RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PGD1YGL025C YET1P35723 206 aa1.29□□□□□ -2.2
PGD1YGL025C LSM2P38203 95 aaKnown RBP1.29□□□□□ -2.2
PGD1YGL025C YPL073CP40323 161 aa1.29□□□□□ -2.2
PGD1YGL025C VMA21P41806 77 aa1.29□□□□□ -2.2
PGD1YGL025C PAM16P42949 149 aa1.29□□□□□ -2.2
PGD1YGL025C LSM3P57743 89 aaKnown RBP1.29□□□□□ -2.2
PGD1YGL025C YMR252CQ04814 134 aa1.29□□□□□ -2.2
PGD1YGL025C PAU23Q07987 124 aa1.29□□□□□ -2.2
PGD1YGL025C DGA1Q08650 418 aa1.29□□□□□ -2.2
PGD1YGL025C FIT3Q08907 204 aa1.29□□□□□ -2.2
PGD1YGL025C PAU17Q12370 124 aa1.29□□□□□ -2.2
PGD1YGL025C RPS25AQ3E792 108 aaPredicted RBP1.29□□□□□ -2.2
PGD1YGL025C MHF1Q3E835 90 aa1.29□□□□□ -2.2
PGD1YGL025C YOR093CQ12275 1648 aa1.29□□□□□ -2.2
PGD1YGL025C FKS3Q04952 1785 aa1.29□□□□□ -2.2
PGD1YGL025C PAI3P01094 68 aa1.28□□□□□ -2.2
PGD1YGL025C INO4P13902 151 aa1.28□□□□□ -2.2
PGD1YGL025C SRP21P32342 167 aa1.28□□□□□ -2.2
PGD1YGL025C YKL102CP34249 101 aa1.28□□□□□ -2.2
PGD1YGL025C YAR029WP39549 74 aa1.28□□□□□ -2.2
PGD1YGL025C YNL217WP40152 326 aa1.28□□□□□ -2.2
PGD1YGL025C FLX1P40464 311 aa1.28□□□□□ -2.2
PGD1YGL025C CWP2P43497 92 aa1.28□□□□□ -2.2
PGD1YGL025C FIP1P45976 327 aa1.28□□□□□ -2.2
PGD1YGL025C GPI2P46961 280 aa1.28□□□□□ -2.2
PGD1YGL025C XPT1P47165 209 aa1.28□□□□□ -2.2
PGD1YGL025C EMC4P53073 190 aa1.28□□□□□ -2.2
PGD1YGL025C YGL193CP53097 103 aa1.28□□□□□ -2.2
PGD1YGL025C GEP7P53171 287 aa1.28□□□□□ -2.2
PGD1YGL025C FIT1Q04433 528 aa1.28□□□□□ -2.2
PGD1YGL025C NMA1Q06178 401 aaKnown RBP1.28□□□□□ -2.2
PGD1YGL025C SHH4Q06236 168 aa1.28□□□□□ -2.2
PGD1YGL025C KEI1Q06346 221 aa1.28□□□□□ -2.2
PGD1YGL025C YDL157CQ12082 118 aa1.28□□□□□ -2.2
PGD1YGL025C YDL180WQ12301 547 aa1.28□□□□□ -2.2
PGD1YGL025C KTI11Q3E840 82 aa1.28□□□□□ -2.2
PGD1YGL025C COA6Q3E846 104 aa1.28□□□□□ -2.2
PGD1YGL025C YFR032C-BQ8TGU2 87 aa1.28□□□□□ -2.2
PGD1YGL025C VMR1P38735 1592 aa1.28□□□□□ -2.2
PGD1YGL025C ECM29P38737 1868 aa1.28□□□□□ -2.2
PGD1YGL025C RIF1P29539 1916 aa1.28□□□□□ -2.2
PGD1YGL025C SLH1P53327 1967 aaKnown RBP1.27□□□□□ -2.21
PGD1YGL025C TIM9O74700 87 aa1.27□□□□□ -2.21
PGD1YGL025C UBC4P15731 148 aa1.27□□□□□ -2.21
PGD1YGL025C YCR085WP25650 117 aa1.27□□□□□ -2.21
PGD1YGL025C RPA12P32529 125 aaKnown RBP1.27□□□□□ -2.21
PGD1YGL025C RPB7P34087 171 aa1.27□□□□□ -2.21
PGD1YGL025C RPL14AP36105 138 aaKnown RBP1.27□□□□□ -2.21
PGD1YGL025C SFT2P38166 215 aa1.27□□□□□ -2.21
PGD1YGL025C YHR138CP38841 114 aaPredicted RBP1.27□□□□□ -2.21
PGD1YGL025C MPC1P53157 130 aaKnown RBP1.27□□□□□ -2.21
PGD1YGL025C THG1P53215 237 aaKnown RBP1.27□□□□□ -2.21
PGD1YGL025C YGR039WP53225 103 aa1.27□□□□□ -2.21
PGD1YGL025C NAT3Q06504 195 aa1.27□□□□□ -2.21
PGD1YGL025C YPR174CQ06616 221 aaPredicted RBP1.27□□□□□ -2.21
PGD1YGL025C YDR029WQ12111 104 aa1.27□□□□□ -2.21
PGD1YGL025C YOR376W-AQ3E805 51 aa1.27□□□□□ -2.21
PGD1YGL025C RRT15Q3E811 62 aa1.27□□□□□ -2.21
PGD1YGL025C URB1P34241 1764 aaKnown RBP1.26□□□□□ -2.21
PGD1YGL025C ECM12O13529 151 aa1.26□□□□□ -2.21
PGD1YGL025C ANB1P19211 157 aa1.26□□□□□ -2.21
PGD1YGL025C UMP1P38293 148 aa1.26□□□□□ -2.21
PGD1YGL025C RPB11P38902 120 aa1.26□□□□□ -2.21
PGD1YGL025C MPM1P40364 252 aa1.26□□□□□ -2.21
PGD1YGL025C YFR035CP43608 114 aa1.26□□□□□ -2.21
PGD1YGL025C YNL033WP53964 284 aa1.26□□□□□ -2.21
PGD1YGL025C YNL019CP53975 284 aa1.26□□□□□ -2.21
PGD1YGL025C FYV12Q08559 129 aa1.26□□□□□ -2.21
PGD1YGL025C ENV10Q99382 181 aa1.26□□□□□ -2.21
PGD1YGL025C RPL22AP05749 121 aaKnown RBP1.25□□□□□ -2.21
PGD1YGL025C YCR050CP25630 102 aa1.25□□□□□ -2.21
PGD1YGL025C MRPL11P36521 249 aaPredicted RBP1.25□□□□□ -2.21
PGD1YGL025C YHL018WP38744 120 aaPredicted RBP1.25□□□□□ -2.21
PGD1YGL025C NSA2P40078 261 aaKnown RBP1.25□□□□□ -2.21
PGD1YGL025C CYB5P40312 120 aa1.25□□□□□ -2.21
PGD1YGL025C MSL1P40567 111 aaPredicted RBP1.25□□□□□ -2.21
PGD1YGL025C PAU15P40585 124 aa1.25□□□□□ -2.21
PGD1YGL025C PHS1P40857 217 aa1.25□□□□□ -2.21
PGD1YGL025C EAF6P47128 113 aa1.25□□□□□ -2.21
PGD1YGL025C YDR274CP87283 123 aa1.25□□□□□ -2.21
PGD1YGL025C YDR042CQ03205 200 aa1.25□□□□□ -2.21
PGD1YGL025C AVO2Q04749 426 aa1.25□□□□□ -2.21
PGD1YGL025C MIC10Q96VH5 97 aa1.25□□□□□ -2.21
PGD1YGL025C MED11Q99278 115 aa1.25□□□□□ -2.21
PGD1YGL025C ODC2Q99297 307 aa1.25□□□□□ -2.21
PGD1YGL025C YBT1P32386 1661 aa1.25□□□□□ -2.21
PGD1YGL025C BUD3P25558 1636 aa1.25□□□□□ -2.21
PGD1YGL025C DNF3Q12674 1656 aa1.24□□□□□ -2.21
PGD1YGL025C LAA1P39526 2014 aa1.24□□□□□ -2.21
PGD1YGL025C PAU19P0CE85 124 aa1.24□□□□□ -2.21
PGD1YGL025C PAU21P0CE86 164 aa1.24□□□□□ -2.21
PGD1YGL025C PAU22P0CE87 164 aa1.24□□□□□ -2.21
PGD1YGL025C YHR213WP0CI67 198 aa1.24□□□□□ -2.21
PGD1YGL025C SPO13P23624 291 aa1.24□□□□□ -2.21
PGD1YGL025C PAU3P25610 124 aa1.24□□□□□ -2.21
PGD1YGL025C AHT1P29589 182 aa1.24□□□□□ -2.21
PGD1YGL025C YRA2P36036 203 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
PGD1YGL025C SKI6P46948 246 aaPredicted RBP1.24□□□□□ -2.21
PGD1YGL025C YNR077CP53758 84 aa1.24□□□□□ -2.21
PGD1YGL025C PGA1P53896 198 aa1.24□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 100.6 ms