RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W COX19Q3E731 98 aa1.11□□□□□ -2.23
TRM3YDL112W YLR307C-AQ3E825 87 aa1.11□□□□□ -2.23
TRM3YDL112W PMP3P87284 55 aa1.1□□□□□ -2.23
TRM3YDL112W SPO13P23624 291 aa1.1□□□□□ -2.23
TRM3YDL112W SUR2P38992 349 aa1.1□□□□□ -2.23
TRM3YDL112W GCV3P39726 170 aaPredicted RBP1.1□□□□□ -2.23
TRM3YDL112W RPC10P40422 70 aa1.1□□□□□ -2.23
TRM3YDL112W PCC1Q3E833 88 aa1.1□□□□□ -2.23
TRM3YDL112W YDR034C-AP0C289 58 aa1.1□□□□□ -2.23
TRM3YDL112W CDC50P25656 391 aa1.1□□□□□ -2.23
TRM3YDL112W PAU4P53427 120 aa1.1□□□□□ -2.23
TRM3YDL112W DAD1Q12248 94 aa1.1□□□□□ -2.23
TRM3YDL112W GCN3P14741 305 aa1.09□□□□□ -2.23
TRM3YDL112W RPL16AP26784 199 aaKnown RBP1.09□□□□□ -2.23
TRM3YDL112W TRS20P38334 175 aa1.09□□□□□ -2.23
TRM3YDL112W RAV2Q03956 351 aa1.09□□□□□ -2.23
TRM3YDL112W YMR320WQ04897 101 aa1.09□□□□□ -2.23
TRM3YDL112W ARC18Q05933 178 aaKnown RBP1.09□□□□□ -2.23
TRM3YDL112W YDL241WQ07738 123 aa1.09□□□□□ -2.23
TRM3YDL112W DAD4P69851 72 aa1.09□□□□□ -2.23
TRM3YDL112W YOR105WQ08504 108 aa1.09□□□□□ -2.23
TRM3YDL112W DGA1Q08650 418 aa1.09□□□□□ -2.23
TRM3YDL112W ADH2P00331 348 aaKnown RBP1.09□□□□□ -2.24
TRM3YDL112W YIL059CP40520 121 aa1.09□□□□□ -2.24
TRM3YDL112W GPI19Q04082 140 aa1.09□□□□□ -2.24
TRM3YDL112W FCF2Q12035 217 aaPredicted RBP1.09□□□□□ -2.24
TRM3YDL112W YOL085CQ99345 113 aa1.09□□□□□ -2.24
TRM3YDL112W PAU1P0CE88 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU14P0CE89 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU6P0CE90 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU18P0CE91 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU8P0CE92 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU11P0CE93 120 aa1.08□□□□□ -2.24
TRM3YDL112W HMRA1P0CY11 126 aa1.08□□□□□ -2.24
TRM3YDL112W PAU13P38725 120 aa1.08□□□□□ -2.24
TRM3YDL112W ARC15P40518 154 aaRIP-Chip data1.08□□□□□ -2.24not detected
TRM3YDL112W YFR045WP43617 309 aa1.08□□□□□ -2.24
TRM3YDL112W PAU10Q03050 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU20Q08322 120 aa1.08□□□□□ -2.24
TRM3YDL112W PAU9Q3E770 120 aa1.08□□□□□ -2.24
TRM3YDL112W ARO2P28777 376 aaKnown RBP1.08□□□□□ -2.24
TRM3YDL112W QRI5P32344 111 aa1.08□□□□□ -2.24
TRM3YDL112W YER076CP40049 302 aa1.08□□□□□ -2.24
TRM3YDL112W PHS1P40857 217 aa1.08□□□□□ -2.24
TRM3YDL112W DIA1P54005 336 aa1.08□□□□□ -2.24
TRM3YDL112W YMR175W-AQ3E766 64 aa1.08□□□□□ -2.24
TRM3YDL112W YER078W-AQ3E7A2 54 aa1.08□□□□□ -2.24
TRM3YDL112W RPL27AP0C2H6 136 aaKnown RBP1.08□□□□□ -2.24
TRM3YDL112W YEL045CP32616 141 aa1.08□□□□□ -2.24
TRM3YDL112W RPL14AP36105 138 aaKnown RBP1.08□□□□□ -2.24
TRM3YDL112W RPL14BP38754 138 aaKnown RBP1.08□□□□□ -2.24
TRM3YDL112W YHR140WP38842 239 aa1.08□□□□□ -2.24
TRM3YDL112W EOS1P53938 366 aa1.08□□□□□ -2.24
TRM3YDL112W YBR298C-AQ8TGK4 73 aa1.08□□□□□ -2.24
TRM3YDL112W YMR141CP40211 102 aa1.08□□□□□ -2.24
TRM3YDL112W YJR111CP47148 283 aaKnown RBP1.08□□□□□ -2.24
TRM3YDL112W GIM5Q04493 163 aa1.08□□□□□ -2.24
TRM3YDL112W YDR029WQ12111 104 aa1.08□□□□□ -2.24
TRM3YDL112W MRPL31P14063 131 aaPredicted RBP1.07□□□□□ -2.24
TRM3YDL112W YBL112CQ3E7Y4 105 aa1.07□□□□□ -2.24
TRM3YDL112W ENV10Q99382 181 aa1.07□□□□□ -2.24
TRM3YDL112W MAG1P22134 296 aaKnown RBP1.07□□□□□ -2.24
TRM3YDL112W SRP14P38985 146 aa1.07□□□□□ -2.24
TRM3YDL112W TAD2P47058 250 aa1.07□□□□□ -2.24
TRM3YDL112W OST3P48439 350 aa1.07□□□□□ -2.24
TRM3YDL112W YAR023CD6VPM8 179 aa1.07□□□□□ -2.24
TRM3YDL112W PAU7P39545 55 aa1.07□□□□□ -2.24
TRM3YDL112W PAU5P43575 122 aa1.07□□□□□ -2.24
TRM3YDL112W YLR118CQ12354 227 aa1.07□□□□□ -2.24
TRM3YDL112W YJL197C-AP0C5P0 93 aa1.06□□□□□ -2.24
TRM3YDL112W CIN5P40917 295 aa1.06□□□□□ -2.24
TRM3YDL112W SDS23P53172 527 aa1.06□□□□□ -2.24
TRM3YDL112W ADD37Q03233 198 aa1.06□□□□□ -2.24
TRM3YDL112W YGL041C-BQ3E750 60 aa1.06□□□□□ -2.24
TRM3YDL112W PEX22P39718 180 aa1.06□□□□□ -2.24
TRM3YDL112W AIM19P40502 157 aa1.06□□□□□ -2.24
TRM3YDL112W MGR2Q02889 113 aa1.06□□□□□ -2.24
TRM3YDL112W NAT3Q06504 195 aa1.06□□□□□ -2.24
TRM3YDL112W FZF1P32805 299 aa1.06□□□□□ -2.24
TRM3YDL112W UBC12P52491 188 aa1.06□□□□□ -2.24
TRM3YDL112W ECM12O13529 151 aa1.06□□□□□ -2.24
TRM3YDL112W PFY1P07274 126 aa1.06□□□□□ -2.24
TRM3YDL112W LDS1P31379 325 aa1.06□□□□□ -2.24
TRM3YDL112W MRPS9P38120 278 aa1.06□□□□□ -2.24
TRM3YDL112W HSP10P38910 106 aa1.06□□□□□ -2.24
TRM3YDL112W SEC72P39742 193 aaKnown RBP1.06□□□□□ -2.24
TRM3YDL112W PGD1P40356 397 aa1.06□□□□□ -2.24
TRM3YDL112W IGD1P43598 195 aa1.06□□□□□ -2.24
TRM3YDL112W TOS6P48560 102 aa1.06□□□□□ -2.24
TRM3YDL112W POM33Q12164 279 aa1.06□□□□□ -2.24
TRM3YDL112W YOR015WQ12169 119 aa1.06□□□□□ -2.24
TRM3YDL112W SME1Q12330 94 aaPredicted RBP1.06□□□□□ -2.24
TRM3YDL112W SNU23Q12368 194 aaPredicted RBP1.06□□□□□ -2.24
TRM3YDL112W YOP1Q12402 180 aa1.06□□□□□ -2.24
TRM3YDL112W YKR070WP36151 352 aaKnown RBP1.05□□□□□ -2.24
TRM3YDL112W DCV1P43595 202 aa1.05□□□□□ -2.24
TRM3YDL112W MMS2P53152 137 aa1.05□□□□□ -2.24
TRM3YDL112W SAR1P20606 190 aaKnown RBP1.05□□□□□ -2.24
TRM3YDL112W SVP26P38869 228 aa1.05□□□□□ -2.24
TRM3YDL112W VTC1P40046 129 aaRIP-Chip data1.05□□□□□ -2.24not detected
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms