RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 ZMYND8Q9ULU4 1186 aaPredicted RBP11.4□□□□□ -0.58
EWSR1-217ENST00000483415 SMAPO00193 183 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 ECEL1O95672 775 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 MMP13P45452 471 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 EEF1DP3Q658K8 133 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 SLC24A5Q71RS6 500 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 FAM136AQ96C01 138 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 FAM213AQ9BRX8 229 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 TRIM4Q9C037 500 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 TMEM117Q9H0C3 514 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 RAB17Q9H0T7 212 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 SIX2Q9NPC8 291 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.39□□□□□ -0.59
EWSR1-217ENST00000483415 PADI3Q9ULW8 664 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 UMODL1Q5DID0 1318 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 SCN5AQ14524 2016 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 SETSIPP0DME0 302 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 CHN1P15882 459 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 TRIM21P19474 475 aaKnown RBP11.39□□□□□ -0.59
EWSR1-217ENST00000483415 COPS2P61201 443 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 RNF220Q5VTB9 566 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 DPH6Q7L8W6 267 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 NPAS4Q8IUM7 802 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 UBR7Q8N806 425 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 SMG8Q8ND04 991 aaKnown RBP11.39□□□□□ -0.59
EWSR1-217ENST00000483415 CXorf38Q8TB03 319 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 ELAC2Q9BQ52 826 aaKnown RBP11.39□□□□□ -0.59
EWSR1-217ENST00000483415 TMEM175Q9BSA9 504 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 ZWILCHQ9H900 591 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 E7ENQ6 273 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 F8VZ95 297 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 B4GALT5O43286 388 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 PON1P27169 355 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 TMC3Q7Z5M5 1100 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 KIF2BQ8N4N8 673 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 RNF10Q8N5U6 811 aaKnown RBP11.39□□□□□ -0.59
EWSR1-217ENST00000483415 BEST2Q8NFU1 509 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 PLEKHO2Q8TD55 490 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 ZNF560Q96MR9 790 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 RPS6KC1Q96S38 1066 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 HTATIP2Q9BUP3 242 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 MRPL9Q9BYD2 267 aaKnown RBP11.39□□□□□ -0.59
EWSR1-217ENST00000483415 STK33Q9BYT3 514 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 TXLNGYQ9BZA5 131 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 APEX2Q9UBZ4 518 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 IPPQ9Y573 584 aa11.39□□□□□ -0.59
EWSR1-217ENST00000483415 UTRNP46939 3433 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 SSU72P8A0A1W2PR75 194 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 MMEP08473 750 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 SCNN1BP51168 640 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 MTMR3Q13615 1198 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 SLC10A6Q3KNW5 377 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 TRIM68Q6AZZ1 485 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 DDX42Q86XP3 938 aaKnown RBP eCLIP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 ZNF677Q86XU0 584 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 ECHDC2Q86YB7 292 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 UTP4Q969X6 686 aaKnown RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 AZIN2Q96A70 460 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 TRAPPC9Q96Q05 1148 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 PPP1R10Q96QC0 940 aaKnown RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 INTS2Q9H0H0 1204 aaKnown RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 SNX3O60493 162 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 SHBGP04278 402 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 P4HA1P13674 534 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 ACADSP16219 412 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 ATF7P17544 494 aaPredicted RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 DYNC1I2Q13409 638 aaKnown RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 TRPV6Q9H1D0 765 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 RAB20Q9NX57 234 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 GDAP2Q9NXN4 497 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 TTC3P53804 2025 aa11.38□□□□□ -0.59
EWSR1-217ENST00000483415 COL4A4P53420 1690 aaPredicted RBP11.38□□□□□ -0.59
EWSR1-217ENST00000483415 ASS1P00966 412 aaKnown RBP11.37□□□□□ -0.59
EWSR1-217ENST00000483415 ITGA4P13612 1032 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 TPP2P29144 1249 aaPredicted RBP11.37□□□□□ -0.59
EWSR1-217ENST00000483415 PPP3CAQ08209 521 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 PPIGQ13427 754 aaKnown RBP eCLIP11.37□□□□□ -0.591e-8■□□□□ 8.5
EWSR1-217ENST00000483415 TMEM132DQ14C87 1099 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 TRIM60Q495X7 471 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 MEI1Q5TIA1 1274 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 MFSD5Q6N075 450 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 TMEM199Q8N511 208 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 ZBTB45Q96K62 511 aaPredicted RBP11.37□□□□□ -0.59
EWSR1-217ENST00000483415 BCO2Q9BYV7 579 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 MMADHCQ9H3L0 296 aaPredicted RBP11.37□□□□□ -0.59
EWSR1-217ENST00000483415 HIPK3Q9H422 1215 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 ANKFY1Q9P2R3 1169 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 CTNNAL1Q9UBT7 734 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 PCDHB2Q9Y5E7 798 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 GOLGA6L10A0A0M3HER8 536 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 C1RP00736 705 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 CCNB1P14635 433 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 MFAP3P55082 362 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 RBP5P82980 135 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 C10orf76Q5T2E6 689 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 PDXDC1Q6P996 788 aa11.37□□□□□ -0.59
EWSR1-217ENST00000483415 TMEM154Q6P9G4 183 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms