RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	RPGRIP1	Q96KN7	1286 aa		12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	C8orf48	Q96LL4	319 aa		12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	CEP295NL	Q96MC4	621 aa		12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	MYADM	Q96S97	322 aa		12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	UHRF1	Q96T88	793 aa	Predicted RBP	12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	HNRNPAB	Q99729	332 aa	Known RBP	12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	IL21	Q9HBE4	155 aa		12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	FAM49B	Q9NUQ9	324 aa		12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	TCF20	Q9UGU0	1960 aa	Known RBP	12.41	□□□□□ -0.42
RANBP3-228	ENST00000592621	LGALS16	A8MUM7	142 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621		F8VP50	259 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	TNFRSF10B	O14763	440 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	TRIM66	O15016	1216 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	BEST1	O76090	585 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	CSH1	P0DML2	217 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	CSH2	P0DML3	217 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	GRIK1	P39086	918 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	MTMR3	Q13615	1198 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	VEPH1	Q14D04	833 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	ARHGAP17	Q68EM7	881 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	SMYD5	Q6GMV2	418 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	LRSAM1	Q6UWE0	723 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	GAREM2	Q75VX8	874 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	PDZD4	Q76G19	769 aa	Predicted RBP	12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	GET4	Q7L5D6	327 aa	Predicted RBP	12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	ENOSF1	Q7L5Y1	443 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	TMEM150A	Q86TG1	271 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	ITIH5	Q86UX2	942 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	LUZP1	Q86V48	1076 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	SCN4B	Q8IWT1	228 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	ZDHHC14	Q8IZN3	488 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	FAM200A	Q8TCP9	573 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	TRMT2B	Q96GJ1	504 aa	Known RBP	12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	SMARCD1	Q96GM5	515 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	FAM81B	Q96LP2	452 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	MYRFL	Q96LU7	910 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	KCNK16	Q96T55	309 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	SMO	Q99835	787 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	NAA15	Q9BXJ9	866 aa	Known RBP	12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	ASAH2	Q9NR71	780 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	12.4	□□□□□ -0.42	1e-8	■■■■□ 25
RANBP3-228	ENST00000592621	EPS15L1	Q9UBC2	864 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	SIK3	Q9Y2K2	1263 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	NR2E1	Q9Y466	385 aa		12.4	□□□□□ -0.42
RANBP3-228	ENST00000592621	ATP8B3	O60423	1300 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	SLC38A8	A6NNN8	435 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	BECN2	A8MW95	431 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	HHLA1	C9JL84	531 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	ZNF197	O14709	1029 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	TADA3	O75528	432 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	AP1G2	O75843	785 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	F11	P03951	625 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	PAEP	P09466	180 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	CEBPB	P17676	345 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	CDK11B	P21127	795 aa	Known RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	SP100	P23497	879 aa	Predicted RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	MFAP3	P55082	362 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	CYP4A22	Q5TCH4	519 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	KLHDC7A	Q5VTJ3	777 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	TMEM270	Q6UE05	265 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	CLEC20A	Q6ZU45	233 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	OTOP3	Q7RTS5	596 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	NPAS3	Q8IXF0	933 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	GJD3	Q8N144	294 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	TDRD5	Q8NAT2	981 aa	Known RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	SHKBP1	Q8TBC3	707 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	SHC3	Q92529	594 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	FGF13	Q92913	245 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	ACSF2	Q96CM8	615 aa	Predicted RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	HEXIM2	Q96MH2	286 aa	Known RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	ZSWIM1	Q9BR11	485 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	MED10	Q9BTT4	135 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	TTLL2	Q9BWV7	592 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	GPR88	Q9GZN0	384 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	DMAP1	Q9NPF5	467 aa	Predicted RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	PLCB1	Q9NQ66	1216 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	KRT82	Q9NSB4	513 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	CDH7	Q9ULB5	785 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	MRPS23	Q9Y3D9	190 aa	Known RBP	12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621	PCDHB4	Q9Y5E5	795 aa		12.39	□□□□□ -0.43
RANBP3-228	ENST00000592621		A0A1W2PRU2	124 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621		O00370	1275 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	PES1	O00541	588 aa	Known RBP	12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	TPM2	P07951	284 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	FAM200B	P0CF97	657 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	VDR	P11473	427 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	MYL4	P12829	197 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	LAMP2	P13473	410 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	GJA1	P17302	382 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	TRIM21	P19474	475 aa	Known RBP	12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	GABRR2	P28476	465 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	ADORA2B	P29275	332 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	KLK7	P49862	253 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	ZNF445	P59923	1031 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	USP46	P62068	366 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	PKDCC	Q504Y2	493 aa		12.38	□□□□□ -0.43
RANBP3-228	ENST00000592621	DENND5B	Q6ZUT9	1274 aa		12.38	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms