RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 CKMP06732 381 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 CXCL8P10145 99 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 TCF3P15923 654 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 GABRG2P18507 467 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 EIF2S3P41091 472 aaKnown RBP15□□□□□ -0.01
NKX3-1-202ENST00000523261 NPTX2P47972 431 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
NKX3-1-202ENST00000523261 YTHDC1Q96MU7 727 aaKnown RBP15□□□□□ -0.01
NKX3-1-202ENST00000523261 KIF2CQ99661 725 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 PI4K2AQ9BTU6 479 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 PLEKHA5Q9HAU0 1116 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 TRPC7Q9HCX4 862 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 CALCOCO1Q9P1Z2 691 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 ARHGAP28Q9P2N2 729 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 SUSD2Q9UGT4 822 aa15□□□□□ -0.01
NKX3-1-202ENST00000523261 UBQLN1Q9UMX0 589 aaKnown RBP15□□□□□ -0.01
NKX3-1-202ENST00000523261 A0A0A0MRY4 1105 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 TRAV19A0A0A6YYK7 116 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 TEX51A0A1B0GUA7 166 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 WNT7AO00755 349 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 KAT7O95251 611 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 CYP17A1P05093 508 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 ZNF883P0CG24 379 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 CSH1P0DML2 217 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 CSH2P0DML3 217 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 SLC6A11P48066 632 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 GPR15P49685 360 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 KCNC4Q03721 635 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 SRSF1Q07955 248 aaKnown RBP eCLIP14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 SMARCB1Q12824 385 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 NOLC1Q14978 699 aaKnown RBP eCLIP14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 SMAD1Q15797 465 aaKnown RBP14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 RGL4Q8IZJ4 473 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 ZNF419Q96HQ0 510 aaPredicted RBP14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 PNKPQ96T60 521 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 CDC6Q99741 560 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 PRDM16Q9HAZ2 1276 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 IL21RQ9HBE5 538 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 IGSF5Q9NSI5 407 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 ABI2Q9NYB9 513 aaPredicted RBP14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 GCNT4Q9P109 453 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 DACH1Q9UI36 760 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 ANAPC1Q9H1A4 1944 aa14.99□□□□□ -0.01
NKX3-1-202ENST00000523261 MYMKA6NI61 221 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 PYCARD-AS1I3L0S3 204 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 TLX3O43711 291 aaPredicted RBP14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 NEMFO60524 1076 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 APODP05090 189 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 PEX3P56589 373 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 NR5A1Q13285 461 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 LRRC69Q6ZNQ3 347 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 GPR155Q7Z3F1 870 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 ARL14EPQ8N8R7 260 aaPredicted RBP14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 SPATA18Q8TC71 538 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 LRRC15Q8TF66 581 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 TNFRSF25Q93038 417 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 UXTQ9UBK9 157 aaPredicted RBP14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 SNX14Q9Y5W7 946 aa14.98□□□□□ -0.01
NKX3-1-202ENST00000523261 GOLGA8CPA6NN73 597 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 TOM1L1O75674 476 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 HLA-EP13747 358 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 GNSP15586 552 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 RPA1P27694 616 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 EIF2DP41214 584 aaKnown RBP14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 TNFRSF4P43489 277 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 ZXDBP98169 803 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 TOB2Q14106 344 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 SDHAF4Q5VUM1 108 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 DBX2Q6ZNG2 339 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 C12orf40Q86WS4 652 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 DAW1Q8N136 415 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 RHBDD1Q8TEB9 315 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 TRMT2BQ96GJ1 504 aaKnown RBP14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 MYRFLQ96LU7 910 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 TM7SF3Q9NS93 570 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 ARHGAP26Q9UNA1 814 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 CYP8B1Q9UNU6 501 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 CABIN1Q9Y6J0 2220 aa14.97□□□□□ -0.01
NKX3-1-202ENST00000523261 MYOFQ9NZM1 2061 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 C2orf78A6NCI8 922 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 PLK4O00444 970 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 CILPO75339 1184 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 NOL4O94818 638 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 PAX3P23760 479 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 MAOBP27338 520 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 GRIA2P42262 883 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 SYCP2LQ5T4T6 812 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 CPLX2Q6PUV4 134 aaKnown RBP14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 ADGRG2Q8IZP9 1017 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 KNL1Q8NG31 2342 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 TMEM60Q9H2L4 133 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 BHMT2Q9H2M3 363 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 GAREM1Q9H706 876 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 ARHGEF4Q9NR80 690 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 TMLHEQ9NVH6 421 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 DNMT3LQ9UJW3 386 aa14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 FNDC3AQ9Y2H6 1198 aaKnown RBP14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 RBM19Q9Y4C8 960 aaKnown RBP14.96□□□□□ -0.01
NKX3-1-202ENST00000523261 PCDHB5Q9Y5E4 795 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms