RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 TTYH1Q9H313 450 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 HSFX1Q9UBD0 423 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 MAFFQ9ULX9 164 aa15.5■□□□□ 0.07
SHANK2-210ENST00000449116 COL4A4P53420 1690 aaPredicted RBP15.5■□□□□ 0.07
SHANK2-210ENST00000449116 CHD9Q3L8U1 2897 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 SOWAHDA6NJG2 315 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 DDX3XO00571 662 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHANK2-210ENST00000449116 AKR1B10O60218 316 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 AP1G2O75843 785 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 VNN2O95498 520 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 C1RP00736 705 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 CYP1A1P04798 512 aaPredicted RBP15.49■□□□□ 0.07
SHANK2-210ENST00000449116 SETSIPP0DME0 302 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 ATF2P15336 505 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 CYP2F1P24903 491 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 CDH5P33151 784 aaPredicted RBP15.49■□□□□ 0.07
SHANK2-210ENST00000449116 GPD2P43304 727 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 MAGEA11P43364 429 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 ZNF697Q5TEC3 545 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 DENND1BQ6P3S1 775 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 CLEC20AQ6ZU45 233 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 SLC30A5Q8TAD4 765 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 SECISBP2LQ93073 1101 aaKnown RBP15.49■□□□□ 0.07
SHANK2-210ENST00000449116 RHOBTB2Q9BYZ6 727 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 ADAMTS1Q9UHI8 967 aa15.49■□□□□ 0.07
SHANK2-210ENST00000449116 TGM5O43548 720 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CLASP2O75122 1294 aaKnown RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 GLUD1P00367 558 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 HAPLN1P10915 354 aaPredicted RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CYLC1P35663 651 aaPredicted RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 GRIK1P39086 918 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 TUFMP49411 452 aaKnown RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CLCN4P51793 760 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 KIF11P52732 1056 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 NOMO3P69849 1222 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CCZ1BP86790 482 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CCZ1P86791 482 aaPredicted RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 PDE4CQ08493 712 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 DUSP4Q13115 394 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 SLC18A3Q16572 532 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CLEC16AQ2KHT3 1053 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 LILRA6Q6PI73 481 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 TMEM35BQ8NCS4 154 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 C1orf131Q8NDD1 294 aaKnown RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 PPP2R3CQ969Q6 453 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 LRCH3Q96II8 777 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 SMOQ99835 787 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CSNK1G1Q9HCP0 422 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 DMAP1Q9NPF5 467 aaPredicted RBP15.48■□□□□ 0.07
SHANK2-210ENST00000449116 FBXW11Q9UKB1 542 aa15.48■□□□□ 0.07
SHANK2-210ENST00000449116 CHD7Q9P2D1 2997 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 A0A087X0T9 212 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 XPO1O14980 1071 aaKnown RBP15.47■□□□□ 0.07
SHANK2-210ENST00000449116 TRIM66O15016 1216 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 ARHGAP6O43182 974 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 BEST1O76090 585 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 FAM228BP0C875 321 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 GZMAP12544 262 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 UNGP13051 313 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-210ENST00000449116 ELF1P32519 619 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 PLA2G4AP47712 749 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 CACNA2D1P54289 1103 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 MAP3K7CLP57077 242 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 GFPT1Q06210 699 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-210ENST00000449116 GRIN2CQ14957 1233 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 MGAT5BQ3V5L5 792 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 NAA35Q5VZE5 725 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 PPP1R2P3Q6NXS1 205 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 ADGRD2Q7Z7M1 963 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 SCN4BQ8IWT1 228 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 TCEAL8Q8IYN2 117 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 WDTC1Q8N5D0 677 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 ZMIZ2Q8NF64 920 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 SLC35F5Q8WV83 523 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 C8orf48Q96LL4 319 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 NOX5Q96PH1 765 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 SEPT5Q99719 369 aaPredicted RBP15.47■□□□□ 0.07
SHANK2-210ENST00000449116 UBXN6Q9BZV1 441 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 CRISPLD1Q9H336 500 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 PRDM12Q9H4Q4 367 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 CYP4F11Q9HBI6 524 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 TMEM30AQ9NV96 361 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 LMCD1Q9NZU5 365 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 SLC27A5Q9Y2P5 690 aa15.47■□□□□ 0.07
SHANK2-210ENST00000449116 F8VP50 259 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 TULP2O00295 520 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 PER2O15055 1255 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 SEC24AO95486 1093 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 NSFP46459 744 aaKnown RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 RPL10AP62906 217 aaKnown RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 CENPCQ03188 943 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 PDCLQ13371 301 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 MTF1Q14872 753 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 DUSP6Q16828 381 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 ALKBH5Q6P6C2 394 aaKnown RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 RAD9BQ6WBX8 426 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 RBM23Q86U06 439 aaKnown RBP15.46■□□□□ 0.07
SHANK2-210ENST00000449116 PIGZQ86VD9 579 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 TTC9BQ8N6N2 239 aa15.46■□□□□ 0.07
SHANK2-210ENST00000449116 KREMEN2Q8NCW0 462 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms