RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 MSANTD4Q8NCY6 345 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC112Q8NEF3 446 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 SLC22A17Q8WUG5 538 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 C8orf48Q96LL4 319 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC42Q96M95 316 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 PGLYRP2Q96PD5 576 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 GAS2L1Q99501 681 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 MIS12Q9H081 205 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 DEF6Q9H4E7 631 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CSNK1G1Q9HCP0 422 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 PNPLA8Q9NP80 782 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 CYLDQ9NQC7 956 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 FAM49BQ9NUQ9 324 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 TMLHEQ9NVH6 421 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 ABI2Q9NYB9 513 aaPredicted RBP11.3□□□□□ -0.6
SMAD4-214ENST00000592186 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
SMAD4-214ENST00000592186 AP1G2O75843 785 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 MICAL2O94851 1124 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
SMAD4-214ENST00000592186 GZMAP12544 262 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 SKILP12757 684 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 CCDC130P13994 396 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 CYP2F1P24903 491 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 ADORA2BP29275 332 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
SMAD4-214ENST00000592186 DUSP4Q13115 394 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 DUSP6Q16828 381 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 GOLGA7BQ2TAP0 167 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 MGAT5BQ3V5L5 792 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 HGSNATQ68CP4 663 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 WDR59Q6PJI9 974 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 FAM35AQ86V20 835 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 GLYCTKQ8IVS8 523 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 KREMEN2Q8NCW0 462 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 SLC35F5Q8WV83 523 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 LRCH3Q96II8 777 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 SPATA17Q96L03 361 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 PPP1R9BQ96SB3 815 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 BAG1Q99933 345 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-214ENST00000592186 LPIN3Q9BQK8 851 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 CYP4F11Q9HBI6 524 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 DMAP1Q9NPF5 467 aaPredicted RBP11.29□□□□□ -0.6
SMAD4-214ENST00000592186 ACP6Q9NPH0 428 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 COMMD8Q9NX08 183 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 ARHGAP20Q9P2F6 1191 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 ASB3Q9Y575 518 aa11.29□□□□□ -0.6
SMAD4-214ENST00000592186 CHD7Q9P2D1 2997 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 GBF1Q92538 1859 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 KIAA1671Q9BY89 1806 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 M0QYV0 167 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 CLDN5O00501 218 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 AKR1B10O60218 316 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 MMEP08473 750 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 HNRNPA1P09651 372 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 CHRNB2P17787 502 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 FECHP22830 423 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 CDH5P33151 784 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 EIF4A3P38919 411 aaKnown RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 GPD2P43304 727 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 ACADSBP45954 432 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 NRIP1P48552 1158 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 EPHB3P54753 998 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 VEPH1Q14D04 833 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 PKDCCQ504Y2 493 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 TAF3Q5VWG9 929 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 LRRC8AQ8IWT6 810 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 UBA3Q8TBC4 463 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 KCTD13Q8WZ19 329 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 CASP10Q92851 521 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 SYT11Q9BT88 431 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 NHEJ1Q9H9Q4 299 aaPredicted RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 KRT82Q9NSB4 513 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 SEPT11Q9NVA2 429 aaKnown RBP11.28□□□□□ -0.6
SMAD4-214ENST00000592186 DZANK1Q9NVP4 752 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 ZDHHC7Q9NXF8 308 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 ADAMTS1Q9UHI8 967 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 FBXW11Q9UKB1 542 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 SLC27A5Q9Y2P5 690 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 MTCH2Q9Y6C9 303 aa11.28□□□□□ -0.6
SMAD4-214ENST00000592186 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.6
SMAD4-214ENST00000592186 TRANK1O15050 2925 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 PER2O15055 1255 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 CSPG5O95196 566 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 IPO7O95373 1038 aaKnown RBP11.27□□□□□ -0.61
SMAD4-214ENST00000592186 CYP1A1P04798 512 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-214ENST00000592186 IGFBP4P22692 258 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 HOXA9P31269 272 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 CYLC1P35663 651 aaPredicted RBP11.27□□□□□ -0.61
SMAD4-214ENST00000592186 NSFP46459 744 aaKnown RBP11.27□□□□□ -0.61
SMAD4-214ENST00000592186 PLA2G4AP47712 749 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 MAP3K7CLP57077 242 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 FMO1Q01740 532 aa11.27□□□□□ -0.61
SMAD4-214ENST00000592186 PDE4CQ08493 712 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms