RNA–Protein interactions for RNA: YBR201W

DER1, Transcript of ER membrane protein that promotes export of misfolded polypeptides, yeast

Gene DER1, Length 636 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DER1	YBR201W	GTO3	Q04806	366 aa		2.8	□□□□□ -1.96
DER1	YBR201W	ATG39	Q06159	398 aa		2.8	□□□□□ -1.96
DER1	YBR201W	FSF1	Q12029	327 aa	Known RBP	2.8	□□□□□ -1.96
DER1	YBR201W	PRM7	Q12459	698 aa		2.8	□□□□□ -1.96
DER1	YBR201W	YLR342W-A	Q3E810	57 aa		2.8	□□□□□ -1.96
DER1	YBR201W	COA6	Q3E846	104 aa		2.8	□□□□□ -1.96
DER1	YBR201W	RPL12A	P0CX53	165 aa	Known RBP	2.79	□□□□□ -1.96
DER1	YBR201W	RPL12B	P0CX54	165 aa		2.79	□□□□□ -1.96
DER1	YBR201W	FUN14	P18411	198 aa		2.79	□□□□□ -1.96
DER1	YBR201W	SIM1	P40472	476 aa		2.79	□□□□□ -1.96
DER1	YBR201W	DIA1	P54005	336 aa		2.79	□□□□□ -1.96
DER1	YBR201W	UPS3	Q04006	179 aa		2.79	□□□□□ -1.96
DER1	YBR201W	ARC18	Q05933	178 aa	Known RBP	2.79	□□□□□ -1.96
DER1	YBR201W	PRM3	Q08931	133 aa		2.79	□□□□□ -1.96
DER1	YBR201W	TIM22	Q12328	207 aa		2.79	□□□□□ -1.96
DER1	YBR201W	UTP23	Q12339	254 aa	Known RBP	2.79	□□□□□ -1.96
DER1	YBR201W	MRPL23	Q12487	163 aa	Predicted RBP	2.79	□□□□□ -1.96
DER1	YBR201W	UTP20	P35194	2493 aa	Known RBP	2.79	□□□□□ -1.96
DER1	YBR201W	RPL27A	P0C2H6	136 aa	Known RBP	2.78	□□□□□ -1.96
DER1	YBR201W	CPT1	P17898	393 aa		2.78	□□□□□ -1.96
DER1	YBR201W	AGA1	P32323	725 aa		2.78	□□□□□ -1.96
DER1	YBR201W	GSP1	P32835	219 aa	Known RBP	2.78	□□□□□ -1.96
DER1	YBR201W	GSP2	P32836	220 aa	Known RBP	2.78	□□□□□ -1.96
DER1	YBR201W	YHR140W	P38842	239 aa		2.78	□□□□□ -1.96
DER1	YBR201W	TEM1	P38987	245 aa		2.78	□□□□□ -1.96
DER1	YBR201W	YER135C	P40082	130 aa		2.78	□□□□□ -1.96
DER1	YBR201W	MRPL49	P40858	161 aa	Predicted RBP	2.78	□□□□□ -1.96
DER1	YBR201W	CDC40	P40968	455 aa	Predicted RBP	2.78	□□□□□ -1.96
DER1	YBR201W	FIP1	P45976	327 aa		2.78	□□□□□ -1.96
DER1	YBR201W	RPA43	P46669	326 aa		2.78	□□□□□ -1.96
DER1	YBR201W	YGL118C	P53132	145 aa		2.78	□□□□□ -1.96
DER1	YBR201W	GPI19	Q04082	140 aa		2.78	□□□□□ -1.96
DER1	YBR201W	MSC3	Q05812	728 aa		2.78	□□□□□ -1.96
DER1	YBR201W	YOL085C	Q99345	113 aa		2.78	□□□□□ -1.96
DER1	YBR201W	YHR212W-A	P0CX91	67 aa		2.77	□□□□□ -1.97
DER1	YBR201W	YHR022C	P38763	256 aa		2.77	□□□□□ -1.97
DER1	YBR201W	YNL200C	P40165	246 aa	Known RBP	2.77	□□□□□ -1.97
DER1	YBR201W	YJL028W	P47062	111 aa		2.77	□□□□□ -1.97
DER1	YBR201W	ERV14	P53173	138 aa		2.77	□□□□□ -1.97
DER1	YBR201W	PKR1	Q03880	122 aa	Known RBP	2.77	□□□□□ -1.97
DER1	YBR201W	MSA1	Q08471	629 aa		2.77	□□□□□ -1.97
DER1	YBR201W	YPL162C	Q12042	273 aa		2.77	□□□□□ -1.97
DER1	YBR201W	LSO2	Q3E772	92 aa	Known RBP	2.77	□□□□□ -1.97
DER1	YBR201W	YNL146C-A	Q3E7Z1	64 aa		2.77	□□□□□ -1.97
DER1	YBR201W	YPR014C	Q6B0W2	109 aa		2.77	□□□□□ -1.97
DER1	YBR201W	TRA1	P38811	3744 aa		2.77	□□□□□ -1.97
DER1	YBR201W	Q0255	P03881	472 aa		2.76	□□□□□ -1.97
DER1	YBR201W	MRPL44	P19956	98 aa		2.76	□□□□□ -1.97
DER1	YBR201W	YKR032W	P36127	104 aa		2.76	□□□□□ -1.97
DER1	YBR201W	ECM33	P38248	429 aa	Known RBP	2.76	□□□□□ -1.97
DER1	YBR201W	MIG3	P39943	394 aa		2.76	□□□□□ -1.97
DER1	YBR201W	KEG1	P43614	200 aa		2.76	□□□□□ -1.97
DER1	YBR201W	COX16	P47081	118 aa		2.76	□□□□□ -1.97
DER1	YBR201W	YMR244W	Q04018	355 aa		2.76	□□□□□ -1.97
DER1	YBR201W	TVP18	Q04767	167 aa		2.76	□□□□□ -1.97
DER1	YBR201W	TPT1	Q12272	230 aa	Known RBP	2.76	□□□□□ -1.97
DER1	YBR201W	YOR097C	Q12274	175 aa	Predicted RBP	2.76	□□□□□ -1.97
DER1	YBR201W	YGR035W-A	Q45U48	73 aa		2.76	□□□□□ -1.97
DER1	YBR201W	SCM4	P32564	187 aa		2.75	□□□□□ -1.97
DER1	YBR201W	PAU16	P35994	123 aa		2.75	□□□□□ -1.97
DER1	YBR201W	PET8	P38921	284 aa		2.75	□□□□□ -1.97
DER1	YBR201W	SPI1	P40092	148 aa		2.75	□□□□□ -1.97
DER1	YBR201W	ALG13	P53178	202 aa		2.75	□□□□□ -1.97
DER1	YBR201W	BRP1	P53194	125 aa		2.75	□□□□□ -1.97
DER1	YBR201W	YIL014C-A	Q02598	104 aa		2.75	□□□□□ -1.97
DER1	YBR201W	DPP1	Q05521	289 aa		2.75	□□□□□ -1.97
DER1	YBR201W	CCW12	Q12127	133 aa		2.75	□□□□□ -1.97
DER1	YBR201W	FYV7	Q12247	151 aa		2.75	□□□□□ -1.97
DER1	YBR201W	SCS22	Q6Q595	175 aa		2.75	□□□□□ -1.97
DER1	YBR201W	TAR1	Q8TGM6	124 aa		2.75	□□□□□ -1.97
DER1	YBR201W	SAL1	D6W196	494 aa		2.74	□□□□□ -1.97
DER1	YBR201W	YCR023C	P25351	611 aa		2.74	□□□□□ -1.97
DER1	YBR201W	KTI12	P34253	313 aa	Known RBP	2.74	□□□□□ -1.97
DER1	YBR201W	PRY2	P36110	329 aa		2.74	□□□□□ -1.97
DER1	YBR201W	YER076C	P40049	302 aa		2.74	□□□□□ -1.97
DER1	YBR201W	AGE2	P40529	298 aa		2.74	□□□□□ -1.97
DER1	YBR201W	HAC1	P41546	238 aa		2.74	□□□□□ -1.97
DER1	YBR201W	MIC26	P50087	233 aa		2.74	□□□□□ -1.97
DER1	YBR201W	POP3	P53833	195 aa	Predicted RBP	2.74	□□□□□ -1.97
DER1	YBR201W	MRPS8	Q03799	155 aa		2.74	□□□□□ -1.97
DER1	YBR201W	GRH1	Q04410	372 aa	Known RBP	2.74	□□□□□ -1.97
DER1	YBR201W	CNL1	Q06333	122 aa		2.74	□□□□□ -1.97
DER1	YBR201W	NAT5	Q08689	176 aa		2.74	□□□□□ -1.97
DER1	YBR201W	YBR200W-A	Q3E755	54 aa		2.74	□□□□□ -1.97
DER1	YBR201W	HTL1	Q9URQ5	78 aa		2.74	□□□□□ -1.97
DER1	YBR201W	VAR1	P02381	398 aa		2.73	□□□□□ -1.97
DER1	YBR201W	ATP5	P09457	212 aa		2.73	□□□□□ -1.97
DER1	YBR201W	PRE1	P22141	198 aa	Known RBP	2.73	□□□□□ -1.97
DER1	YBR201W	RPL16B	P26785	198 aa	Known RBP	2.73	□□□□□ -1.97
DER1	YBR201W	YKL102C	P34249	101 aa		2.73	□□□□□ -1.97
DER1	YBR201W	FYV4	P38783	130 aa	Predicted RBP	2.73	□□□□□ -1.97
DER1	YBR201W	MPC2	P38857	129 aa		2.73	□□□□□ -1.97
DER1	YBR201W	MSL1	P40567	111 aa	Predicted RBP	2.73	□□□□□ -1.97
DER1	YBR201W	SAE3	P89114	91 aa		2.73	□□□□□ -1.97
DER1	YBR201W	PFY1	P07274	126 aa		2.72	□□□□□ -1.97
DER1	YBR201W	CPR1	P14832	162 aa	Known RBP	2.72	□□□□□ -1.97
DER1	YBR201W	MIG1	P27705	504 aa		2.72	□□□□□ -1.97
DER1	YBR201W	UTR5	P32630	166 aa		2.72	□□□□□ -1.97
DER1	YBR201W	APS1	P35181	156 aa		2.72	□□□□□ -1.97
DER1	YBR201W	VHS2	P40463	436 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms