RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C YPR174CQ06616 221 aaPredicted RBP1.9□□□□□ -2.11
SSN2YDR443C YEL073CP39974 107 aa1.89□□□□□ -2.11
SSN2YDR443C RPL13BP40212 199 aaKnown RBP1.89□□□□□ -2.11
SSN2YDR443C YFR045WP43617 309 aa1.89□□□□□ -2.11
SSN2YDR443C MPC1P53157 130 aaKnown RBP1.89□□□□□ -2.11
SSN2YDR443C ARO2P28777 376 aaKnown RBP1.89□□□□□ -2.11
SSN2YDR443C YHL042WP38729 150 aa1.89□□□□□ -2.11
SSN2YDR443C YIL059CP40520 121 aa1.89□□□□□ -2.11
SSN2YDR443C FIT3Q08907 204 aa1.89□□□□□ -2.11
SSN2YDR443C YKR032WP36127 104 aa1.89□□□□□ -2.11
SSN2YDR443C YLR281CQ05863 155 aa1.89□□□□□ -2.11
SSN2YDR443C MIC10Q96VH5 97 aa1.89□□□□□ -2.11
SSN2YDR443C YOL162WP0CF19 215 aa1.88□□□□□ -2.11
SSN2YDR443C YJL027CP47063 138 aaPredicted RBP1.88□□□□□ -2.11
SSN2YDR443C ERG25P53045 309 aa1.88□□□□□ -2.11
SSN2YDR443C PIR1Q03178 341 aa1.88□□□□□ -2.11
SSN2YDR443C SOM1Q05676 74 aa1.88□□□□□ -2.11
SSN2YDR443C YDL241WQ07738 123 aa1.88□□□□□ -2.11
SSN2YDR443C TMA19P35691 167 aaKnown RBP1.88□□□□□ -2.11
SSN2YDR443C HYR1P40581 163 aaKnown RBP1.88□□□□□ -2.11
SSN2YDR443C QCR10P37299 77 aa1.88□□□□□ -2.11
SSN2YDR443C SMD3P43321 101 aaKnown RBP1.88□□□□□ -2.11
SSN2YDR443C MRPS16Q02608 121 aa1.88□□□□□ -2.11
SSN2YDR443C UPS3Q04006 179 aa1.88□□□□□ -2.11
SSN2YDR443C KRE9P39005 276 aa1.87□□□□□ -2.11
SSN2YDR443C ERV14P53173 138 aa1.87□□□□□ -2.11
SSN2YDR443C YPL067CQ02754 198 aa1.87□□□□□ -2.11
SSN2YDR443C YOS1Q3E834 85 aa1.87□□□□□ -2.11
SSN2YDR443C HMRA1P0CY11 126 aa1.87□□□□□ -2.11
SSN2YDR443C MRPL27P36526 146 aaPredicted RBP1.87□□□□□ -2.11
SSN2YDR443C RAF1Q06891 181 aa1.87□□□□□ -2.11
SSN2YDR443C YLR365WQ7LIF2 110 aa1.87□□□□□ -2.11
SSN2YDR443C YGR026WP53217 278 aa1.87□□□□□ -2.11
SSN2YDR443C MIX14Q04341 121 aa1.87□□□□□ -2.11
SSN2YDR443C TMC1Q08422 150 aaPredicted RBP1.87□□□□□ -2.11
SSN2YDR443C FYV5P25585 152 aa1.86□□□□□ -2.11
SSN2YDR443C SRB6P32570 121 aa1.86□□□□□ -2.11
SSN2YDR443C MID2P36027 376 aa1.86□□□□□ -2.11
SSN2YDR443C YPR195CQ06594 109 aa1.86□□□□□ -2.11
SSN2YDR443C ATG10Q07879 167 aa1.86□□□□□ -2.11
SSN2YDR443C YKL044WP36092 106 aa1.86□□□□□ -2.11
SSN2YDR443C UTH1P36135 365 aa1.86□□□□□ -2.11
SSN2YDR443C YOL085CQ99345 113 aa1.86□□□□□ -2.11
SSN2YDR443C ASK1P35734 292 aa1.86□□□□□ -2.11
SSN2YDR443C PEP8P40335 379 aa1.86□□□□□ -2.11
SSN2YDR443C IGO1P53897 168 aa1.86□□□□□ -2.11
SSN2YDR443C GPI11Q06636 219 aa1.86□□□□□ -2.11
SSN2YDR443C IRA1P18963 3092 aa1.86□□□□□ -2.11
SSN2YDR443C REE1P40893 198 aa1.86□□□□□ -2.11
SSN2YDR443C SCS22Q6Q595 175 aa1.86□□□□□ -2.11
SSN2YDR443C PPT2Q12036 173 aa1.85□□□□□ -2.11
SSN2YDR443C YOR381W-AQ3E804 55 aa1.85□□□□□ -2.11
SSN2YDR443C MRPL44P19956 98 aa1.85□□□□□ -2.11
SSN2YDR443C YHR180WP38868 163 aa1.85□□□□□ -2.11
SSN2YDR443C IRC19Q07843 230 aa1.85□□□□□ -2.11
SSN2YDR443C YDR029WQ12111 104 aa1.85□□□□□ -2.11
SSN2YDR443C YMR175W-AQ3E766 64 aa1.85□□□□□ -2.11
SSN2YDR443C YER187WP40102 141 aa1.84□□□□□ -2.11
SSN2YDR443C HUR1P45820 110 aa1.84□□□□□ -2.11
SSN2YDR443C HRT1Q08273 121 aa1.84□□□□□ -2.11
SSN2YDR443C YKR045CP36138 183 aa1.84□□□□□ -2.11
SSN2YDR443C ATG41Q12048 136 aa1.84□□□□□ -2.11
SSN2YDR443C YPR013CQ12145 317 aa1.84□□□□□ -2.11
SSN2YDR443C SNF11P38956 169 aa1.84□□□□□ -2.12
SSN2YDR443C MDM35O60200 86 aa1.83□□□□□ -2.12
SSN2YDR443C BRP1P53194 125 aa1.83□□□□□ -2.12
SSN2YDR443C THG1P53215 237 aaKnown RBP1.83□□□□□ -2.12
SSN2YDR443C ATP19P81451 68 aa1.83□□□□□ -2.12
SSN2YDR443C YOR268CQ08734 132 aa1.83□□□□□ -2.12
SSN2YDR443C MIG1P27705 504 aa1.83□□□□□ -2.12
SSN2YDR443C YBR013CP38215 129 aa1.83□□□□□ -2.12
SSN2YDR443C SVP26P38869 228 aa1.83□□□□□ -2.12
SSN2YDR443C RRT15Q3E811 62 aa1.83□□□□□ -2.12
SSN2YDR443C ATG40Q99325 256 aa1.83□□□□□ -2.12
SSN2YDR443C SRX1P36077 127 aa1.83□□□□□ -2.12
SSN2YDR443C MRPL11P36521 249 aaPredicted RBP1.83□□□□□ -2.12
SSN2YDR443C GPI19Q04082 140 aa1.83□□□□□ -2.12
SSN2YDR443C ELP6Q04868 273 aa1.83□□□□□ -2.12
SSN2YDR443C YPR153WQ06537 140 aa1.83□□□□□ -2.12
SSN2YDR443C SOD1P00445 154 aaKnown RBP1.83□□□□□ -2.12
SSN2YDR443C CIS3P47001 227 aa1.83□□□□□ -2.12
SSN2YDR443C ECM12O13529 151 aa1.82□□□□□ -2.12
SSN2YDR443C YJL197C-AP0C5P0 93 aa1.82□□□□□ -2.12
SSN2YDR443C YGL010WP25338 174 aa1.82□□□□□ -2.12
SSN2YDR443C YIR020CP40575 100 aa1.82□□□□□ -2.12
SSN2YDR443C SEN15Q04675 128 aa1.82□□□□□ -2.12
SSN2YDR443C COA4Q05809 96 aa1.82□□□□□ -2.12
SSN2YDR443C PAU21P0CE86 164 aa1.82□□□□□ -2.12
SSN2YDR443C PAU22P0CE87 164 aa1.82□□□□□ -2.12
SSN2YDR443C FMT1P32785 401 aa1.82□□□□□ -2.12
SSN2YDR443C POC4Q12245 148 aaPredicted RBP1.82□□□□□ -2.12
SSN2YDR443C YHL018WP38744 120 aaPredicted RBP1.82□□□□□ -2.12
SSN2YDR443C RPL33BP41056 107 aaKnown RBP1.82□□□□□ -2.12
SSN2YDR443C YDR042CQ03205 200 aa1.82□□□□□ -2.12
SSN2YDR443C YOR015WQ12169 119 aa1.82□□□□□ -2.12
SSN2YDR443C YLR236CA0A023PZG4 107 aa1.81□□□□□ -2.12
SSN2YDR443C YHR213WP0CI67 198 aa1.81□□□□□ -2.12
SSN2YDR443C STF2P16965 84 aa1.81□□□□□ -2.12
SSN2YDR443C MSL1P40567 111 aaPredicted RBP1.81□□□□□ -2.12
SSN2YDR443C RSM19P53733 91 aaPredicted RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms