RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 UNC93B1Q9H1C4 597 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 STARD7Q9NQZ5 370 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 STRIP2Q9ULQ0 834 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.56□□□□□ -1.36
CLK1-210ENST00000473565 PODXLO00592 558 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 PAPSS1O43252 624 aaPredicted RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 PSTPIP1O43586 416 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 XPOTO43592 962 aaKnown RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 B4GALT3O60512 393 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 BEST1O76090 585 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 ITGB1P05556 798 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 THP07101 528 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 COILP38432 576 aaPredicted RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 BRCC3P46736 316 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 EPHB4P54760 987 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 SV2CQ496J9 727 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 PKDCCQ504Y2 493 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 B4GALNT4Q76KP1 1039 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 RTN4RL1Q86UN2 441 aaPredicted RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 KATNAL2Q8IYT4 538 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 IPO4Q8TEX9 1081 aaKnown RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 RXFP2Q8WXD0 754 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 MCRS1Q96EZ8 462 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 CFAP57Q96MR6 1250 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 OSBPL8Q9BZF1 889 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 C10orf88Q9H8K7 445 aa6.56□□□□□ -1.36
CLK1-210ENST00000473565 SAE1Q9UBE0 346 aaPredicted RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 TDRD15B5MCY1 1934 aaKnown RBP6.56□□□□□ -1.36
CLK1-210ENST00000473565 FSCN2O14926 492 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 LRPAP1P30533 357 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MAP2K2P36507 400 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 GGCXP38435 758 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 RPL21P46778 160 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 ATXN1P54253 815 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 PTK7Q13308 1070 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 DSC3Q14574 896 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MDH1BQ5I0G3 518 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 UBAP2Q5T6F2 1119 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 TRAF7Q6Q0C0 670 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MAATS1Q7Z4T9 603 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 LINC01599Q8WXQ3 324 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 HSPH1Q92598 858 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 FAXDC2Q96IV6 333 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 SLITRK1Q96PX8 696 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PEBP4Q96S96 227 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 RHOBTB2Q9BYZ6 727 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 ADAM33Q9BZ11 813 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MAGEB5Q9BZ81 275 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 RSAD1Q9HA92 442 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 GPATCH2LQ9NWQ4 482 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 GDAP2Q9NXN4 497 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 FRMPD3Q5JV73 1810 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 LAMA3Q16787 3333 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 AGPSO00116 658 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PDGFRAP16234 1089 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 TNFRSF8P28908 595 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MIPP30301 263 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PLTPP55058 493 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 SLC25A11Q02978 314 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 PPARDQ03181 441 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 KLF1Q13351 362 aaPredicted RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 ZNF268Q14587 947 aaPredicted RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 TIGD5Q53EQ6 642 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PPP1R2P3Q6NXS1 205 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 OLFML1Q6UWY5 402 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 DSTYKQ6XUX3 929 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 RPAINQ86UA6 219 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 FUKQ8N0W3 1084 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 B3GALNT2Q8NCR0 500 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PXYLP1Q8TE99 480 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 SLC35F5Q8WV83 523 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 KHSRPQ92945 711 aaKnown RBP eCLIP6.55□□□□□ -1.365e-8■■■□□ 15.6
CLK1-210ENST00000473565 CCDC114Q96M63 670 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 ERP44Q9BS26 406 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 CFHR5Q9BXR6 569 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 CRTAC1Q9NQ79 661 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 CHST12Q9NRB3 414 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 TMEM30AQ9NV96 361 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 DDX43Q9NXZ2 648 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 MTUS1Q9ULD2 1270 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 UTP11Q9Y3A2 253 aaKnown RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 A0A0U1RQF3 1178 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MYBPHLA2RUH7 354 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 BHMG1C9JSJ3 638 aaPredicted RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 ATP8B1O43520 1251 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 B3GAT3O94766 335 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 CHRNA3P32297 505 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MAN1A1P33908 653 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PNPLA4P41247 253 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 GABRB2P47870 512 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 NDUFV1P49821 464 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 ATN1P54259 1190 aaPredicted RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 CACNA2D1P54289 1103 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 MMRN1Q13201 1228 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PIGHQ14442 188 aaPredicted RBP6.55□□□□□ -1.36
CLK1-210ENST00000473565 SCYL2Q6P3W7 929 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 SPOCD1Q6ZMY3 1216 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 PAQR9Q6ZVX9 377 aa6.55□□□□□ -1.36
CLK1-210ENST00000473565 UNC93AQ86WB7 457 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms