RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 NDRG2Q9UN36 371 aaKnown RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 MTF2Q9Y483 593 aaPredicted RBP18.76■□□□□ 0.59
NUP50-208ENST00000430547 SOBPA7XYQ1 873 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 SMC2O95347 1197 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 GLULP15104 373 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 PTPN1P18031 435 aaKnown RBP18.75■□□□□ 0.59
NUP50-208ENST00000430547 PSMC2P35998 433 aaKnown RBP18.75■□□□□ 0.59
NUP50-208ENST00000430547 NBL1P41271 181 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 ADAM9Q13443 819 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 SGSM1Q2NKQ1 1148 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 ZACNQ401N2 412 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 TXNDC8Q6A555 127 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 C1orf228Q6PIY5 440 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 TMEM150AQ86TG1 271 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 B3GALNT2Q8NCR0 500 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 FAM3CQ92520 227 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 MSANTD3Q96H12 275 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 MYRFLQ96LU7 910 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 CEP295NLQ96MC4 621 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 ELOVL4Q9GZR5 314 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 SMG9Q9H0W8 520 aaKnown RBP18.75■□□□□ 0.59
NUP50-208ENST00000430547 SMYD3Q9H7B4 428 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 KIF9Q9HAQ2 790 aa18.75■□□□□ 0.59
NUP50-208ENST00000430547 ATP8B3O60423 1300 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 F5P12259 2224 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 CACNA1IQ9P0X4 2223 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 LAMTOR5O43504 91 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 GFRA3O60609 400 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 VNN1O95497 513 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 TRIM21P19474 475 aaKnown RBP18.74■□□□□ 0.59
NUP50-208ENST00000430547 DENND5BQ6ZUT9 1274 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 SV2AQ7L0J3 742 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 FRMD5Q7Z6J6 570 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 MON1AQ86VX9 555 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 SMYD4Q8IYR2 804 aaPredicted RBP18.74■□□□□ 0.59
NUP50-208ENST00000430547 TAF4BQ92750 862 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 ZFYVE19Q96K21 471 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 TNIP3Q96KP6 325 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 SPATA17Q96L03 361 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 GSDMAQ96QA5 445 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 DPEP3Q9H4B8 488 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 C8orf33Q9H7E9 229 aaPredicted RBP18.74■□□□□ 0.59
NUP50-208ENST00000430547 TDP1Q9NUW8 608 aa18.74■□□□□ 0.59
NUP50-208ENST00000430547 ARNTLO00327 626 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 AKAP3O75969 853 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 CKMP06732 381 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 CCNE1P24864 410 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 RPS9P46781 194 aaKnown RBP18.73■□□□□ 0.59
NUP50-208ENST00000430547 RAP1GAPP47736 663 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 MLLT6P55198 1093 aaPredicted RBP18.73■□□□□ 0.59
NUP50-208ENST00000430547 CDH8P55286 799 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 EDRF1Q3B7T1 1238 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 CC2D1AQ6P1N0 951 aaPredicted RBP18.73■□□□□ 0.59
NUP50-208ENST00000430547 ZC3H14Q6PJT7 736 aaKnown RBP18.73■□□□□ 0.59
NUP50-208ENST00000430547 CCDC150Q8NCX0 1101 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 NKD2Q969F2 451 aaPredicted RBP18.73■□□□□ 0.59
NUP50-208ENST00000430547 SMARCE1Q969G3 411 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 TSG101Q99816 390 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 MED10Q9BTT4 135 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
NUP50-208ENST00000430547 MMRN2Q9H8L6 949 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 FANCMQ8IYD8 2048 aa18.73■□□□□ 0.59
NUP50-208ENST00000430547 TRAV19A0A0A6YYK7 116 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 PROB1E7EW31 1015 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 F8VP50 259 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 TADA3O75528 432 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 HLA-DRAP01903 254 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 USP17L7P0C7H9 530 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 TRIM49P0CI25 452 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 TRIM49CP0CI26 452 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 EPB41P11171 864 aaKnown RBP18.72■□□□□ 0.59
NUP50-208ENST00000430547 PDE6CP51160 858 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 ZNF658Q5TYW1 1059 aaPredicted RBP18.72■□□□□ 0.59
NUP50-208ENST00000430547 TTC16Q8NEE8 873 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 ENGASEQ8NFI3 743 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 USP13Q92995 863 aaPredicted RBP18.72■□□□□ 0.59
NUP50-208ENST00000430547 CLDN23Q96B33 292 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 TIGD1Q96MW7 591 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 LRRC3BQ96PB8 259 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 NME7Q9Y5B8 376 aa18.72■□□□□ 0.59
NUP50-208ENST00000430547 CETN3O15182 167 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 KINO60870 393 aaKnown RBP18.71■□□□□ 0.59
NUP50-208ENST00000430547 ASS1P00966 412 aaKnown RBP18.71■□□□□ 0.59
NUP50-208ENST00000430547 GCLMP48507 274 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 ENPEPQ07075 957 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 ZNF268Q14587 947 aaPredicted RBP18.71■□□□□ 0.59
NUP50-208ENST00000430547 ZCWPW2Q504Y3 356 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 RALGPS2Q86X27 583 aaPredicted RBP18.71■□□□□ 0.59
NUP50-208ENST00000430547 TTC8Q8TAM2 541 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 ELMO3Q96BJ8 720 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 C8orf48Q96LL4 319 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 ZNF518BQ9C0D4 1074 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 GTSE1Q9NYZ3 720 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 TRPM5Q9NZQ8 1165 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 CCL26Q9Y258 94 aa18.71■□□□□ 0.59
NUP50-208ENST00000430547 SPECC1L-ADORA2AF8WAN1 911 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 CLDN5O00501 218 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 STX10O60499 249 aa18.7■□□□□ 0.58
NUP50-208ENST00000430547 SP9P0CG40 484 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms