RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 MEI4A8MW99 385 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 CXCL8P10145 99 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 HAPLN1P10915 354 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 MATKP42679 507 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 KIR2DL1P43626 348 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 EARS2Q5JPH6 523 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 COLEC12Q5KU26 742 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 C12orf40Q86WS4 652 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 BAHD1Q8TBE0 780 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 BAP1Q92560 729 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 NAF1Q96HR8 494 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 SENP8Q96LD8 212 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 ZCWPW1Q9H0M4 648 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 TTC12Q9H892 705 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 ARHGEF4Q9NR80 690 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 SUSD2Q9UGT4 822 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 DENND4CQ5VZ89 1909 aa11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 COL5A1P20908 1838 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-234ENST00000522227 OBSL1O75147 1896 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 C2orf78A6NCI8 922 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 ERVH48-1M5A8F1 160 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 MED24O75448 989 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 TADA3O75528 432 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 DKK1O94907 266 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 CYP17A1P05093 508 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 SPATA31C1P0DKV0 1188 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 MCF2P10911 925 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 ODC1P11926 461 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 XRCC6P12956 609 aaKnown RBP eCLIP11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 JUPP14923 745 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 CYP11B2P19099 503 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 TYMPP19971 482 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 SCRN1Q12765 414 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 RESTQ13127 1097 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 SMAD1Q15797 465 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 CALCRLQ16602 461 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 HLA-BQ31612 363 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 C6orf118Q5T5N4 469 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 LRRTM3Q86VH5 581 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 LRRC15Q8TF66 581 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 SPIRE2Q8WWL2 714 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 DRC1Q96MC2 740 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 PI4K2AQ9BTU6 479 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 MRPL4Q9BYD3 311 aaKnown RBP11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 ZDHHC5Q9C0B5 715 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 PTPRHQ9HD43 1115 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 GJB4Q9NTQ9 266 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 HSFX1Q9UBD0 423 aa11.94□□□□□ -0.5
CTNNA1-234ENST00000522227 USP9XQ93008 2570 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 A0A1B0GTW7 788 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 FLRT2O43155 660 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 PRPF40AO75400 957 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 DEXIO95424 95 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 CER1O95813 267 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 CSH1P0DML2 217 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 CSH2P0DML3 217 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 CHRM1P11229 460 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 HOXB2P14652 356 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 TNFSF9P41273 254 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 MATR3P43243 847 aaKnown RBP eCLIP11.93□□□□□ -0.56e-8■■■■□ 24.8
CTNNA1-234ENST00000522227 AARSP49588 968 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 PEX3P56589 373 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 DDR2Q16832 855 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 PREPLQ4J6C6 727 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 ARHGAP40Q5TG30 622 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 KIAA1324Q6UXG2 1013 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 FILIP1Q7Z7B0 1213 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 CATSPER3Q86XQ3 398 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 ZNF419Q96HQ0 510 aaPredicted RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 JAKMIP1Q96N16 626 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 NAP1L4Q99733 375 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 TMEM206Q9H813 350 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 COL6A6A6NMZ7 2263 aa11.93□□□□□ -0.5
CTNNA1-234ENST00000522227 NID2Q14112 1375 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 STK36Q9NRP7 1315 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 TBC1D3BA6NDS4 549 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 KCNK3O14649 394 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 ZBTB24O43167 697 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 TNFSF14O43557 240 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 C6P13671 934 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 HDCP19113 662 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 NDUFV2P19404 249 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 PDIA3P30101 505 aaKnown RBP11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 LRPAP1P30533 357 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 IL12RB1P42701 662 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 ATP2C1P98194 919 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 BNC1Q01954 994 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 TLE3Q04726 772 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 KCNH2Q12809 1159 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 KRT32Q14532 448 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 KCNB1Q14721 858 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 DHCR24Q15392 516 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 HSF5Q4G112 596 aaPredicted RBP11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 TAS1R3Q7RTX0 852 aa11.92□□□□□ -0.5
CTNNA1-234ENST00000522227 SPACA3Q8IXA5 215 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms