RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W YER145C-AA0A023PYF4 145 aa9.53□□□□□ -0.88
PTP1YDL230W PRE1P22141 198 aaKnown RBP9.53□□□□□ -0.88
PTP1YDL230W VMA16P23968 213 aa9.53□□□□□ -0.88
PTP1YDL230W YHR022CP38763 256 aa9.53□□□□□ -0.88
PTP1YDL230W YIP3P53633 176 aa9.53□□□□□ -0.88
PTP1YDL230W GRH1Q04410 372 aaKnown RBP9.53□□□□□ -0.88
PTP1YDL230W IZH3Q07959 543 aa9.53□□□□□ -0.88
PTP1YDL230W MRPL49P40858 161 aaPredicted RBP9.52□□□□□ -0.89
PTP1YDL230W DUO1P53168 247 aaKnown RBP9.52□□□□□ -0.89
PTP1YDL230W PAU23Q07987 124 aa9.52□□□□□ -0.89
PTP1YDL230W PAU17Q12370 124 aa9.52□□□□□ -0.89
PTP1YDL230W AGA1P32323 725 aa9.51□□□□□ -0.89
PTP1YDL230W COX16P47081 118 aa9.51□□□□□ -0.89
PTP1YDL230W HTL1Q9URQ5 78 aa9.51□□□□□ -0.89
PTP1YDL230W YCR023CP25351 611 aa9.5□□□□□ -0.89
PTP1YDL230W YCR007CP25354 239 aa9.5□□□□□ -0.89
PTP1YDL230W UTR5P32630 166 aa9.5□□□□□ -0.89
PTP1YDL230W YER076CP40049 302 aa9.5□□□□□ -0.89
PTP1YDL230W YDR042CQ03205 200 aa9.5□□□□□ -0.89
PTP1YDL230W VPS71Q03433 280 aa9.5□□□□□ -0.89
PTP1YDL230W YLR050CQ12155 161 aaKnown RBP9.5□□□□□ -0.89
PTP1YDL230W YER135CP40082 130 aa9.49□□□□□ -0.89
PTP1YDL230W SIM1P40472 476 aa9.49□□□□□ -0.89
PTP1YDL230W FIP1P45976 327 aa9.49□□□□□ -0.89
PTP1YDL230W ATP23P53722 227 aa9.49□□□□□ -0.89
PTP1YDL230W YNL146C-AQ3E7Z1 64 aa9.49□□□□□ -0.89
PTP1YDL230W MGR2Q02889 113 aa9.48□□□□□ -0.89
PTP1YDL230W CCW12Q12127 133 aa9.48□□□□□ -0.89
PTP1YDL230W SAL1D6W196 494 aa9.47□□□□□ -0.89
PTP1YDL230W RPL31AP0C2H8 113 aaKnown RBP9.47□□□□□ -0.89
PTP1YDL230W AQY1P0CD91 305 aa9.47□□□□□ -0.89
PTP1YDL230W HAP3P13434 144 aa9.47□□□□□ -0.89
PTP1YDL230W BET5Q03630 159 aa9.47□□□□□ -0.89
PTP1YDL230W RPL27BP0C2H7 136 aaKnown RBP9.46□□□□□ -0.9
PTP1YDL230W KTI12P34253 313 aaKnown RBP9.46□□□□□ -0.9
PTP1YDL230W PFY1P07274 126 aa9.45□□□□□ -0.9
PTP1YDL230W PCL2P25693 308 aa9.45□□□□□ -0.9
PTP1YDL230W APS1P35181 156 aa9.45□□□□□ -0.9
PTP1YDL230W TVP18Q04767 167 aa9.45□□□□□ -0.9
PTP1YDL230W RRG8Q06109 277 aa9.45□□□□□ -0.9
PTP1YDL230W MRPL23Q12487 163 aaPredicted RBP9.45□□□□□ -0.9
PTP1YDL230W YBR200W-AQ3E755 54 aa9.45□□□□□ -0.9
PTP1YDL230W TAR1Q8TGM6 124 aa9.45□□□□□ -0.9
PTP1YDL230W UIP3P39547 235 aa9.44□□□□□ -0.9
PTP1YDL230W FCF1Q05498 189 aaPredicted RBP9.44□□□□□ -0.9
PTP1YDL230W PRM3Q08931 133 aa9.44□□□□□ -0.9
PTP1YDL230W VAR1P02381 398 aa9.43□□□□□ -0.9
PTP1YDL230W YKR070WP36151 352 aaKnown RBP9.43□□□□□ -0.9
PTP1YDL230W MIG3P39943 394 aa9.43□□□□□ -0.9
PTP1YDL230W YMR244WQ04018 355 aa9.43□□□□□ -0.9
PTP1YDL230W YMR103CQ04436 120 aa9.43□□□□□ -0.9
PTP1YDL230W YPR053CQ6Q5F3 151 aa9.43□□□□□ -0.9
PTP1YDL230W KEG1P43614 200 aa9.42□□□□□ -0.9
PTP1YDL230W DGA1Q08650 418 aa9.42□□□□□ -0.9
PTP1YDL230W YLR112WQ12130 139 aa9.42□□□□□ -0.9
PTP1YDL230W RPL15AP05748 204 aaKnown RBP9.4□□□□□ -0.9
PTP1YDL230W HMRA2P0CY13 119 aa9.4□□□□□ -0.9
PTP1YDL230W YFR035CP43608 114 aa9.4□□□□□ -0.9
PTP1YDL230W GLO1P50107 326 aa9.4□□□□□ -0.9
PTP1YDL230W YDR366CP87287 132 aa9.4□□□□□ -0.9
PTP1YDL230W DFM1Q12743 341 aaKnown RBP9.4□□□□□ -0.9
PTP1YDL230W TMA7Q3E764 64 aaKnown RBP9.4□□□□□ -0.9
PTP1YDL230W CCW14O13547 238 aa9.39□□□□□ -0.91
PTP1YDL230W Q0255P03881 472 aa9.39□□□□□ -0.91
PTP1YDL230W CWC27Q02770 301 aa9.39□□□□□ -0.91
PTP1YDL230W RPL42AP0CX27 106 aaKnown RBP9.38□□□□□ -0.91
PTP1YDL230W RPL42BP0CX28 106 aaKnown RBP9.38□□□□□ -0.91
PTP1YDL230W RPL16BP26785 198 aaKnown RBP9.38□□□□□ -0.91
PTP1YDL230W MRPS8Q03799 155 aa9.38□□□□□ -0.91
PTP1YDL230W TOS6P48560 102 aa9.37□□□□□ -0.91
PTP1YDL230W MIC26P50087 233 aa9.37□□□□□ -0.91
PTP1YDL230W COA3Q3E7B2 85 aa9.37□□□□□ -0.91
PTP1YDL230W YHR212W-AP0CX91 67 aa9.35□□□□□ -0.91
PTP1YDL230W YKL044WP36092 106 aa9.35□□□□□ -0.91
PTP1YDL230W DCV1P43595 202 aa9.34□□□□□ -0.91
PTP1YDL230W YLR363W-AQ3E747 85 aa9.34□□□□□ -0.91
PTP1YDL230W YCL042WP25572 119 aa9.33□□□□□ -0.92
PTP1YDL230W ELF1P36053 145 aa9.33□□□□□ -0.92
PTP1YDL230W YKL070WP36087 169 aa9.33□□□□□ -0.92
PTP1YDL230W PRY2P36110 329 aa9.32□□□□□ -0.92
PTP1YDL230W ECM33P38248 429 aaKnown RBP9.32□□□□□ -0.92
PTP1YDL230W YPL073CP40323 161 aa9.32□□□□□ -0.92
PTP1YDL230W YLR042CQ07990 161 aa9.32□□□□□ -0.92
PTP1YDL230W YPL261CQ08976 102 aa9.32□□□□□ -0.92
PTP1YDL230W YPR170W-BP0C5R9 85 aa9.31□□□□□ -0.92
PTP1YDL230W RRT13P40042 185 aa9.31□□□□□ -0.92
PTP1YDL230W YDL186WP48568 277 aa9.31□□□□□ -0.92
PTP1YDL230W ALG13P53178 202 aa9.31□□□□□ -0.92
PTP1YDL230W YOR008C-AQ3E7B9 74 aa9.31□□□□□ -0.92
PTP1YDL230W YDL022C-AP0C5L6 82 aa9.3□□□□□ -0.92
PTP1YDL230W AIM34Q03673 198 aa9.3□□□□□ -0.92
PTP1YDL230W VHS2P40463 436 aa9.29□□□□□ -0.92
PTP1YDL230W MBF1O14467 151 aaKnown RBP9.28□□□□□ -0.92
PTP1YDL230W YEL067CP39978 195 aa9.28□□□□□ -0.92
PTP1YDL230W MRP49P32388 137 aa9.27□□□□□ -0.93
PTP1YDL230W RPF1P38805 295 aaKnown RBP9.27□□□□□ -0.93
PTP1YDL230W RPL16AP26784 199 aaKnown RBP9.26□□□□□ -0.93
PTP1YDL230W URM1P40554 99 aaPredicted RBP9.26□□□□□ -0.93
PTP1YDL230W YJR146WP47174 117 aa9.26□□□□□ -0.93
PTP1YDL230W NUP42P49686 430 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms