ -2.44
CUL3YGR003W GPI19Q04082 140 aa-0.18□□□□□ -2.44
CUL3YGR003W GCV3P39726 170 aaPredicted RBP-0.18□□□□□ -2.44
CUL3YGR003W PHS1P40857 217 aa-0.18□□□□□ -2.44
CUL3YGR003W YGR039WP53225 103 aa-0.18□□□□□ -2.44
CUL3YGR003W TIM8P57744 87 aa-0.18□□□□□ -2.44
CUL3YGR003W TLG1Q03322 224 aa-0.18□□□□□ -2.44
CUL3YGR003W ATP14Q12349 124 aa-0.18□□□□□ -2.44
CUL3YGR003W PCC1Q3E833 88 aa-0.18□□□□□ -2.44
CUL3YGR003W DNA2P38859 1522 aa-0.19□□□□□ -2.44
CUL3YGR003W SEC59P20048 519 aa-0.19□□□□□ -2.44
CUL3YGR003W SFT1P43682 97 aa-0.19□□□□□ -2.44
CUL3YGR003W VPS55P47111 140 aa-0.19□□□□□ -2.44
CUL3YGR003W YNL190WP53872 204 aa-0.19□□□□□ -2.44
CUL3YGR003W CCW14O13547 238 aa-0.19□□□□□ -2.44
CUL3YGR003W YGL041C-BQ3E750 60 aa-0.19□□□□□ -2.44
CUL3YGR003W TRM732Q03496 1420 aa-0.2□□□□□ -2.44
CUL3YGR003W GAT4P40569 121 aa-0.2□□□□□ -2.44
CUL3YGR003W SPG1P50088 95 aa-0.2□□□□□ -2.44
CUL3YGR003W OCA6Q12454 224 aa-0.2□□□□□ -2.44
CUL3YGR003W CYC2P38909 366 aa-0.21□□□□□ -2.44
CUL3YGR003W ACP1P32463 125 aa-0.22□□□□□ -2.44
CUL3YGR003W GIM4P40005 111 aaKnown RBP-0.22□□□□□ -2.44
CUL3YGR003W YIR020CP40575 100 aa-0.22□□□□□ -2.44
CUL3YGR003W SAE3P89114 91 aa-0.22□□□□□ -2.44
CUL3YGR003W SPC24Q04477 213 aa-0.22□□□□□ -2.44
CUL3YGR003W YBR072C-AQ3E794 53 aa-0.22□□□□□ -2.44
CUL3YGR003W ECM5Q03214 1411 aa-0.22□□□□□ -2.44
CUL3YGR003W RAD50P12753 1312 aa-0.22□□□□□ -2.44
CUL3YGR003W SHU1P38751 150 aa-0.22□□□□□ -2.45
CUL3YGR003W CNL1Q06333 122 aa-0.22□□□□□ -2.45
CUL3YGR003W YPL261CQ08976 102 aa-0.22□□□□□ -2.45
CUL3YGR003W YNL277W-AQ3E7Z0 62 aa-0.22□□□□□ -2.45
CUL3YGR003W ADK1P07170 222 aaKnown RBP-0.23□□□□□ -2.45
CUL3YGR003W YJL197C-AP0C5P0 93 aa-0.23□□□□□ -2.45
CUL3YGR003W PAU19P0CE85 124 aa-0.23□□□□□ -2.45
CUL3YGR003W PAU3P25610 124 aa-0.23□□□□□ -2.45
CUL3YGR003W ICS3P47034 131 aa-0.23□□□□□ -2.45
CUL3YGR003W TDA2P40045 126 aa-0.23□□□□□ -2.45
CUL3YGR003W SNN1P48232 102 aa-0.23□□□□□ -2.45
CUL3YGR003W YGR042WP53227 271 aa-0.23□□□□□ -2.45
CUL3YGR003W OST5Q92316 86 aa-0.23□□□□□ -2.45
CUL3YGR003W YFR009W-AP0C5M9 85 aa-0.24□□□□□ -2.45
CUL3YGR003W RPS20P38701 121 aaKnown RBP-0.24□□□□□ -2.45
CUL3YGR003W YAR029WP39549 74 aa-0.24□□□□□ -2.45
CUL3YGR003W RPC10P40422 70 aa-0.24□□□□□ -2.45
CUL3YGR003W RUB1Q03919 77 aa-0.24□□□□□ -2.45
CUL3YGR003W YER187WP40102 141 aa-0.25□□□□□ -2.45
CUL3YGR003W LSM6Q06406 86 aaKnown RBP-0.25□□□□□ -2.45
CUL3YGR003W YLR363W-AQ3E747 85 aa-0.25□□□□□ -2.45
CUL3YGR003W YLR361C-AQ3E795 98 aa-0.25□□□□□ -2.45
CUL3YGR003W RIM15P43565 1770 aa-0.25□□□□□ -2.45
CUL3YGR003W BPH1P25356 2167 aa-0.25□□□□□ -2.45
CUL3YGR003W TOP2P06786 1428 aaKnown RBP-0.25□□□□□ -2.45
CUL3YGR003W YIL086CP40503 102 aa-0.25□□□□□ -2.45
CUL3YGR003W PAU15P40585 124 aa-0.25□□□□□ -2.45
CUL3YGR003W YIR021W-AQ3E739 70 aa-0.25□□□□□ -2.45
CUL3YGR003W RPL22BP56628 122 aaKnown RBP-0.26□□□□□ -2.45
CUL3YGR003W SGF11Q03067 99 aa-0.26□□□□□ -2.45
CUL3YGR003W FRQ1Q06389 190 aa-0.26□□□□□ -2.45
CUL3YGR003W YLR099W-AQ3E798 87 aa-0.26□□□□□ -2.45
CUL3YGR003W Q0144Q9ZZW2 109 aa-0.26□□□□□ -2.45
CUL3YGR003W MRP49P32388 137 aa-0.26□□□□□ -2.45
CUL3YGR003W IMP2P46972 177 aa-0.26□□□□□ -2.45
CUL3YGR003W YDR210WQ03482 75 aa-0.26□□□□□ -2.45
CUL3YGR003W YLR042CQ07990 161 aa-0.26□□□□□ -2.45
CUL3YGR003W RPS11AP0CX47 156 aaKnown RBP-0.27□□□□□ -2.45
CUL3YGR003W RPS11BP0CX48 156 aaKnown RBP-0.27□□□□□ -2.45
CUL3YGR003W BUD23P25627 275 aaPredicted RBP-0.27□□□□□ -2.45
CUL3YGR003W DAD1Q12248 94 aa-0.27□□□□□ -2.45
CUL3YGR003W RPO41P13433 1351 aaKnown RBP-0.27□□□□□ -2.45
CUL3YGR003W YJR107C-AP0CT86 78 aa-0.28□□□□□ -2.45
CUL3YGR003W PAU16P35994 123 aa-0.28□□□□□ -2.45
CUL3YGR003W YBR016WP38216 128 aa-0.28□□□□□ -2.45
CUL3YGR003W SLO1Q3E784 85 aa-0.28□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 119.5 ms