RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TNFAIP3P21580 790 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 FECHP22830 423 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 BCAT1P54687 386 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 RPL10AP62906 217 aaKnown RBP13.17□□□□□ -0.3
SNX17-208ENST00000493711 CYP27A1Q02318 531 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 CAMK1Q14012 370 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 PPP1R15BQ5SWA1 713 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 CCDC149Q6ZUS6 474 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 TMEM35BQ8NCS4 154 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 MSANTD4Q8NCY6 345 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 SLC2A14Q8TDB8 520 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 GDPD5Q8WTR4 605 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 STK32AQ8WU08 396 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 AUTS2Q8WXX7 1259 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 MYLPFQ96A32 169 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 CCDC42Q96M95 316 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 PPP1R9BQ96SB3 815 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 AGPAT1Q99943 283 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 B3GNT5Q9BYG0 378 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 MIS12Q9H081 205 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 HAUS4Q9H6D7 363 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 FAM49BQ9NUQ9 324 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 NME7Q9Y5B8 376 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 PTPRSQ13332 1948 aa13.17□□□□□ -0.3
SNX17-208ENST00000493711 TRIM66O15016 1216 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 NCK2O43639 380 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 POU3F3P20264 500 aaPredicted RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 BST2Q10589 180 aaKnown RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 PLD1Q13393 1074 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 ORC1Q13415 861 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 GOLGA7BQ2TAP0 167 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 PPP1R26Q5T8A7 1209 aaPredicted RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 RSPO2Q6UXX9 243 aaPredicted RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 FAM35AQ86V20 835 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 LRRTM3Q86VH5 581 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 C12orf29Q8N999 325 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 DDX1Q92499 740 aaKnown RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 FAM161BQ96MY7 647 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 BAG1Q99933 345 aaPredicted RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 DUSP16Q9BY84 665 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 DEF6Q9H4E7 631 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 PLEKHA4Q9H4M7 779 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 TLE6Q9H808 572 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 PNPLA8Q9NP80 782 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 DMAP1Q9NPF5 467 aaPredicted RBP13.16□□□□□ -0.3
SNX17-208ENST00000493711 CYLDQ9NQC7 956 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 EHD2Q9NZN4 543 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 TSPAN16Q9UKR8 245 aa13.16□□□□□ -0.3
SNX17-208ENST00000493711 WDR27A2RRH5 827 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 MTMR11A4FU01 709 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 HIDE1A8MVS5 230 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 M0QYV0 167 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 PRRG1O14668 218 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 HCRTO43612 131 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 MICAL2O94851 1124 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 OR4Q2P0C623 313 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 SRGAP2BP0DMP2 458 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 GZMAP12544 262 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 CCDC130P13994 396 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 NPR3P17342 541 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 RPL17P18621 184 aaKnown RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 ADORA2BP29275 332 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 IRS1P35568 1242 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 CYLC1P35663 651 aaPredicted RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 ADCY1Q08828 1119 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 LILRA6Q6PI73 481 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 RNF19BQ6ZMZ0 732 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 PTCD2Q8WV60 388 aaKnown RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 C8orf48Q96LL4 319 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 TMEM209Q96SK2 561 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 GAS2L1Q99501 681 aaPredicted RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 SYT11Q9BT88 431 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 NSUN3Q9H649 340 aaKnown RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 LUC7LQ9NQ29 371 aaKnown RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 KRT82Q9NSB4 513 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 COMMD8Q9NX08 183 aa13.15□□□□□ -0.3
SNX17-208ENST00000493711 ABI2Q9NYB9 513 aaPredicted RBP13.15□□□□□ -0.3
SNX17-208ENST00000493711 EPOPA6NHQ4 379 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 XPO1O14980 1071 aaKnown RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 ADAM12O43184 909 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 AKR1B10O60218 316 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 CLASP2O75122 1294 aaKnown RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 AP1G2O75843 785 aa13.14□□□□□ -0.31
SNX17-208ENST00000493711 IPO7O95373 1038 aaKnown RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 HAPLN1P10915 354 aaPredicted RBP13.14□□□□□ -0.31
SNX17-208ENST00000493711 SKILP12757 684 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms