RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 FAM102AQ5T9C2 384 aaPredicted RBP20.51■□□□□ 0.87
CDH5-204ENST00000563425 CEP128Q6ZU80 1094 aa20.51■□□□□ 0.87
CDH5-204ENST00000563425 SERPINB12Q96P63 405 aa20.51■□□□□ 0.87
CDH5-204ENST00000563425 MIS12Q9H081 205 aa20.51■□□□□ 0.87
CDH5-204ENST00000563425 GMNCA6NCL1 334 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 RNF8O76064 485 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 PFKMP08237 780 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 ZNF865P0CJ78 1059 aaPredicted RBP20.5■□□□□ 0.87
CDH5-204ENST00000563425 MIPP30301 263 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 ARSEP51690 589 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 ZNF143P52747 638 aaPredicted RBP20.5■□□□□ 0.87
CDH5-204ENST00000563425 YARSP54577 528 aaKnown RBP20.5■□□□□ 0.87
CDH5-204ENST00000563425 MFSD10Q14728 455 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 OLFML2BQ68BL8 750 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 BBS12Q6ZW61 710 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 B4GALNT4Q76KP1 1039 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 TLK2Q86UE8 772 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 CMASQ8NFW8 434 aaPredicted RBP20.5■□□□□ 0.87
CDH5-204ENST00000563425 HAUS1Q96CS2 278 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 FRMD8P1Q9BZ68 369 aaPredicted RBP20.5■□□□□ 0.87
CDH5-204ENST00000563425 FLRT1Q9NZU1 646 aa20.5■□□□□ 0.87
CDH5-204ENST00000563425 PPEF2O14830 753 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 TCEA3O75764 348 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 TRUB2O95900 331 aaKnown RBP20.49■□□□□ 0.87
CDH5-204ENST00000563425 ADAM17P78536 824 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 HIC1Q14526 733 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 LONRF1Q17RB8 773 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 ALKAL1Q6UXT8 129 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 LRRC52Q8N7C0 313 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 MDM1Q8TC05 714 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 PPP1R13LQ8WUF5 828 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 MRPL45Q9BRJ2 306 aaKnown RBP20.49■□□□□ 0.87
CDH5-204ENST00000563425 ASNSD1Q9NWL6 643 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 TUBGCP4Q9UGJ1 667 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 TULP2O00295 520 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 ZSCAN5DPP0CG00 497 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 ETS1P14921 441 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 PCK1P35558 622 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 GOLGA7BQ2TAP0 167 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 C12orf29Q8N999 325 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 TTC13Q8NBP0 860 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 BEST2Q8NFU1 509 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 PCDH9Q9HC56 1237 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 CNTN3Q9P232 1028 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 PCSK1NQ9UHG2 260 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 TPX2Q9ULW0 747 aaKnown RBP20.49■□□□□ 0.87
CDH5-204ENST00000563425 HES2Q9Y543 173 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 SNX9Q9Y5X1 595 aa20.49■□□□□ 0.87
CDH5-204ENST00000563425 C2CD4BA6NLJ0 364 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 E5RJQ4 531 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 MYO1CO00159 1063 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 HAS3O00219 553 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 CST8O60676 142 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 GPD1P21695 349 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 AXLP30530 894 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 GPS1Q13098 491 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 PKDCCQ504Y2 493 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 ERMARDQ5T6L9 678 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 FAM183BPQ6ZVS7 135 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 ACTL9Q8TC94 416 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 C18orf25Q96B23 403 aaPredicted RBP20.48■□□□□ 0.87
CDH5-204ENST00000563425 LENG1Q96BZ8 264 aaPredicted RBP20.48■□□□□ 0.87
CDH5-204ENST00000563425 CNPY3Q9BT09 278 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 TMEM121Q9BTD3 319 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 NXF3Q9H4D5 531 aaKnown RBP20.48■□□□□ 0.87
CDH5-204ENST00000563425 USP18Q9UMW8 372 aa20.48■□□□□ 0.87
CDH5-204ENST00000563425 CD48P09326 243 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 CHN1P15882 459 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 PSEN2P49810 448 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 OTUD4Q01804 1114 aaKnown RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 PLCB3Q01970 1234 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 PPP1R26Q5T8A7 1209 aaPredicted RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 OR6B2Q6IFH4 312 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 TRNP1Q6NT89 227 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 KCTD6Q8NC69 237 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 XPO6Q96QU8 1125 aaKnown RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 RBM15Q96T37 977 aaKnown RBP eCLIP20.47■□□□□ 0.87
CDH5-204ENST00000563425 SELENOSQ9BQE4 189 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 SGK1O00141 431 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 NDC80O14777 642 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 RECQL4O94761 1208 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 ECM2O94769 699 aaPredicted RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 MAGEA4P43358 317 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 DYNLT1P63172 113 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 IRX5P78411 483 aaPredicted RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 MORF4L2Q15014 288 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 TAF5Q15542 800 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 C9orf57Q5W0N0 161 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 CST9Q5W186 159 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 TAOK1Q7L7X3 1001 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 ACOT1Q86TX2 421 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 SPATS2Q86XZ4 545 aaKnown RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 DNAJB3Q8WWF6 145 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 RXFP2Q8WXD0 754 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 TRIM6Q9C030 488 aaPredicted RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 FAM107BQ9H098 131 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 RRAGCQ9HB90 399 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 SAE1Q9UBE0 346 aaPredicted RBP20.47■□□□□ 0.87
CDH5-204ENST00000563425 NME7Q9Y5B8 376 aa20.47■□□□□ 0.87
CDH5-204ENST00000563425 IGF2BP3O00425 579 aaKnown RBP eCLIP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms