RNA–Protein interactions for RNA: YCL014W

BUD3, Transcript of Protein involved in bud-site selection, yeast

Gene BUD3, Length 4,911 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD3	YCL014W	YML018C	Q03730	393 aa		0.72	□□□□□ -2.29
BUD3	YCL014W	DCP1	Q12517	231 aa	Predicted RBP	0.72	□□□□□ -2.29
BUD3	YCL014W	YIL134C-A	Q45U18	67 aa		0.72	□□□□□ -2.29
BUD3	YCL014W	GCV3	P39726	170 aa	Predicted RBP	0.71	□□□□□ -2.3
BUD3	YCL014W	CWP2	P43497	92 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	MRX9	Q07349	420 aa	Known RBP	0.71	□□□□□ -2.3
BUD3	YCL014W	YDL012C	Q12489	107 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	HTB1	P02293	131 aa	Known RBP	0.71	□□□□□ -2.3
BUD3	YCL014W	GSP2	P32836	220 aa	Known RBP	0.71	□□□□□ -2.3
BUD3	YCL014W	CPR5	P35176	225 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	PAU24	P38155	120 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	POP8	P38208	133 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	HHY1	P39982	102 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	AGE2	P40529	298 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	NUP49	Q02199	472 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YLR179C	Q06252	201 aa	Known RBP	0.71	□□□□□ -2.3
BUD3	YCL014W	YPR195C	Q06594	109 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YLR031W	Q07978	186 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YLR053C	Q12026	108 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	UMP1	P38293	148 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YIL059C	P40520	121 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YIR020C	P40575	100 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	TIM13	P53299	105 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YGR219W	P53307	113 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	PBP4	Q07362	185 aa	Known RBP	0.71	□□□□□ -2.3
BUD3	YCL014W	YMR175W-A	Q3E766	64 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	ATP6	P00854	259 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	SRB6	P32570	121 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	SPL2	P38839	148 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	IRC21	Q04772	201 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YDR010C	Q12426	110 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	FMP16	Q12497	93 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YIL156W-B	Q2V2P4	73 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	YOR020W-A	Q3E824	90 aa		0.71	□□□□□ -2.3
BUD3	YCL014W	SPS100	P13130	326 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YGR168C	P53293	376 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YNL122C	P53921	115 aa	Predicted RBP	0.7	□□□□□ -2.3
BUD3	YCL014W	RNH203	Q12338	110 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	ILV1	P00927	576 aa	Known RBP	0.7	□□□□□ -2.3
BUD3	YCL014W	RFA3	P26755	122 aa	Known RBP	0.7	□□□□□ -2.3
BUD3	YCL014W	AIM2	P39721	246 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YER187W	P40102	141 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YNL194C	P40169	301 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	ARC15	P40518	154 aa	RIP-Chip data	0.7	□□□□□ -2.3	not detected
BUD3	YCL014W	TIR3	P40552	269 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	HYR1	P40581	163 aa	Known RBP	0.7	□□□□□ -2.3
BUD3	YCL014W	HUR1	P45820	110 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	HHO1	P53551	258 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	SEI1	Q06058	285 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YLR162W	Q06235	118 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	RAD6	P06104	172 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YCR087C-A	P37263	153 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YHR140W	P38842	239 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	NSE4	P43124	402 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	CUE4	Q04201	117 aa	Predicted RBP	0.7	□□□□□ -2.3
BUD3	YCL014W	YLR112W	Q12130	139 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	ATP5	P09457	212 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	PRE1	P22141	198 aa	Known RBP	0.7	□□□□□ -2.3
BUD3	YCL014W	YCR006C	P25350	157 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YCR025C	P25352	136 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	QRI5	P32344	111 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	TIR2	P33890	251 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	IES5	P40060	125 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	PAU12	P53343	120 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	YHR007C-A	Q07074	71 aa		0.7	□□□□□ -2.3
BUD3	YCL014W	PAU19	P0CE85	124 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	FUR1	P18562	216 aa	Known RBP	0.69	□□□□□ -2.3
BUD3	YCL014W	PAU16	P35994	123 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	RRN10	P38204	145 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	PAU15	P40585	124 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	PIR3	Q03180	325 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	SHH4	Q06236	168 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	PAU17	Q12370	124 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	NUC1	P08466	329 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	NHP6A	P11632	93 aa	Known RBP	0.69	□□□□□ -2.3
BUD3	YCL014W	KRE1	P17260	313 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	CBT1	P36038	271 aa	Predicted RBP	0.69	□□□□□ -2.3
BUD3	YCL014W	OXA1	P39952	402 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	ALB1	P47019	175 aa	Predicted RBP	0.69	□□□□□ -2.3
BUD3	YCL014W	TOM7	P53507	60 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	COG5	P53951	403 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	PET117	Q02771	107 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	FCY1	Q12178	158 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	YLR462W	O13556	202 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	MRP1	P10662	321 aa	Known RBP	0.69	□□□□□ -2.3
BUD3	YCL014W	RIB1	P38066	345 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	MBA1	P38300	278 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	YMR030W-A	Q3E760	96 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.69	□□□□□ -2.3
BUD3	YCL014W	OST6	Q03723	332 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	YLR042C	Q07990	161 aa		0.69	□□□□□ -2.3
BUD3	YCL014W	YDR366C	P87287	132 aa		0.68	□□□□□ -2.3
BUD3	YCL014W	YHP1	Q04116	353 aa		0.68	□□□□□ -2.3
BUD3	YCL014W	ZEO1	Q08245	113 aa		0.68	□□□□□ -2.3
BUD3	YCL014W	TRX2	P22803	104 aa	Known RBP	0.68	□□□□□ -2.3
BUD3	YCL014W	HSP12	P22943	109 aa	Known RBP	0.68	□□□□□ -2.3
BUD3	YCL014W	KRE9	P39005	276 aa		0.68	□□□□□ -2.3
BUD3	YCL014W	POG1	P40473	351 aa		0.68	□□□□□ -2.3
BUD3	YCL014W	GPG1	P53130	126 aa		0.68	□□□□□ -2.3
BUD3	YCL014W	YHR213W	P0CI67	198 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms