RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 AFF1P51825 1210 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 RPL7AP62424 266 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 RBM10P98175 930 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 ZNF211Q13398 564 aaPredicted RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 HADHQ16836 314 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 FAM102AQ5T9C2 384 aaPredicted RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 OR6B2Q6IFH4 312 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 CC2D1AQ6P1N0 951 aaPredicted RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 MAATS1Q7Z4T9 603 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 KATNAL2Q8IYT4 538 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 ABI1Q8IZP0 508 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 EXD1Q8NHP7 514 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 HNRNPLLQ8WVV9 542 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 LINC01599Q8WXQ3 324 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 RBM41Q96IZ5 413 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 FAM193BQ96PV7 902 aaPredicted RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 KRT12Q99456 494 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 LRRC1Q9BTT6 524 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 EPC1Q9H2F5 836 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 ARFGAP3Q9NP61 516 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 METTL5Q9NRN9 209 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 ASNSD1Q9NWL6 643 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 DDX43Q9NXZ2 648 aaKnown RBP14.52□□□□□ -0.09
TPM1-215ENST00000558868 LRFN2Q9ULH4 789 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 USTQ9Y2C2 406 aa14.52□□□□□ -0.09
TPM1-215ENST00000558868 TDRD15B5MCY1 1934 aaKnown RBP14.51□□□□□ -0.09
TPM1-215ENST00000558868 E5RJQ4 531 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 TMEM189-UBE2V1I3L0A0 370 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 M0QZQ0 153 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 XPO1O14980 1071 aaKnown RBP14.51□□□□□ -0.09
TPM1-215ENST00000558868 ZRANB2O95218 330 aaKnown RBP eCLIP14.51□□□□□ -0.09
TPM1-215ENST00000558868 PYGMP11217 842 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 CCDC130P13994 396 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 TYMPP19971 482 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 RFC1P35251 1148 aaPredicted RBP14.51□□□□□ -0.09
TPM1-215ENST00000558868 MARCKSL1P49006 195 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 RPL34P49207 117 aaKnown RBP14.51□□□□□ -0.09
TPM1-215ENST00000558868 COPS2P61201 443 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 PLCB3Q01970 1234 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 RNASELQ05823 741 aaKnown RBP14.51□□□□□ -0.09
TPM1-215ENST00000558868 PDE4CQ08493 712 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 TIGD5Q53EQ6 642 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 ODF2Q5BJF6 829 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 POLNQ7Z5Q5 900 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 SLC13A5Q86YT5 568 aaPredicted RBP14.51□□□□□ -0.09
TPM1-215ENST00000558868 IFT20Q8IY31 132 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 RCOR2Q8IZ40 523 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 THEM5Q8N1Q8 247 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 DBF4BQ8NFT6 615 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 SLC2A14Q8TDB8 520 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 ZNF333Q96JL9 665 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 SUSD3Q96L08 255 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 PNKPQ96T60 521 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 SYT15Q9BQS2 421 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 MED10Q9BTT4 135 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 AP1M1Q9BXS5 423 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 DUSP16Q9BY84 665 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 HIPK3Q9H422 1215 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.51□□□□□ -0.09
TPM1-215ENST00000558868 STIM2Q9P246 746 aa14.51□□□□□ -0.09
TPM1-215ENST00000558868 ATP8B1O43520 1251 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 TRAPPC3O43617 180 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 RNF8O76064 485 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 GJB6O95452 261 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 CXCL10P02778 98 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 KRT7P08729 469 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 GPD1P21695 349 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 PLA2G4AP47712 749 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 CLCN6P51797 869 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 ZNF143P52747 638 aaPredicted RBP14.5□□□□□ -0.09
TPM1-215ENST00000558868 SLC6A3Q01959 620 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 DSC1Q08554 894 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 MAPRE1Q15691 268 aaKnown RBP14.5□□□□□ -0.09
TPM1-215ENST00000558868 CLLU1OSQ5K130 101 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 PMF1Q6P1K2 205 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 FAM183BPQ6ZVS7 135 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 ARCQ7LC44 396 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 KLHL7Q8IXQ5 586 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 C3orf58Q8NDZ4 430 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 ARMC5Q96C12 935 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 ACBD6Q9BR61 282 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 CNPY3Q9BT09 278 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 HOMER3Q9NSC5 361 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 PCDHB8Q9UN66 801 aa14.5□□□□□ -0.09
TPM1-215ENST00000558868 DPYSL4O14531 572 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 FSCN2O14926 492 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 SART1O43290 800 aaKnown RBP14.49□□□□□ -0.09
TPM1-215ENST00000558868 PHF2O75151 1096 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 FAM200BP0CF97 657 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 NPR3P17342 541 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 TNFRSF8P28908 595 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 CHRNA3P32297 505 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 RFC2P35250 354 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 RGS7P49802 495 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 ATN1P54259 1190 aaPredicted RBP14.49□□□□□ -0.09
TPM1-215ENST00000558868 TAS2R40P59535 323 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 VSNL1P62760 191 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 OGDHQ02218 1023 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 ZNF252P-AS1Q0IIN9 211 aa14.49□□□□□ -0.09
TPM1-215ENST00000558868 DHX34Q14147 1143 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms