RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RBP5P82980 135 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 FKBP3Q00688 224 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 YWHAHQ04917 246 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 PAK1Q13153 545 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 RAB33AQ14088 237 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 SURF1Q15526 300 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 AAK1Q2M2I8 961 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 SOWAHAQ2M3V2 549 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 LEXMQ3ZCV2 418 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 CBWD6Q4V339 395 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 CBWD3Q5JTY5 395 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 CBWD5Q5RIA9 395 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 C11orf57Q6ZUT1 292 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 LRRTM3Q86VH5 581 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 NPAS3Q8IXF0 933 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 GPR65Q8IYL9 337 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 VWA5B2Q8N398 1253 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 PDCL2Q8N4E4 241 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 TTC9BQ8N6N2 239 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 LRRC52Q8N7C0 313 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 SMRP1Q8NCR6 262 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 TAS1R2Q8TE23 839 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 CACTINQ8WUQ7 758 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 SLC35C1Q96A29 364 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 ZNF707Q96C28 371 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 HPDLQ96IR7 371 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 CDCA3Q99618 268 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 MRPL45Q9BRJ2 306 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 PI4K2AQ9BTU6 479 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 EMILIN2Q9BXX0 1053 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 APOBEC3GQ9HC16 384 aaKnown RBP10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 MAN1C1Q9NR34 630 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 TMLHEQ9NVH6 421 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 STK39Q9UEW8 545 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 FBXW11Q9UKB1 542 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 FRMD4BQ9Y2L6 1034 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 PCDHGC4Q9Y5F7 938 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 SNX9Q9Y5X1 595 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 BACE2Q9Y5Z0 518 aa10.16□□□□□ -0.78
NPLOC4-219ENST00000576713 CDC14CA4D256 554 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 GOLGA6L22H0YM25 854 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 ATXN7O15265 892 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 SLC16A3O15427 465 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 MBTPS2O43462 519 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 ABLIM3O94929 683 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 MBD3O95983 291 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 GLUD1P00367 558 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 HLA-DRAP01903 254 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 TYMPP19971 482 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 ACAT1P24752 427 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 LMO2P25791 158 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 RPL13P26373 211 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 RAP1GAPP47736 663 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 IDH3AP50213 366 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 CDH8P55286 799 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 TYRO3Q06418 890 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 SV2CQ496J9 727 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 CTXN3Q4LDR2 81 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 RARS2Q5T160 578 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 OVOS1Q6IE37 1185 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 ALKBH2Q6NS38 261 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 CAVIN1Q6NZI2 390 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 TMC5Q6UXY8 1006 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 ANKS3Q6ZW76 656 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 INTS8Q75QN2 995 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 KREMEN2Q8NCW0 462 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 GTPBP3Q969Y2 492 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 ZNF560Q96MR9 790 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 CEP63Q96MT8 703 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 PGLYRP2Q96PD5 576 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 PKMYT1Q99640 499 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 TSG101Q99816 390 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 SRRTQ9BXP5 876 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 SMYD3Q9H7B4 428 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 GDAP2Q9NXN4 497 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 RWDD2AQ9UIY3 292 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 CD207Q9UJ71 328 aa10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 USP15Q9Y4E8 981 aaPredicted RBP10.15□□□□□ -0.78
NPLOC4-219ENST00000576713 GABRDO14764 452 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 IKBKBO14920 756 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 ATP2C2O75185 946 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 SOAT2O75908 522 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 ODC1P11926 461 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 PNPLA4P41247 253 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 BIRC3Q13489 604 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 STIM1Q13586 685 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 HSP90AA4PQ58FG1 418 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 DCAF17Q5H9S7 520 aaPredicted RBP10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 CCDC183Q5T5S1 534 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 ZNF280DQ6N043 979 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 FOXR2Q6PJQ5 311 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 SCARA5Q6ZMJ2 495 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 FILIP1Q7Z7B0 1213 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 ATCAYQ86WG3 371 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 MLKLQ8NB16 471 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 SUSD6Q92537 303 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 CASP10Q92851 521 aa10.14□□□□□ -0.79
NPLOC4-219ENST00000576713 PPP2R3CQ969Q6 453 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms