RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CXCL12P48061 93 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 AP3M2P53677 418 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 DLG4P78352 724 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 RUNX3Q13761 415 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 NCOA4Q13772 614 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 BECN1Q14457 450 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 PPP2R5DQ14738 602 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 ZNF699Q32M78 642 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 ZNF528Q3MIS6 628 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 ZNF667Q5HYK9 610 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 TDRD10Q5VZ19 366 aaKnown RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 C1orf228Q6PIY5 440 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 TXNDC11Q6PKC3 985 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 VSTM1Q6UX27 236 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 SCARA5Q6ZMJ2 495 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 KRBA2Q6ZNG9 492 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 RALGPS2Q86X27 583 aaPredicted RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 ZNF687Q8N1G0 1237 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 DCLK2Q8N568 766 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 ARL14EPQ8N8R7 260 aaPredicted RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 PARD3BQ8TEW8 1205 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 TRMT2BQ96GJ1 504 aaKnown RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 MSANTD3Q96H12 275 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 PCED1BQ96HM7 432 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 GZF1Q9H116 711 aaPredicted RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 CHRDQ9H2X0 955 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 KCTD10Q9H3F6 313 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 DPEP3Q9H4B8 488 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 EBF3Q9H4W6 596 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.91□□□□□ -0.829e-9■■■■■ 111.8
NUP50-206ENST00000422489 DMAC2Q9NW81 257 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 ZSCAN32Q9NX65 697 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 TRPM5Q9NZQ8 1165 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 FRMD4BQ9Y2L6 1034 aa9.91□□□□□ -0.82
NUP50-206ENST00000422489 ZFHX2Q9C0A1 2572 aaPredicted RBP9.91□□□□□ -0.82
NUP50-206ENST00000422489 NOTCH4Q99466 2003 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 A0A1W2PQ27 194 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 A0A1W2PQ64 194 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 A0A1W2PQD8 194 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 C2orf78A6NCI8 922 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 GOLGA6L4A6NEF3 574 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 SOBPA7XYQ1 873 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 F8VP50 259 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 TRIM66O15016 1216 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 ZNF202O95125 648 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 ARSAP15289 507 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 CTHP32929 405 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 CCR3P51677 355 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 KCNB1Q14721 858 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 SGSM1Q2NKQ1 1148 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 DGKKQ5KSL6 1271 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 DENND5BQ6ZUT9 1274 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 SLC9A9Q8IVB4 645 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 KIAA2013Q8IYS2 634 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 SPATA17Q96L03 361 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 C8orf48Q96LL4 319 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 MYRFLQ96LU7 910 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 SLC22A12Q96S37 553 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 FAM83CQ9BQN1 747 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 B3GNT5Q9BYG0 378 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 XYLT2Q9H1B5 865 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 GOLPH3LQ9H4A5 285 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 SMYD3Q9H7B4 428 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 MMRN2Q9H8L6 949 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 KIF9Q9HAQ2 790 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 DUS2Q9NX74 493 aaKnown RBP9.9□□□□□ -0.82
NUP50-206ENST00000422489 EHD2Q9NZN4 543 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 FARP1Q9Y4F1 1045 aaPredicted RBP9.9□□□□□ -0.82
NUP50-206ENST00000422489 NME7Q9Y5B8 376 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 PCDHGA2Q9Y5H1 932 aa9.9□□□□□ -0.82
NUP50-206ENST00000422489 DOCK6Q96HP0 2047 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 FAM237AA0A1B0GTK4 181 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 TADA3O75528 432 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 RHOBTB3O94955 611 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 VNN1O95497 513 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 STAU1O95793 577 aaKnown RBP9.89□□□□□ -0.83
NUP50-206ENST00000422489 KRT13P13646 458 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 P4HA1P13674 534 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 IFNAR2P48551 515 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 GALK1P51570 392 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 VAMP7P51809 220 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 NRLP54845 237 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 USP46P62068 366 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 AMPD2Q01433 879 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 SATB1Q01826 763 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 FAM160A1Q05DH4 1040 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 GRSF1Q12849 480 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP50-206ENST00000422489 DPYDQ12882 1025 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 ORC1Q13415 861 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 GAS6Q14393 721 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 ZNF268Q14587 947 aaPredicted RBP9.89□□□□□ -0.83
NUP50-206ENST00000422489 MTF1Q14872 753 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 PDGFRLQ15198 375 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 HEATR6Q6AI08 1181 aaKnown RBP9.89□□□□□ -0.83
NUP50-206ENST00000422489 Q6ZS52 159 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 SV2AQ7L0J3 742 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 ACOT1Q86TX2 421 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 SPEM1Q8N4L4 309 aa9.89□□□□□ -0.83
NUP50-206ENST00000422489 B3GALNT2Q8NCR0 500 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms