RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W YER137CP40083 148 aaKnown RBP2.58□□□□□ -2
RRP17YDR412W YIL059CP40520 121 aa2.58□□□□□ -2
RRP17YDR412W SKI6P46948 246 aaPredicted RBP2.58□□□□□ -2
RRP17YDR412W ERG25P53045 309 aa2.58□□□□□ -2
RRP17YDR412W YGL088WP53151 121 aa2.58□□□□□ -2
RRP17YDR412W YDR274CP87283 123 aa2.58□□□□□ -2
RRP17YDR412W SMD1Q02260 146 aaPredicted RBP2.58□□□□□ -2
RRP17YDR412W EST3Q03096 181 aa2.58□□□□□ -2
RRP17YDR412W FCF1Q05498 189 aaPredicted RBP2.58□□□□□ -2
RRP17YDR412W YOL014WQ08110 124 aa2.58□□□□□ -2
RRP17YDR412W FEX1Q08913 375 aa2.58□□□□□ -2
RRP17YDR412W YPR013CQ12145 317 aa2.58□□□□□ -2
RRP17YDR412W YGL258W-AQ3E740 77 aa2.58□□□□□ -2
RRP17YDR412W ADH3P07246 375 aaKnown RBP2.57□□□□□ -2
RRP17YDR412W ATP15P21306 62 aa2.57□□□□□ -2
RRP17YDR412W ERV15P38312 142 aa2.57□□□□□ -2
RRP17YDR412W YHR125WP38831 101 aa2.57□□□□□ -2
RRP17YDR412W NSA2P40078 261 aaKnown RBP2.57□□□□□ -2
RRP17YDR412W CIN5P40917 295 aa2.57□□□□□ -2
RRP17YDR412W OST2P46964 130 aa2.57□□□□□ -2
RRP17YDR412W TDA4P47153 279 aa2.57□□□□□ -2
RRP17YDR412W VPS28Q02767 242 aa2.57□□□□□ -2
RRP17YDR412W YOR385WQ08909 290 aa2.57□□□□□ -2
RRP17YDR412W TAR1Q8TGM6 124 aa2.57□□□□□ -2
RRP17YDR412W NHP6AP11632 93 aaKnown RBP2.56□□□□□ -2
RRP17YDR412W YJL144WP47009 104 aa2.56□□□□□ -2
RRP17YDR412W RDS3Q06835 107 aaPredicted RBP2.56□□□□□ -2
RRP17YDR412W YOR011W-AQ3E807 68 aa2.56□□□□□ -2
RRP17YDR412W SPS2P08459 502 aa2.55□□□□□ -2
RRP17YDR412W SPT14P32363 452 aa2.55□□□□□ -2
RRP17YDR412W UTP11P34247 250 aaPredicted RBP2.55□□□□□ -2
RRP17YDR412W RRT1P38192 103 aa2.55□□□□□ -2
RRP17YDR412W YFR045WP43617 309 aa2.55□□□□□ -2
RRP17YDR412W SNX4P47057 423 aa2.55□□□□□ -2
RRP17YDR412W YGR025WP53216 100 aa2.55□□□□□ -2
RRP17YDR412W UBC7Q02159 165 aa2.55□□□□□ -2
RRP17YDR412W NAT3Q06504 195 aa2.55□□□□□ -2
RRP17YDR412W RAD28Q12021 506 aa2.55□□□□□ -2
RRP17YDR412W YML100W-AQ8TGT0 57 aa2.55□□□□□ -2
RRP17YDR412W SRL3P36167 246 aa2.54□□□□□ -2
RRP17YDR412W YBL071CP38185 102 aa2.54□□□□□ -2
RRP17YDR412W ARC15P40518 154 aaRIP-Chip data2.54□□□□□ -2not detected
RRP17YDR412W YFL019CP43576 117 aa2.54□□□□□ -2
RRP17YDR412W POC4Q12245 148 aaPredicted RBP2.54□□□□□ -2
RRP17YDR412W RPS25BP0C0T4 108 aaKnown RBP2.53□□□□□ -2
RRP17YDR412W YHR032W-AP0C5N6 59 aa2.53□□□□□ -2
RRP17YDR412W MRP17P28778 131 aa2.53□□□□□ -2
RRP17YDR412W SNF11P38956 169 aa2.53□□□□□ -2
RRP17YDR412W POR2P40478 281 aa2.53□□□□□ -2
RRP17YDR412W COX12Q01519 83 aa2.53□□□□□ -2
RRP17YDR412W YMR090WQ04304 227 aaKnown RBP2.53□□□□□ -2
RRP17YDR412W RRT7Q07829 113 aa2.53□□□□□ -2
RRP17YDR412W RPS25AQ3E792 108 aaPredicted RBP2.53□□□□□ -2
RRP17YDR412W YHR213WP0CI67 198 aa2.52□□□□□ -2.01
RRP17YDR412W VTC1P40046 129 aaRIP-Chip data2.52□□□□□ -2.01not detected
RRP17YDR412W YER135CP40082 130 aa2.52□□□□□ -2.01
RRP17YDR412W YPL073CP40323 161 aa2.52□□□□□ -2.01
RRP17YDR412W SMD3P43321 101 aaKnown RBP2.52□□□□□ -2.01
RRP17YDR412W GPI2P46961 280 aa2.52□□□□□ -2.01
RRP17YDR412W COF1Q03048 143 aaKnown RBP2.52□□□□□ -2.01
RRP17YDR412W FRQ1Q06389 190 aa2.52□□□□□ -2.01
RRP17YDR412W FYV12Q08559 129 aa2.52□□□□□ -2.01
RRP17YDR412W YOR268CQ08734 132 aa2.52□□□□□ -2.01
RRP17YDR412W YLR412C-AQ3E742 68 aa2.52□□□□□ -2.01
RRP17YDR412W COA2Q3E823 68 aa2.52□□□□□ -2.01
RRP17YDR412W SHB17P36136 271 aaKnown RBP2.51□□□□□ -2.01
RRP17YDR412W YBR242WP38331 238 aa2.51□□□□□ -2.01
RRP17YDR412W YNL200CP40165 246 aaKnown RBP2.51□□□□□ -2.01
RRP17YDR412W GLC8P41818 229 aa2.51□□□□□ -2.01
RRP17YDR412W YJL027CP47063 138 aaPredicted RBP2.51□□□□□ -2.01
RRP17YDR412W YLR146W-AQ2V2P1 62 aa2.51□□□□□ -2.01
RRP17YDR412W WIP1Q2V2P8 89 aa2.51□□□□□ -2.01
RRP17YDR412W YAR023CD6VPM8 179 aa2.5□□□□□ -2.01
RRP17YDR412W YCR001WP25347 104 aa2.5□□□□□ -2.01
RRP17YDR412W YER134CP40081 178 aa2.5□□□□□ -2.01
RRP17YDR412W RPL13BP40212 199 aaKnown RBP2.5□□□□□ -2.01
RRP17YDR412W YFR035CP43608 114 aa2.5□□□□□ -2.01
RRP17YDR412W DSK2P48510 373 aa2.5□□□□□ -2.01
RRP17YDR412W SDH7Q04401 133 aa2.5□□□□□ -2.01
RRP17YDR412W SHH3Q04487 196 aa2.5□□□□□ -2.01
RRP17YDR412W RPL13AQ12690 199 aaPredicted RBP2.5□□□□□ -2.01
RRP17YDR412W ATP5P09457 212 aa2.49□□□□□ -2.01
RRP17YDR412W FPR2P32472 135 aa2.49□□□□□ -2.01
RRP17YDR412W SFT2P38166 215 aa2.49□□□□□ -2.01
RRP17YDR412W FYV4P38783 130 aaPredicted RBP2.49□□□□□ -2.01
RRP17YDR412W YEA6P39953 335 aa2.49□□□□□ -2.01
RRP17YDR412W YGR026WP53217 278 aa2.49□□□□□ -2.01
RRP17YDR412W YKR032WP36127 104 aa2.48□□□□□ -2.01
RRP17YDR412W LSM2P38203 95 aaKnown RBP2.48□□□□□ -2.01
RRP17YDR412W YER181CP40097 107 aa2.48□□□□□ -2.01
RRP17YDR412W HUA1P40325 198 aa2.48□□□□□ -2.01
RRP17YDR412W YGR269WP40326 108 aa2.48□□□□□ -2.01
RRP17YDR412W MIC27P50945 234 aa2.48□□□□□ -2.01
RRP17YDR412W YDR366CP87287 132 aa2.48□□□□□ -2.01
RRP17YDR412W SLO1Q3E784 85 aa2.48□□□□□ -2.01
RRP17YDR412W YNL146C-AQ3E7Z1 64 aa2.48□□□□□ -2.01
RRP17YDR412W YHR213W-AQ8TGT4 77 aa2.48□□□□□ -2.01
RRP17YDR412W POR1P04840 283 aaKnown RBP2.47□□□□□ -2.01
RRP17YDR412W DDI2P0CH63 225 aa2.47□□□□□ -2.01
RRP17YDR412W DDI3P0CH64 225 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms