RNA–Protein interactions for RNA: ENST00000420489.6

CNGA1-203, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CNGA1, Length 2,746 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-203ENST00000420489 NYAP2Q9P242 653 aa4.24□□□□□ -1.73
CNGA1-203ENST00000420489 NUP210Q8TEM1 1887 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PI4KAP2A4QPH2 592 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 GFRA2O00451 464 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 MPHOSPH10O00566 681 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 HEXAP06865 529 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CNPP09543 421 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 SMIM10L2AP0DMW4 78 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 SMIM10L2BP0DMW5 78 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 TCF3P15923 654 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 LTBQ06643 244 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CWF19L2Q2TBE0 894 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ZFYVE27Q5T4F4 411 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CCDC30Q5VVM6 783 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 BHLHB9Q6PI77 547 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 RELL1Q8IUW5 271 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PI4KAP1Q8N8J0 262 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 UBXN4Q92575 508 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PMM1Q92871 262 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 DUSP9Q99956 384 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 FBXW11Q9UKB1 542 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PCDHGA7Q9Y5G6 932 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ANKRD33BA6NCL7 494 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 SPECC1L-ADORA2AF8WAN1 911 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CREB3O43889 395 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 FBXO24O75426 580 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 BPNT1O95861 308 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 SOD2P04179 222 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PGRP06401 933 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 GLI1P08151 1106 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ATXN1LP0C7T5 689 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CD82P27701 267 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 SREBF1P36956 1147 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 MATKP42679 507 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 DGKEP52429 567 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PAK2Q13177 524 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ART3Q13508 389 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 INPP5AQ14642 412 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 RAB3GAP1Q15042 981 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 METTL24Q5JXM2 366 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 WDR45BQ5MNZ6 344 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 MKL1Q969V6 931 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 TMEM87BQ96K49 555 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 POLR1BQ9H9Y6 1135 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 RNF19AQ9NV58 838 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 SPEGQ15772 3267 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CCDC171Q6TFL3 1326 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 MYH8P13535 1937 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CEP295Q9C0D2 2601 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ZNF106Q9H2Y7 1883 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 A0A1B0GTW7 788 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 M0QZ92 97 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ALDH1L1O75891 902 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 FGF19O95750 216 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 DHPSP49366 369 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 GRSF1Q12849 480 aaKnown RBP eCLIP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CCDC184Q52MB2 194 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PKN3Q6P5Z2 889 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PRIMA1Q86XR5 153 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 MCATQ8IVS2 390 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 CHURC1Q8WUH1 139 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ZMYND19Q96E35 227 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 KIRREL1Q96J84 757 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 HSPA12BQ96MM6 686 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 RSRP1Q9BUV0 290 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 EPB41L4AQ9HCS5 686 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 RNF146Q9NTX7 359 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 MAP3K20Q9NYL2 800 aaKnown RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ADAMTS1Q9UHI8 967 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 ZNF215Q9UL58 517 aaPredicted RBP4.23□□□□□ -1.73
CNGA1-203ENST00000420489 RIPK3Q9Y572 518 aa4.23□□□□□ -1.73
CNGA1-203ENST00000420489 PTPDC1A2A3K4 754 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 SCAMP1O15126 338 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 THBS2P35442 1172 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 CNTN2Q02246 1040 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 DSG1Q02413 1049 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 PDCD2Q16342 344 aaPredicted RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 TMEM201Q5SNT2 666 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 TMEM63BQ5T3F8 832 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 SYCP2LQ5T4T6 812 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 ATG9AQ7Z3C6 839 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 DNASE2BQ8WZ79 361 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 CARS2Q9HA77 564 aaKnown RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 ASCL3Q9NQ33 180 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 FTSJ1Q9UET6 329 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 TBX20Q9UMR3 447 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 CDRT15L2A8MXV6 281 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 TSPAN3O60637 253 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 PPP2R1AP30153 589 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 CHMP4BP1P59074 171 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 SEPT2Q15019 361 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 ZYXQ15942 572 aaKnown RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 USP53Q70EK8 1073 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 SIAH1Q8IUQ4 282 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 LILRA2Q8N149 483 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 REXO1Q8N1G1 1221 aaKnown RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 SDR16C5Q8N3Y7 309 aa4.22□□□□□ -1.73
CNGA1-203ENST00000420489 ENAHQ8N8S7 591 aaPredicted RBP4.22□□□□□ -1.73
CNGA1-203ENST00000420489 DEPDC7Q96QD5 511 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms