RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 SERPINC1P01008 464 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CD4P01730 458 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 IFNA16P05015 189 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CYP1A2P05177 515 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 SSBP05455 408 aaKnown RBP eCLIP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TPBGLP0DKB5 382 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CHRNB1P11230 501 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PABPC1P11940 636 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 KRT3P12035 628 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 NCAM1P13591 858 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 EEF2P13639 858 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 KRT10P13645 584 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 KRT5P13647 590 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 P4HA1P13674 534 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 STMN1P16949 149 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CDH3P22223 829 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GNA11P29992 359 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 IFNA8P32881 189 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PSMC2P35998 433 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 STAT3P40763 770 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ASPAP45381 313 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 RAB14P61106 215 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 VBP1P61758 197 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 RPP38P78345 283 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CYP4F8P98187 520 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GRIN1Q05586 938 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GFPT1Q06210 699 aaPredicted RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 SPAG1Q07617 926 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ASPHQ12797 758 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 P3H1Q32P28 736 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 AKAP4Q5JQC9 854 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TTBK2Q6IQ55 1244 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 METTL2BQ6P1Q9 378 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ZNF449Q6P9G9 518 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 Q6ZUG5 572 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 MCM10Q7L590 875 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GSTA5Q7RTV2 222 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TRAPPC11Q7Z392 1133 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GALNT7Q86SF2 657 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ADGRG6Q86SQ4 1221 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ADAMTSL2Q86TH1 951 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 STK32CQ86UX6 486 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 FAM124AQ86V42 546 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC25Q86WR0 208 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC28AQ8IWP9 274 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 UBE2J2Q8N2K1 259 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TMCO5AQ8N6Q1 288 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PDZD8Q8NEN9 1154 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PJA1Q8NG27 643 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 OR10Z1Q8NGY1 313 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 LILRB4Q8NHJ6 448 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 LRRC8CQ8TDW0 803 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ATXN2LQ8WWM7 1075 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 STMN2Q93045 179 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ABTB1Q969K4 478 aaPredicted RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 INTS12Q96CB8 462 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CLIP3Q96DZ5 547 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 METTL2AQ96IZ6 378 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PGBD1Q96JS3 809 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PBKQ96KB5 322 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 NLRP4Q96MN2 994 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 C7orf26Q96N11 449 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TEPSINQ96N21 525 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ACAP3Q96P50 834 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 MED15Q96RN5 788 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PNKPQ96T60 521 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 SELENOSQ9BQE4 189 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PSD2Q9BQI7 771 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CCDC77Q9BR77 488 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 LLPHQ9BRT6 129 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TDRD1Q9BXT4 1180 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CHRDQ9H2X0 955 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GGNBP2Q9H3C7 697 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 UCK1Q9HA47 277 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 NLRC4Q9NPP4 1024 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 VPS45Q9NRW7 570 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 USP40Q9NVE5 1235 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 TBC1D14Q9P2M4 693 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 KANSL3Q9P2N6 904 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 STX18Q9P2W9 335 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 GABBR1Q9UBS5 961 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 APEX2Q9UBZ4 518 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 PLAGL2Q9UPG8 496 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 ERVK-11Q9UQG0 969 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CNPY2Q9Y2B0 182 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 IPPQ9Y573 584 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 CSNK1G3Q9Y6M4 447 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 SLC4A4Q9Y6R1 1079 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 NESP48681 1621 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 EIF2AK4Q9P2K8 1649 aaKnown RBP3.78□□□□□ -1.8
XRCC4-203ENST00000396027 DAPK1P53355 1430 aa3.78□□□□□ -1.8
XRCC4-203ENST00000396027 SBNO2Q9Y2G9 1366 aa3.78□□□□□ -1.81
XRCC4-203ENST00000396027 WDR62O43379 1518 aa3.77□□□□□ -1.81
XRCC4-203ENST00000396027 URB2Q14146 1524 aaKnown RBP3.77□□□□□ -1.81
XRCC4-203ENST00000396027 MAGI3Q5TCQ9 1506 aa3.77□□□□□ -1.81
XRCC4-203ENST00000396027 MAP3K19Q56UN5 1328 aa3.77□□□□□ -1.81
XRCC4-203ENST00000396027 MYO3BQ8WXR4 1341 aa3.77□□□□□ -1.81
XRCC4-203ENST00000396027 TCHHQ07283 1943 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms