RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 COLGALT2Q8IYK4 626 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.4□□□□□ -1.38
SSR3-208ENST00000496050 FAM71BQ8TC56 605 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 SNX19Q92543 992 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 TBC1D20Q96BZ9 403 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 LOXL4Q96JB6 756 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 TRIM5Q9C035 493 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 GALNT9Q9HCQ5 603 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 DNMT3BQ9UBC3 853 aaKnown RBP6.4□□□□□ -1.38
SSR3-208ENST00000496050 NDRG4Q9ULP0 352 aaKnown RBP6.4□□□□□ -1.38
SSR3-208ENST00000496050 JAG2Q9Y219 1238 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 MRPS17Q9Y2R5 130 aaKnown RBP6.4□□□□□ -1.38
SSR3-208ENST00000496050 PCDHGB3Q9Y5G1 929 aa6.4□□□□□ -1.38
SSR3-208ENST00000496050 GRXCR1A8MXD5 290 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 SYT5O00445 386 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 CCNT2O60583 730 aaKnown RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 EGR1P18146 543 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 PAX3P23760 479 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 PPIFP30405 207 aaKnown RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 CXADRP78310 365 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 PPFIA1Q13136 1202 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 ZIK1Q3SY52 487 aaPredicted RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 CD300EQ496F6 205 aaPredicted RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 ERICH6BQ5W0A0 696 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 ICE2Q659A1 982 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 B3GNTL1Q67FW5 361 aaPredicted RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 SP5Q6BEB4 398 aaPredicted RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 KCTD20Q7Z5Y7 419 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 TMPRSS6Q8IU80 811 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 FAM9AQ8IZU1 332 aaPredicted RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 IPO4Q8TEX9 1081 aaKnown RBP6.39□□□□□ -1.39
SSR3-208ENST00000496050 WWC2-AS2Q96NR7 200 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 TEX101Q9BY14 249 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 MAGEH1Q9H213 219 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 CD248Q9HCU0 757 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 AKIP1Q9NQ31 210 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 TMEM74BQ9NUR3 256 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 IGSF9Q9P2J2 1179 aa6.39□□□□□ -1.39
SSR3-208ENST00000496050 A0A0B4J269 797 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 DHRS4L1P0CG22 281 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 ACRV1P26436 265 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 CD6P30203 668 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 TUBB3Q13509 450 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 PRKG1Q13976 671 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 KCNAB1Q14722 419 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 CYP2A13Q16696 494 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 RBM20Q5T481 1227 aaKnown RBP6.38□□□□□ -1.39
SSR3-208ENST00000496050 ARHGAP40Q5TG30 622 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 RAP1GAP2Q684P5 730 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 LRRC55Q6ZSA7 311 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 ANKRD18AQ8IVF6 992 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 CCDC28AQ8IWP9 274 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 SLC15A3Q8IY34 581 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 ADGRG5Q8IZF4 528 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 EID2BQ96D98 161 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 RNF31Q96EP0 1072 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 ZNF668Q96K58 619 aaPredicted RBP6.38□□□□□ -1.39
SSR3-208ENST00000496050 FAM227BQ96M60 508 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 OSBPL9Q96SU4 736 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 PRPF18Q99633 342 aaKnown RBP6.38□□□□□ -1.39
SSR3-208ENST00000496050 TMEM120AQ9BXJ8 343 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 ALOXE3Q9BYJ1 711 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 ZCWPW1Q9H0M4 648 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 INTS13Q9NVM9 706 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.38□□□□□ -1.39
SSR3-208ENST00000496050 CA14Q9ULX7 337 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 GTF2A1LQ9UNN4 478 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 HPSEQ9Y251 543 aa6.38□□□□□ -1.39
SSR3-208ENST00000496050 AQP12BA6NM10 295 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 GLP2RO95838 553 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 ITGA5P08648 1049 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 SELENOPP49908 381 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 ARL4CP56559 192 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 MC2RQ01718 297 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 PLP2Q04941 152 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 NSUN2Q08J23 767 aaKnown RBP eCLIP6.37□□□□□ -1.39
SSR3-208ENST00000496050 RESTQ13127 1097 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 CCNIQ14094 377 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 SLC5A9Q2M3M2 681 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 PTCHD3Q3KNS1 767 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 MANEALQ5VSG8 457 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 RFX8Q6ZV50 586 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 GATAD2AQ86YP4 633 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 GALNT15Q8N3T1 639 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 TMEM125Q96AQ2 219 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 EVI5LQ96CN4 794 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 NAP1L4Q99733 375 aaKnown RBP6.37□□□□□ -1.39
SSR3-208ENST00000496050 SORBS1Q9BX66 1292 aaKnown RBP6.37□□□□□ -1.39
SSR3-208ENST00000496050 AMBRA1Q9C0C7 1298 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 CXorf36Q9H7Y0 433 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 GBA2Q9HCG7 927 aaPredicted RBP6.37□□□□□ -1.39
SSR3-208ENST00000496050 PARPBPQ9NWS1 579 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 GRHPRQ9UBQ7 328 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 CNOT11Q9UKZ1 510 aaKnown RBP6.37□□□□□ -1.39
SSR3-208ENST00000496050 MAP3K2Q9Y2U5 619 aa6.37□□□□□ -1.39
SSR3-208ENST00000496050 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.37□□□□□ -1.39
SSR3-208ENST00000496050 ACKR2O00590 384 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 SNX2O60749 519 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 SRGAP2O75044 1071 aa6.36□□□□□ -1.39
SSR3-208ENST00000496050 NCR1O76036 304 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms