RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 A0A1W2PQD8 194 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ZBTB24O43167 697 aaPredicted RBP7.97□□□□□ -1.13
CPNE1-226ENST00000486021 LRP3O75074 770 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 MOSPD3O75425 235 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 SMC2O95347 1197 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 TCF3P15923 654 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 PFKFB1P16118 471 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ATF6P18850 670 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CD72P21854 359 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CYP2F1P24903 491 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CTHP32929 405 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ID4P47928 161 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 NOP14P78316 857 aaKnown RBP7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CYP4F8P98187 520 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 EHHADHQ08426 723 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CUL4BQ13620 913 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 NFIL3Q16649 462 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 SOWAHAQ2M3V2 549 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 KMT5BQ4FZB7 885 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CEP135Q66GS9 1140 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ASCL5Q7RTU5 278 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 C11orf74Q86VG3 221 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 LRRTM3Q86VH5 581 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 UNC93AQ86WB7 457 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CBWD2Q8IUF1 395 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 CAMKK1Q8N5S9 505 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 SPRYD3Q8NCJ5 442 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ZBTB44Q8NCP5 570 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 FEZF2Q8TBJ5 459 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 SCFD1Q8WVM8 642 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ACDQ96AP0 544 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 OTUB2Q96DC9 234 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 PAGE5Q96GU1 130 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 C8orf48Q96LL4 319 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ZSWIM3Q96MP5 696 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 PHOX2BQ99453 314 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 MED10Q9BTT4 135 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 BLZF1Q9H2G9 400 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 TRPC7Q9HCX4 862 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 PRMT8Q9NR22 394 aaPredicted RBP7.97□□□□□ -1.13
CPNE1-226ENST00000486021 GKN1Q9NS71 199 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 DUS2Q9NX74 493 aaKnown RBP7.97□□□□□ -1.13
CPNE1-226ENST00000486021 SLC8A2Q9UPR5 921 aa7.97□□□□□ -1.13
CPNE1-226ENST00000486021 ZDBF2Q9HCK1 2354 aa7.96□□□□□ -1.13
CPNE1-226ENST00000486021 A0A1B0GVL5 298 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 TGFB1I1O43294 461 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 SOAT2O75908 522 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 RHOBTB3O94955 611 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 PAPSS2O95340 614 aaPredicted RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 PDGFRBP09619 1106 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 EPB41P11171 864 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 PTPN1P18031 435 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 BDNFP23560 247 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 ACAT1P24752 427 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 YWHAQP27348 245 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 PSMC2P35998 433 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 YWHAEP62258 255 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 LMNB2Q03252 620 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 CETN1Q12798 172 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 NCOA4Q13772 614 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 MTF1Q14872 753 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 DDR2Q16832 855 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 WDR44Q5JSH3 913 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 BTBD8Q5XKL5 378 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 LAIR1Q6GTX8 287 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 LONP2Q86WA8 852 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 NUP93Q8N1F7 819 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 B3GALNT2Q8NCR0 500 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 PARD3BQ8TEW8 1205 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 OSCP1Q8WVF1 389 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 MYLPFQ96A32 169 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 SMARCD1Q96GM5 515 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 CDK5RAP1Q96SZ6 601 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 MKNK1Q9BUB5 465 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 SLC46A2Q9BY10 475 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 NACA2Q9H009 215 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 EPC1Q9H2F5 836 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 CRISPLD1Q9H336 500 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 IL21Q9HBE4 155 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 TLR8Q9NR97 1041 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 NXF1Q9UBU9 619 aaKnown RBP7.96□□□□□ -1.14
CPNE1-226ENST00000486021 SIX4Q9UIU6 781 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 TRAF3IP3Q9Y228 551 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 R4GN57 208 aa7.96□□□□□ -1.14
CPNE1-226ENST00000486021 CACNA1IQ9P0X4 2223 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.95□□□□□ -1.14
CPNE1-226ENST00000486021 TRDMT1O14717 391 aaKnown RBP7.95□□□□□ -1.14
CPNE1-226ENST00000486021 CETN3O15182 167 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 LILRB5O75023 590 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 ALDH1A2O94788 518 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 VNN2O95498 520 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 ABL1P00519 1130 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 CST3P01034 146 aaPredicted RBP7.95□□□□□ -1.14
CPNE1-226ENST00000486021 NR3C1P04150 777 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 CHRNB1P11230 501 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 HMGA1P17096 107 aaKnown RBP7.95□□□□□ -1.14
CPNE1-226ENST00000486021 HOXA6P31267 233 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 GTF2H1P32780 548 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 PIK3CAP42336 1068 aa7.95□□□□□ -1.14
CPNE1-226ENST00000486021 PSEN1P49768 467 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms