RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ALLCQ8N6M5 410 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 FRMD1Q8N878 549 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 FAM184AQ8NB25 1140 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 TXNDC5Q8NBS9 432 aaKnown RBP20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 FBXO18Q8NFZ0 1043 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 HMGB4Q8WW32 186 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 FNBP1Q96RU3 617 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 ASB7Q9H672 318 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 KCND2Q9NZV8 630 aa20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 MBD1Q9UIS9 605 aaPredicted RBP20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 GCN1Q92616 2671 aaKnown RBP20.4■□□□□ 0.86
NCKIPSD-209ENST00000470006 PTPRDP23468 1912 aa20.39■□□□□ 0.86
NCKIPSD-209ENST00000470006 MYMKA6NI61 221 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 LAD1O00515 517 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 OPHN1O60890 802 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 KLF8O95600 359 aaPredicted RBP20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 HDCP19113 662 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 TIE1P35590 1138 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 OPRD1P41143 372 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 P2RY2P41231 377 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 SLC12A3P55017 1021 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 MRPS21P82921 87 aaKnown RBP20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 GFPT1Q06210 699 aaPredicted RBP20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 SEMA3BQ13214 749 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 SLC23A3Q6PIS1 610 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 PIP4P1Q86T03 277 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 PROSER1Q86XN7 944 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 ZHX3Q9H4I2 956 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 C2CD2Q9Y426 696 aa20.39■□□□□ 0.85
NCKIPSD-209ENST00000470006 C2orf78A6NCI8 922 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 NOL4O94818 638 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 FAM13AO94988 1023 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 ITPKAP23677 461 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 TOB1P50616 345 aaPredicted RBP20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 DHX8Q14562 1220 aaKnown RBP20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 ADALQ6DHV7 355 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 DEFB119Q8N690 84 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 OLIG1Q8TAK6 271 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 TRMT2BQ96GJ1 504 aaKnown RBP20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 ZNF560Q96MR9 790 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 PNMA5Q96PV4 448 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 SLC6A14Q9UN76 642 aa20.38■□□□□ 0.85
NCKIPSD-209ENST00000470006 TNRC6BQ9UPQ9 1833 aaKnown RBP20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 PIGRP01833 764 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 HNRNPLP14866 589 aaKnown RBP eCLIP20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 ACAT1P24752 427 aaKnown RBP20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 PRPHP41219 470 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 MYL7Q01449 175 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 DUOXA1Q1HG43 343 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 ZNF423Q2M1K9 1284 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 PDZD3Q86UT5 571 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 SPATA2LQ8IUW3 424 aaPredicted RBP20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 MYRFLQ96LU7 910 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 DDX43Q9NXZ2 648 aaKnown RBP20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 PILRBQ9UKJ0 227 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 GTF3C4Q9UKN8 822 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 CEP192Q8TEP8 1941 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 ANAPC1Q9H1A4 1944 aa20.37■□□□□ 0.85
NCKIPSD-209ENST00000470006 FREM2Q5SZK8 3169 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 EIF4E1BA6NMX2 242 aaKnown RBP20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 UPK3BL1B0FP48 263 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 UPK3BL2E5RIL1 263 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 SGK1O00141 431 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 HUS1O60921 280 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 APODP05090 189 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 KRT18P05783 430 aaKnown RBP20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 PDE6CP51160 858 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 FAM193AP78312 1265 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 SCAPQ12770 1279 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 SOWAHCQ53LP3 525 aaPredicted RBP20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 ARSHQ5FYA8 562 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 EOGTQ5NDL2 527 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 GPBP1Q86WP2 473 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 SPRYD3Q8NCJ5 442 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 CEP76Q8TAP6 659 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 SPATA18Q8TC71 538 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 LRRC15Q8TF66 581 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 PNKPQ96T60 521 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 REEP2Q9BRK0 252 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 CCSER1Q9C0I3 900 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 ABCB6Q9NP58 842 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 GCNT4Q9P109 453 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 AGO2Q9UKV8 859 aaKnown RBP20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 ODF2LQ9ULJ1 636 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 ARHGAP26Q9UNA1 814 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 GPSM3Q9Y4H4 160 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 PCDHB9Q9Y5E1 797 aa20.36■□□□□ 0.85
NCKIPSD-209ENST00000470006 LAMA5O15230 3695 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 TCRBV21S2A2A0A5A6 115 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 AP5Z1O43299 807 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 SCP2P22307 547 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 PNPLA4P41247 253 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 SLC6A11P48066 632 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 RPL6Q02878 288 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 COL28A1Q2UY09 1125 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 INTS6LQ5JSJ4 861 aaKnown RBP20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 SPDYCQ5MJ68 293 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 SLC39A4Q6P5W5 647 aa20.35■□□□□ 0.85
NCKIPSD-209ENST00000470006 FILIP1Q7Z7B0 1213 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms